FFCP PHASE1:Mm9::chr16:45224470..45224477,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1496|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:45224470..45224477,+|id=chr16:45224470..45224477,+|ontology_enrichment_celltype=CL:0000791!2.16e-12!9;CL:0000789!2.16e-12!9;CL:0002420!2.16e-12!9;CL:0002419!2.16e-12!9;CL:0000790!2.16e-12!9;CL:0000624!3.10e-11!8;CL:0002031!3.22e-11!25;CL:0000838!7.47e-11!12;CL:0000988!6.66e-10!32;CL:0002032!6.66e-10!32;CL:0000037!6.66e-10!32;CL:0000566!6.66e-10!32;CL:0000837!6.66e-10!32;CL:0000542!8.80e-10!13;CL:0000051!8.80e-10!13;CL:0000084!1.20e-09!11;CL:0000827!1.20e-09!11;CL:0000893!5.35e-09!6;CL:0002489!5.35e-09!6;CL:0000898!5.35e-09!6;CL:0000809!5.35e-09!6;CL:0000810!5.35e-09!6;CL:0000895!5.35e-09!6;CL:0000808!5.35e-09!6;CL:0000894!5.35e-09!6;CL:0000806!5.35e-09!6;CL:0000807!5.35e-09!6;CL:0000805!5.35e-09!6;CL:0002425!5.35e-09!6;CL:0002436!5.35e-09!6;CL:0002427!5.35e-09!6;CL:0002428!5.35e-09!6;CL:0002429!5.35e-09!6;CL:0002433!5.35e-09!6;CL:0002431!5.35e-09!6;CL:0002432!5.35e-09!6;CL:0000553!2.09e-08!6;CL:0000556!2.09e-08!6;CL:0000738!8.59e-07!17;CL:0002087!8.59e-07!17|ontology_enrichment_celltype_v019_2=CL:0002031,7.98e-29,25;CL:0000791,5.59e-28,9;CL:0000789,5.59e-28,9;CL:0002420,5.59e-28,9;CL:0002419,5.59e-28,9;CL:0000790,5.59e-28,9;CL:0000838,3.63e-27,12;CL:0000542,5.13e-25,13;CL:0000051,5.13e-25,13;CL:0000624,1.35e-23,8;CL:0000084,8.57e-23,11;CL:0000827,8.57e-23,11;CL:0000893,1.84e-22,6;CL:0002489,1.84e-22,6;CL:0000898,1.84e-22,6;CL:0000809,1.84e-22,6;CL:0000810,1.84e-22,6;CL:0000895,1.84e-22,6;CL:0000808,1.84e-22,6;CL:0000894,1.84e-22,6;CL:0000806,1.84e-22,6;CL:0000807,1.84e-22,6;CL:0000805,1.84e-22,6;CL:0002425,1.84e-22,6;CL:0002436,1.84e-22,6;CL:0002427,1.84e-22,6;CL:0002428,1.84e-22,6;CL:0002429,1.84e-22,6;CL:0002433,1.84e-22,6;CL:0002431,1.84e-22,6;CL:0002432,1.84e-22,6;CL:0000988,3.56e-22,32;CL:0002032,3.56e-22,32;CL:0000037,3.56e-22,32;CL:0000837,3.56e-22,32;CL:0000738,6.16e-19,17;CL:0002087,6.16e-19,17;CL:0002320,6.31e-15,46;CL:0000134,6.31e-15,46;CL:0000553,1.50e-14,6;CL:0000556,1.50e-14,6;CL:0000219,1.83e-12,54;CL:0000050,9.14e-10,9;CL:0000839,8.41e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.85e-20!48;UBERON:0002390!1.51e-18!45;UBERON:0003061!1.51e-18!45;UBERON:0002405!1.64e-17!70;UBERON:0004177!3.09e-16!29;UBERON:0003408!3.50e-13!24;UBERON:0005057!6.31e-13!51;UBERON:0006562!7.81e-13!24;UBERON:0001557!7.81e-13!24;UBERON:0001042!7.81e-13!24;UBERON:0008814!7.81e-13!24;UBERON:0009145!7.81e-13!24;UBERON:0002370!3.79e-12!23;UBERON:0000974!3.79e-12!23;UBERON:0004807!3.79e-12!23;UBERON:0005058!3.79e-12!23;UBERON:0003351!3.79e-12!23;UBERON:0009113!3.79e-12!23;UBERON:0003295!3.79e-12!23;UBERON:0009722!3.79e-12!23;UBERON:0005562!3.79e-12!23;UBERON:0007690!3.79e-12!23;UBERON:0001041!7.04e-12!92;UBERON:0001004!7.50e-12!42;UBERON:0000077!2.22e-11!97;UBERON:0000065!5.47e-11!41;UBERON:0000072!8.51e-11!27;UBERON:0003081!2.92e-09!88;UBERON:0003104!3.92e-09!131;UBERON:0009142!3.92e-09!131;UBERON:0001007!1.51e-08!128;UBERON:0001555!1.51e-08!128;UBERON:0007026!1.51e-08!128;UBERON:0004921!2.77e-08!126;UBERON:0004185!2.77e-08!126;UBERON:0004119!3.17e-08!130;UBERON:0000925!3.17e-08!130;UBERON:0006595!3.17e-08!130;UBERON:0000926!3.62e-08!193;UBERON:0004120!3.62e-08!193;UBERON:0006603!3.62e-08!193;UBERON:0005911!1.00e-07!69;UBERON:0000063!3.77e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.97e-17,48;UBERON:0002405,5.97e-17,48;UBERON:0002390,2.70e-15,45;UBERON:0003061,2.70e-15,45;UBERON:0002384,6.31e-15,46;UBERON:0004177,9.84e-11,29;UBERON:0005057,9.84e-11,29;UBERON:0003408,3.91e-10,24;UBERON:0000077,9.84e-09,35;UBERON:0002370,5.44e-08,23;UBERON:0000974,5.44e-08,23;UBERON:0004807,5.44e-08,23;UBERON:0005058,5.44e-08,23;UBERON:0003351,5.44e-08,23;UBERON:0009113,5.44e-08,23;UBERON:0003295,5.44e-08,23;UBERON:0009722,5.44e-08,23;UBERON:0005562,5.44e-08,23;UBERON:0007690,5.44e-08,23;UBERON:0006562,1.22e-07,24;UBERON:0001557,1.22e-07,24;UBERON:0001042,1.22e-07,24;UBERON:0008814,1.22e-07,24;UBERON:0009145,1.22e-07,24;UBERON:0003081,4.56e-07,87;UBERON:0000029,6.50e-07,1;UBERON:0001097,6.50e-07,1;UBERON:0003968,6.50e-07,1;UBERON:0001467,6.50e-07,1;UBERON:0000072,9.74e-07,27|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,5.77233760821834,3.04283884218592,7.19115466547121,2.39316476986009,2.22560948910567,0.611942816932982,0.333109761815663,0.607425802169478,2.09868563438444,2.5236973228659,4.38766187538364,5.51706547337439,0,0,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,2.51673909086605,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,5.95557132388495,0.148442139064825,0,0,0,0,0,0,0,0.433798070759735,0.884610551949874,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0.608580364165509,0,0,0,0.324270453550071,0,0,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0.476087281772027,0,0,0,0.159454768657487,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70870880797853,0,0.185194527369712,0.941842285023455,1.6403307326523,0.915112692826091,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0.129920822977795,0,0.39736270956253,0.360586348559907,0.443068581523732,0.403865799792591,0.381034033274999,0.201652370273681,0.682205165178267,0.288635524920988,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p@chr16:45224470..45224477,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1496 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:45224470..45224477,+ | |||
|id=chr16:45224470..45224477,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.16e-12!9;CL:0000789!2.16e-12!9;CL:0002420!2.16e-12!9;CL:0002419!2.16e-12!9;CL:0000790!2.16e-12!9;CL:0000624!3.10e-11!8;CL:0002031!3.22e-11!25;CL:0000838!7.47e-11!12;CL:0000988!6.66e-10!32;CL:0002032!6.66e-10!32;CL:0000037!6.66e-10!32;CL:0000566!6.66e-10!32;CL:0000837!6.66e-10!32;CL:0000542!8.80e-10!13;CL:0000051!8.80e-10!13;CL:0000084!1.20e-09!11;CL:0000827!1.20e-09!11;CL:0000893!5.35e-09!6;CL:0002489!5.35e-09!6;CL:0000898!5.35e-09!6;CL:0000809!5.35e-09!6;CL:0000810!5.35e-09!6;CL:0000895!5.35e-09!6;CL:0000808!5.35e-09!6;CL:0000894!5.35e-09!6;CL:0000806!5.35e-09!6;CL:0000807!5.35e-09!6;CL:0000805!5.35e-09!6;CL:0002425!5.35e-09!6;CL:0002436!5.35e-09!6;CL:0002427!5.35e-09!6;CL:0002428!5.35e-09!6;CL:0002429!5.35e-09!6;CL:0002433!5.35e-09!6;CL:0002431!5.35e-09!6;CL:0002432!5.35e-09!6;CL:0000553!2.09e-08!6;CL:0000556!2.09e-08!6;CL:0000738!8.59e-07!17;CL:0002087!8.59e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002031,7.98e-29,25;CL:0000791,5.59e-28,9;CL:0000789,5.59e-28,9;CL:0002420,5.59e-28,9;CL:0002419,5.59e-28,9;CL:0000790,5.59e-28,9;CL:0000838,3.63e-27,12;CL:0000542,5.13e-25,13;CL:0000051,5.13e-25,13;CL:0000624,1.35e-23,8;CL:0000084,8.57e-23,11;CL:0000827,8.57e-23,11;CL:0000893,1.84e-22,6;CL:0002489,1.84e-22,6;CL:0000898,1.84e-22,6;CL:0000809,1.84e-22,6;CL:0000810,1.84e-22,6;CL:0000895,1.84e-22,6;CL:0000808,1.84e-22,6;CL:0000894,1.84e-22,6;CL:0000806,1.84e-22,6;CL:0000807,1.84e-22,6;CL:0000805,1.84e-22,6;CL:0002425,1.84e-22,6;CL:0002436,1.84e-22,6;CL:0002427,1.84e-22,6;CL:0002428,1.84e-22,6;CL:0002429,1.84e-22,6;CL:0002433,1.84e-22,6;CL:0002431,1.84e-22,6;CL:0002432,1.84e-22,6;CL:0000988,3.56e-22,32;CL:0002032,3.56e-22,32;CL:0000037,3.56e-22,32;CL:0000837,3.56e-22,32;CL:0000738,6.16e-19,17;CL:0002087,6.16e-19,17;CL:0002320,6.31e-15,46;CL:0000134,6.31e-15,46;CL:0000553,1.50e-14,6;CL:0000556,1.50e-14,6;CL:0000219,1.83e-12,54;CL:0000050,9.14e-10,9;CL:0000839,8.41e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.85e-20!48;UBERON:0002390!1.51e-18!45;UBERON:0003061!1.51e-18!45;UBERON:0002405!1.64e-17!70;UBERON:0004177!3.09e-16!29;UBERON:0003408!3.50e-13!24;UBERON:0005057!6.31e-13!51;UBERON:0006562!7.81e-13!24;UBERON:0001557!7.81e-13!24;UBERON:0001042!7.81e-13!24;UBERON:0008814!7.81e-13!24;UBERON:0009145!7.81e-13!24;UBERON:0002370!3.79e-12!23;UBERON:0000974!3.79e-12!23;UBERON:0004807!3.79e-12!23;UBERON:0005058!3.79e-12!23;UBERON:0003351!3.79e-12!23;UBERON:0009113!3.79e-12!23;UBERON:0003295!3.79e-12!23;UBERON:0009722!3.79e-12!23;UBERON:0005562!3.79e-12!23;UBERON:0007690!3.79e-12!23;UBERON:0001041!7.04e-12!92;UBERON:0001004!7.50e-12!42;UBERON:0000077!2.22e-11!97;UBERON:0000065!5.47e-11!41;UBERON:0000072!8.51e-11!27;UBERON:0003081!2.92e-09!88;UBERON:0003104!3.92e-09!131;UBERON:0009142!3.92e-09!131;UBERON:0001007!1.51e-08!128;UBERON:0001555!1.51e-08!128;UBERON:0007026!1.51e-08!128;UBERON:0004921!2.77e-08!126;UBERON:0004185!2.77e-08!126;UBERON:0004119!3.17e-08!130;UBERON:0000925!3.17e-08!130;UBERON:0006595!3.17e-08!130;UBERON:0000926!3.62e-08!193;UBERON:0004120!3.62e-08!193;UBERON:0006603!3.62e-08!193;UBERON:0005911!1.00e-07!69;UBERON:0000063!3.77e-07!35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.97e-17,48;UBERON:0002405,5.97e-17,48;UBERON:0002390,2.70e-15,45;UBERON:0003061,2.70e-15,45;UBERON:0002384,6.31e-15,46;UBERON:0004177,9.84e-11,29;UBERON:0005057,9.84e-11,29;UBERON:0003408,3.91e-10,24;UBERON:0000077,9.84e-09,35;UBERON:0002370,5.44e-08,23;UBERON:0000974,5.44e-08,23;UBERON:0004807,5.44e-08,23;UBERON:0005058,5.44e-08,23;UBERON:0003351,5.44e-08,23;UBERON:0009113,5.44e-08,23;UBERON:0003295,5.44e-08,23;UBERON:0009722,5.44e-08,23;UBERON:0005562,5.44e-08,23;UBERON:0007690,5.44e-08,23;UBERON:0006562,1.22e-07,24;UBERON:0001557,1.22e-07,24;UBERON:0001042,1.22e-07,24;UBERON:0008814,1.22e-07,24;UBERON:0009145,1.22e-07,24;UBERON:0003081,4.56e-07,87;UBERON:0000029,6.50e-07,1;UBERON:0001097,6.50e-07,1;UBERON:0003968,6.50e-07,1;UBERON:0001467,6.50e-07,1;UBERON:0000072,9.74e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0.774739940649458,5.77233760821834,3.04283884218592,7.19115466547121,2.39316476986009,2.22560948910567,0.611942816932982,0.333109761815663,0.607425802169478,2.09868563438444,2.5236973228659,4.38766187538364,5.51706547337439,0,0,0,0,0.22940928106717,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0.837063261473815,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,2.51673909086605,1.45072428402269,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,5.95557132388495,0.148442139064825,0,0,0,0,0,0,0,0.433798070759735,0.884610551949874,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0.608580364165509,0,0,0,0.324270453550071,0,0,0.744281895337007,0.312037673114561,0.252578877947112,0.179397413521912,0,0.739012760666419,0,0,0,0,0,0.476087281772027,0,0,0,0.159454768657487,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70870880797853,0,0.185194527369712,0.941842285023455,1.6403307326523,0.915112692826091,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,1.24267862617385,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0,0.129920822977795,0,0.39736270956253,0.360586348559907,0.443068581523732,0.403865799792591,0.381034033274999,0.201652370273681,0.682205165178267,0.288635524920988,0.350630706544707,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0.0640251524048693,0.0574354689556133,0,0,0,0,0.147198920134397,0,0,0,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr16:45224470..45224477,+ | |||
}} |
Revision as of 12:45, 13 September 2013
Short description: | p@chr16:45224470..45224477, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:45224470..45224477, + |
Coexpression cluster: | MCL_coexpression_mm9:1496 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.97e-17 | 48 |
immune system | 5.97e-17 | 48 |
hematopoietic system | 2.70e-15 | 45 |
blood island | 2.70e-15 | 45 |
connective tissue | 6.31e-15 | 46 |
hemopoietic organ | 9.84e-11 | 29 |
immune organ | 9.84e-11 | 29 |
gland of gut | 3.91e-10 | 24 |
mixed endoderm/mesoderm-derived structure | 9.84e-09 | 35 |
thymus | 5.44e-08 | 23 |
neck | 5.44e-08 | 23 |
respiratory system epithelium | 5.44e-08 | 23 |
hemolymphoid system gland | 5.44e-08 | 23 |
pharyngeal epithelium | 5.44e-08 | 23 |
thymic region | 5.44e-08 | 23 |
pharyngeal gland | 5.44e-08 | 23 |
entire pharyngeal arch endoderm | 5.44e-08 | 23 |
thymus primordium | 5.44e-08 | 23 |
early pharyngeal endoderm | 5.44e-08 | 23 |
pharynx | 1.22e-07 | 24 |
upper respiratory tract | 1.22e-07 | 24 |
chordate pharynx | 1.22e-07 | 24 |
pharyngeal arch system | 1.22e-07 | 24 |
pharyngeal region of foregut | 1.22e-07 | 24 |
lateral plate mesoderm | 4.56e-07 | 87 |
lymph node | 6.50e-07 | 1 |
axillary lymph node | 6.50e-07 | 1 |
peripheral lymph node | 6.50e-07 | 1 |
shoulder | 6.50e-07 | 1 |
segment of respiratory tract | 9.74e-07 | 27 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.