FFCP PHASE1:Mm9::chr6:125021344..125021363,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=381810|HGNC=|MCL_coexpression_id=1890|UniProt=G3X9K0|association_with_transcript=49bp_to_ENSMUST00000171989,NM_001163268,uc012ess.1_5end|description=CAGE_peak_2_at_Lpar5_5end|id=chr6:125021344..125021363,+|ontology_enrichment_celltype=CL:0000988!1.76e-16!32;CL:0002032!1.76e-16!32;CL:0000037!1.76e-16!32;CL:0000566!1.76e-16!32;CL:0000837!1.76e-16!32;CL:0002031!6.20e-15!25;CL:0000049!6.71e-11!19;CL:0000763!7.74e-10!16;CL:0000738!2.83e-09!17;CL:0002087!2.83e-09!17;CL:0002320!3.12e-09!46;CL:0000134!3.12e-09!46;CL:0000839!4.57e-09!13;CL:0000838!3.46e-07!12;CL:0000084!8.11e-07!11;CL:0000827!8.11e-07!11;CL:0000542!9.55e-07!13;CL:0000051!9.55e-07!13|ontology_enrichment_celltype_v019_2=CL:0000988,1.56e-20,32;CL:0002032,1.56e-20,32;CL:0000037,1.56e-20,32;CL:0000837,1.56e-20,32;CL:0002031,7.78e-19,25;CL:0002320,1.74e-14,46;CL:0000134,1.74e-14,46;CL:0000049,2.39e-14,19;CL:0000763,6.78e-13,16;CL:0000839,7.71e-12,13;CL:0000738,1.01e-10,17;CL:0002087,1.01e-10,17;CL:0000219,1.90e-10,54;CL:0000838,2.54e-08,12;CL:0000050,2.58e-08,9;CL:0000084,8.24e-08,11;CL:0000827,8.24e-08,11;CL:0000542,2.26e-07,13;CL:0000051,2.26e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!9.93e-20!48;UBERON:0002390!3.12e-18!45;UBERON:0003061!3.12e-18!45;UBERON:0002405!2.09e-14!70;UBERON:0002371!4.43e-10!16;UBERON:0001007!1.82e-09!128;UBERON:0001555!1.82e-09!128;UBERON:0007026!1.82e-09!128;UBERON:0004177!2.16e-09!29;UBERON:0002384!3.12e-09!46;UBERON:0001474!5.18e-09!22;UBERON:0004765!5.18e-09!22;UBERON:0001434!5.18e-09!22;UBERON:0004119!6.53e-09!130;UBERON:0000925!6.53e-09!130;UBERON:0006595!6.53e-09!130;UBERON:0004921!7.20e-09!126;UBERON:0004185!7.20e-09!126;UBERON:0006562!3.45e-07!24;UBERON:0001557!3.45e-07!24;UBERON:0001042!3.45e-07!24;UBERON:0008814!3.45e-07!24;UBERON:0009145!3.45e-07!24;UBERON:0003408!3.81e-07!24;UBERON:0002370!4.89e-07!23;UBERON:0000974!4.89e-07!23;UBERON:0004807!4.89e-07!23;UBERON:0005058!4.89e-07!23;UBERON:0003351!4.89e-07!23;UBERON:0009113!4.89e-07!23;UBERON:0003295!4.89e-07!23;UBERON:0009722!4.89e-07!23;UBERON:0005562!4.89e-07!23;UBERON:0007690!4.89e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.89e-27,48;UBERON:0002405,2.89e-27,48;UBERON:0002390,3.37e-25,45;UBERON:0003061,3.37e-25,45;UBERON:0002384,1.74e-14,46;UBERON:0002371,3.16e-13,16;UBERON:0001007,5.17e-13,116;UBERON:0001555,5.17e-13,116;UBERON:0007026,5.17e-13,116;UBERON:0004177,5.91e-13,29;UBERON:0005057,5.91e-13,29;UBERON:0004119,1.99e-12,118;UBERON:0000925,1.99e-12,118;UBERON:0006595,1.99e-12,118;UBERON:0004921,3.58e-12,114;UBERON:0001474,7.93e-12,22;UBERON:0004765,7.93e-12,22;UBERON:0001434,7.93e-12,22;UBERON:0003081,2.41e-10,87;UBERON:0006562,6.73e-10,24;UBERON:0001557,6.73e-10,24;UBERON:0001042,6.73e-10,24;UBERON:0008814,6.73e-10,24;UBERON:0009145,6.73e-10,24;UBERON:0003408,7.73e-10,24;UBERON:0002370,1.07e-09,23;UBERON:0000974,1.07e-09,23;UBERON:0004807,1.07e-09,23;UBERON:0005058,1.07e-09,23;UBERON:0003351,1.07e-09,23;UBERON:0009113,1.07e-09,23;UBERON:0003295,1.07e-09,23;UBERON:0009722,1.07e-09,23;UBERON:0005562,1.07e-09,23;UBERON:0007690,1.07e-09,23;UBERON:0000077,3.64e-09,35;UBERON:0000072,5.12e-08,27;UBERON:0005409,8.43e-08,47;UBERON:0002204,8.82e-08,32;UBERON:0001041,1.77e-07,80;UBERON:0001004,2.98e-07,42;UBERON:0000065,4.52e-07,41|phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,1.6787927191189,3.73780224952841,15.236552166106,1.83025338797167,0.936258105287974,3.25314139628459,6.86040567359893,34.5825474461036,27.8871083716602,5.99597571268193,5.66930748691513,2.09868563438444,17.6658812600613,17.824876368746,12.7316895539409,1.44573593256819,12.4113689001107,8.8807928307238,2.3998863419011,2.52350209173887,0.57423196411502,0.430761996159075,1.07735616342945,4.94060890586572,2.26827116783938,2.43903561720835,6.35030673459631,9.22597181376855,15.8481681015439,6.93243887403059,5.65197794218874,6.94175811292055,0.418531630736908,0,1.0470474879476,0,0,1.45653105909346,0.125896817975577,0,0,0,0,0,0,0,0,2.85230430298152,10.1550699881588,5.71359458542189,0,1.14613375975503,0,0,0.528990979272033,0,0,0,17.5480444869873,28.6771245144423,30.5506449426823,10.4860038681442,8.83702102239575,0,0,0,0.571301968807607,0.441737081903227,0.367472397644862,0.0958454710182364,0,0,0.383062014255563,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,0,0,0.142371680799103,0.186399445825301,0.151452386666368,0,0,0.860423876981386,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,0.79928715803342,18.9024655062435,0.890652834388949,0,0,0,0.150722640552623,0.352766121407114,0.376999773989026,0,3.47038456607788,7.96149496754887,0.485300549842228,1.98757366614354,3.87900202508178,3.72783522436244,0.292780797011547,0.628340120440365,2.29911349687732,2.27648736561249,2.99951365496704,3.17675567682662,0.149790639404823,0.915001205637253,0.125654352112864,0.347648640384553,0.255715457330331,0,0,1.2220723662038,1.61729061793121,0.758168275301024,0.210441855886474,0.1301204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| ||
|EntrezGene=381810 | |||
|HGNC= | |||
|MCL_coexpression_id=1890 | |||
|UniProt=G3X9K0 | |||
|association_with_transcript=49bp_to_ENSMUST00000171989,NM_001163268,uc012ess.1_5end | |||
|description=CAGE_peak_2_at_Lpar5_5end | |||
|id=chr6:125021344..125021363,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.76e-16!32;CL:0002032!1.76e-16!32;CL:0000037!1.76e-16!32;CL:0000566!1.76e-16!32;CL:0000837!1.76e-16!32;CL:0002031!6.20e-15!25;CL:0000049!6.71e-11!19;CL:0000763!7.74e-10!16;CL:0000738!2.83e-09!17;CL:0002087!2.83e-09!17;CL:0002320!3.12e-09!46;CL:0000134!3.12e-09!46;CL:0000839!4.57e-09!13;CL:0000838!3.46e-07!12;CL:0000084!8.11e-07!11;CL:0000827!8.11e-07!11;CL:0000542!9.55e-07!13;CL:0000051!9.55e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.56e-20,32;CL:0002032,1.56e-20,32;CL:0000037,1.56e-20,32;CL:0000837,1.56e-20,32;CL:0002031,7.78e-19,25;CL:0002320,1.74e-14,46;CL:0000134,1.74e-14,46;CL:0000049,2.39e-14,19;CL:0000763,6.78e-13,16;CL:0000839,7.71e-12,13;CL:0000738,1.01e-10,17;CL:0002087,1.01e-10,17;CL:0000219,1.90e-10,54;CL:0000838,2.54e-08,12;CL:0000050,2.58e-08,9;CL:0000084,8.24e-08,11;CL:0000827,8.24e-08,11;CL:0000542,2.26e-07,13;CL:0000051,2.26e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.93e-20!48;UBERON:0002390!3.12e-18!45;UBERON:0003061!3.12e-18!45;UBERON:0002405!2.09e-14!70;UBERON:0002371!4.43e-10!16;UBERON:0001007!1.82e-09!128;UBERON:0001555!1.82e-09!128;UBERON:0007026!1.82e-09!128;UBERON:0004177!2.16e-09!29;UBERON:0002384!3.12e-09!46;UBERON:0001474!5.18e-09!22;UBERON:0004765!5.18e-09!22;UBERON:0001434!5.18e-09!22;UBERON:0004119!6.53e-09!130;UBERON:0000925!6.53e-09!130;UBERON:0006595!6.53e-09!130;UBERON:0004921!7.20e-09!126;UBERON:0004185!7.20e-09!126;UBERON:0006562!3.45e-07!24;UBERON:0001557!3.45e-07!24;UBERON:0001042!3.45e-07!24;UBERON:0008814!3.45e-07!24;UBERON:0009145!3.45e-07!24;UBERON:0003408!3.81e-07!24;UBERON:0002370!4.89e-07!23;UBERON:0000974!4.89e-07!23;UBERON:0004807!4.89e-07!23;UBERON:0005058!4.89e-07!23;UBERON:0003351!4.89e-07!23;UBERON:0009113!4.89e-07!23;UBERON:0003295!4.89e-07!23;UBERON:0009722!4.89e-07!23;UBERON:0005562!4.89e-07!23;UBERON:0007690!4.89e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.89e-27,48;UBERON:0002405,2.89e-27,48;UBERON:0002390,3.37e-25,45;UBERON:0003061,3.37e-25,45;UBERON:0002384,1.74e-14,46;UBERON:0002371,3.16e-13,16;UBERON:0001007,5.17e-13,116;UBERON:0001555,5.17e-13,116;UBERON:0007026,5.17e-13,116;UBERON:0004177,5.91e-13,29;UBERON:0005057,5.91e-13,29;UBERON:0004119,1.99e-12,118;UBERON:0000925,1.99e-12,118;UBERON:0006595,1.99e-12,118;UBERON:0004921,3.58e-12,114;UBERON:0001474,7.93e-12,22;UBERON:0004765,7.93e-12,22;UBERON:0001434,7.93e-12,22;UBERON:0003081,2.41e-10,87;UBERON:0006562,6.73e-10,24;UBERON:0001557,6.73e-10,24;UBERON:0001042,6.73e-10,24;UBERON:0008814,6.73e-10,24;UBERON:0009145,6.73e-10,24;UBERON:0003408,7.73e-10,24;UBERON:0002370,1.07e-09,23;UBERON:0000974,1.07e-09,23;UBERON:0004807,1.07e-09,23;UBERON:0005058,1.07e-09,23;UBERON:0003351,1.07e-09,23;UBERON:0009113,1.07e-09,23;UBERON:0003295,1.07e-09,23;UBERON:0009722,1.07e-09,23;UBERON:0005562,1.07e-09,23;UBERON:0007690,1.07e-09,23;UBERON:0000077,3.64e-09,35;UBERON:0000072,5.12e-08,27;UBERON:0005409,8.43e-08,47;UBERON:0002204,8.82e-08,32;UBERON:0001041,1.77e-07,80;UBERON:0001004,2.98e-07,42;UBERON:0000065,4.52e-07,41 | |||
|phase1_expression=0.160148847104794,0.348975407639361,0,0,0.500895729946347,1.6787927191189,3.73780224952841,15.236552166106,1.83025338797167,0.936258105287974,3.25314139628459,6.86040567359893,34.5825474461036,27.8871083716602,5.99597571268193,5.66930748691513,2.09868563438444,17.6658812600613,17.824876368746,12.7316895539409,1.44573593256819,12.4113689001107,8.8807928307238,2.3998863419011,2.52350209173887,0.57423196411502,0.430761996159075,1.07735616342945,4.94060890586572,2.26827116783938,2.43903561720835,6.35030673459631,9.22597181376855,15.8481681015439,6.93243887403059,5.65197794218874,6.94175811292055,0.418531630736908,0,1.0470474879476,0,0,1.45653105909346,0.125896817975577,0,0,0,0,0,0,0,0,2.85230430298152,10.1550699881588,5.71359458542189,0,1.14613375975503,0,0,0.528990979272033,0,0,0,17.5480444869873,28.6771245144423,30.5506449426823,10.4860038681442,8.83702102239575,0,0,0,0.571301968807607,0.441737081903227,0.367472397644862,0.0958454710182364,0,0,0.383062014255563,0.46081959976873,0,0,0,0.279182999001381,0.56276261003168,0,0,0.142371680799103,0.186399445825301,0.151452386666368,0,0,0.860423876981386,0,0,0,0,2.10666630197628,0,0,0,0,0,0,0,0,0,0,0.79928715803342,18.9024655062435,0.890652834388949,0,0,0,0.150722640552623,0.352766121407114,0.376999773989026,0,3.47038456607788,7.96149496754887,0.485300549842228,1.98757366614354,3.87900202508178,3.72783522436244,0.292780797011547,0.628340120440365,2.29911349687732,2.27648736561249,2.99951365496704,3.17675567682662,0.149790639404823,0.915001205637253,0.125654352112864,0.347648640384553,0.255715457330331,0,0,1.2220723662038,1.61729061793121,0.758168275301024,0.210441855886474,0.130120442962704,0.229902104433473,0.180062129805349,0.452114453507145,0.136072998302656,0.2562274405697,0.0937017245597288,0.258703370739016,0,0,0.351902248327898,0,0,0.696504333044333,0.411564272815887,0.199034266818493,2.80885274925294,2.83082697826187,1.42081749697796,0,0,0,0.23674473558521,0.196764231747404,0,0,0.268273401399619,0,0.16455984991348,0.32833492815819,0.0810688095458557,0.292399974850665,0.658650345873152,0.402619256281115,0.210289948564127,0.411618449517138,0,2.64450566663544,0.426576501070468,0.464473343720877,1.15980715189884,1.61346819698674,1.77902435075896,1.71203063501303,0.949058123089023,1.31759163779209,1.50801125280162,1.39269530428806,0.974820435595601,3.59527763461689,2.37751854862164,2.38969527905241,0,0,1.1270773567308,0,0,0.0701358198903186,0.189709611372772,0.590440591918409,0.470996183524124,0,0.296452627087149,2.16898637430922,2.55526693647164,2.69834534861824,1.42002084971952,1.92941727801933,1.2731292589071,1.15078454980324,2.2698931748505,0.823684239564244,0,0.372140947668503,0.624075346229121,0,0,0.964887042726734,2.03228509183265,0.189491411770485,0.325929952884052,0.509235257325564,0,0,0.714130922658041,0.780534591431195,1.26108115284953,1.55025282754142,1.11618338060241,1.80249646187312,4.14443956478149,2.31438493730419,27.142431109069,34.2660580805787,0.983528546038072,2.48343071674259,0.321101179975584,0,0,1.51482556322624,0,0,0,0,0,0,0,0,0,0,0.709700426041343,0.534196811001766,0.325773918707152,1.97964147567043,1.32745138339963,0.242780636154981,0,0,0.295301892880773,0,0.516856586336442,1.45413491791002,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0,0.129358683782755,0,0.177340233642274,0.178368817602071,0.164549020602121,0.304464949114599,0,0.21183207086382,0.661585194164886,1.81374878235628,0.807322133479528,0.904693873922338,1.3130957840345,1.14898629821543,3.20628920292836,0.556275906031529,10.9357363710626,1.03193433981611,1.66675074632741,4.89757988212197,8.33834789098253,8.00723606222829,1.35982743995084,1.95932033253121,1.10559979043539,1.90934123603023,0.158167996790568,0.203319467126849,0.756037385752609,1.25452977608681,0.436725127492355,0.944050424693745,1.57041565878138,1.04702376793612,2.46268449254406,1.24267862617385,0,0.149516546043979,0,0,0,0.337912250981556,0.117357238645754,0.39061315453185,0.314578033277133,0.241584120826006,0.288030006257865,5.68820017130721,2.02725215290164,2.15693010046137,5.06691209613401,3.93858730468459,4.96703386953162,3.96644983415897,5.75989155980851,3.12995994839258,4.57240839929999,3.52891647978942,3.80085734885034,4.2333210321745,5.14258369598903,1.36038230169127,0,0,0,0.772758376128762,1.31377732815827,1.09890974560359,0.214368379079066,0.501572104035363,0.564751842617067,0,0.572895513439397,0.515559547031063,1.37016503954128,0.755393897389701,1.35004500046361,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.341467211508268,1.45864030240976,0.838452650511929,0.367687016900028,0.44449345560323,0.824140228955577,0,0.505394423527595,1.52087579934144,0.188626341386076,0.37456602987953,0.448176066834085,0.402048282689293,0,0.231768651889711,0.578727661391115,0.412085900803307,0.441596760403192,0.685738504770831,0.354951612318675,0,0.581385666529314,0.188218760830661,0.423073039458382,0.73171189149109,0.789209134313529,0.271608227691724,1.12228454331548,0.355905054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| |||
|short_description=p2@Lpar5 | |||
}} |
Revision as of 08:53, 14 September 2013
Short description: | p2@Lpar5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lpar5_5end |
Coexpression cluster: | MCL_coexpression_mm9:1890 |
Association with transcript: | 49bp_to_ENSMUST00000171989, NM_001163268, uc012ess.1_5end |
EntrezGene: | Lpar5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.56e-20 | 32 |
hematopoietic oligopotent progenitor cell | 1.56e-20 | 32 |
hematopoietic stem cell | 1.56e-20 | 32 |
hematopoietic multipotent progenitor cell | 1.56e-20 | 32 |
hematopoietic lineage restricted progenitor cell | 7.78e-19 | 25 |
connective tissue cell | 1.74e-14 | 46 |
mesenchymal cell | 1.74e-14 | 46 |
common myeloid progenitor | 2.39e-14 | 19 |
myeloid cell | 6.78e-13 | 16 |
myeloid lineage restricted progenitor cell | 7.71e-12 | 13 |
leukocyte | 1.01e-10 | 17 |
nongranular leukocyte | 1.01e-10 | 17 |
motile cell | 1.90e-10 | 54 |
lymphoid lineage restricted progenitor cell | 2.54e-08 | 12 |
megakaryocyte-erythroid progenitor cell | 2.58e-08 | 9 |
T cell | 8.24e-08 | 11 |
pro-T cell | 8.24e-08 | 11 |
lymphocyte | 2.26e-07 | 13 |
common lymphoid progenitor | 2.26e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.