FFCP PHASE1:Mm9::chr2:119056127..119056138,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=72112|HGNC=|MCL_coexpression_id=12|UniProt=Q7TT52|association_with_transcript=-485bp_to_ENSMUST00000076084_5end|description=CAGE_peak_5_at_Ppp1r14d_5end|id=chr2:119056127..119056138,-|ontology_enrichment_celltype=CL:0002563!2.45e-14!9;CL:0002251!2.45e-14!9;CL:0000239!1.15e-10!6;CL:0000677!1.15e-10!6;CL:0000212!1.15e-10!6;CL:0000584!1.15e-10!6;CL:0000075!5.38e-09!7;CL:0002076!8.69e-08!15;CL:0000066!1.32e-07!25|ontology_enrichment_celltype_v019_2=CL:0000239,9.34e-13,6;CL:0000677,9.34e-13,6;CL:0000584,9.34e-13,6;CL:0000075,6.90e-11,7;CL:0000682,5.77e-10,3;CL:0002563,2.16e-08,9;CL:0002251,2.16e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!2.04e-27!43;UBERON:0000344!3.57e-24!15;UBERON:0001242!4.15e-21!13;UBERON:0000060!4.15e-21!13;UBERON:0001262!4.15e-21!13;UBERON:0004786!4.15e-21!13;UBERON:0005409!1.10e-20!59;UBERON:0004923!2.51e-17!24;UBERON:0003350!2.45e-14!9;UBERON:0004808!2.45e-14!9;UBERON:0001277!2.45e-14!9;UBERON:0000485!2.37e-11!11;UBERON:0004119!4.08e-08!130;UBERON:0000925!4.08e-08!130;UBERON:0006595!4.08e-08!130;UBERON:0001007!9.79e-08!128;UBERON:0001555!9.79e-08!128;UBERON:0007026!9.79e-08!128|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.17e-42,31;UBERON:0005409,9.03e-29,47;UBERON:0000344,5.25e-23,15;UBERON:0001242,3.66e-18,13;UBERON:0001262,3.66e-18,13;UBERON:0004786,3.66e-18,13;UBERON:0004923,5.84e-16,24;UBERON:0002108,1.67e-12,4;UBERON:0001007,3.38e-12,116;UBERON:0001555,3.38e-12,116;UBERON:0007026,3.38e-12,116;UBERON:0004119,6.68e-12,118;UBERON:0000925,6.68e-12,118;UBERON:0006595,6.68e-12,118;UBERON:0000331,3.10e-10,3;UBERON:0002116,3.10e-10,3;UBERON:0001204,3.10e-10,3;UBERON:0001168,3.10e-10,3;UBERON:0004921,3.91e-10,114;UBERON:0003350,2.16e-08,9;UBERON:0004808,2.16e-08,9;UBERON:0001277,2.16e-08,9;UBERON:0001155,7.42e-07,2;UBERON:0000059,7.42e-07,2;UBERON:0000485,8.44e-07,11;UBERON:0001962,9.70e-07,2;UBERON:0001961,9.70e-07,2;UBERON:0001744,9.70e-07,2|phase1_expression=0,10.1202868215415,10.0099832665698,12.0985684522732,13.5241847085514,0.33575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63978026100879,4.12936705920906,14.3557991028755,5.1691439539089,4.95583835177545,23.5629040125904,13.1055667475164,4.6563407237614,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,3.72783522436244,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2254949704005,1.85115396664481,0,0,0.128867461322093,0,0.667134131534611,2.09248188723815,3.79623249235609,2.9645811850322,2.26201687920243,2.98434708061726,3.70431765526328,5.39291645192533,10.1584883441106,8.56307474993779,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,3.49960427887841,4.97071450469541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0,0,0,0,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0.561142271657738,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0,0,0|short_description=p5@Ppp1r14d}} | ||
|EntrezGene=72112 | |||
|HGNC= | |||
|MCL_coexpression_id=12 | |||
|UniProt=Q7TT52 | |||
|association_with_transcript=-485bp_to_ENSMUST00000076084_5end | |||
|description=CAGE_peak_5_at_Ppp1r14d_5end | |||
|id=chr2:119056127..119056138,- | |||
|ontology_enrichment_celltype=CL:0002563!2.45e-14!9;CL:0002251!2.45e-14!9;CL:0000239!1.15e-10!6;CL:0000677!1.15e-10!6;CL:0000212!1.15e-10!6;CL:0000584!1.15e-10!6;CL:0000075!5.38e-09!7;CL:0002076!8.69e-08!15;CL:0000066!1.32e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,9.34e-13,6;CL:0000677,9.34e-13,6;CL:0000584,9.34e-13,6;CL:0000075,6.90e-11,7;CL:0000682,5.77e-10,3;CL:0002563,2.16e-08,9;CL:0002251,2.16e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.04e-27!43;UBERON:0000344!3.57e-24!15;UBERON:0001242!4.15e-21!13;UBERON:0000060!4.15e-21!13;UBERON:0001262!4.15e-21!13;UBERON:0004786!4.15e-21!13;UBERON:0005409!1.10e-20!59;UBERON:0004923!2.51e-17!24;UBERON:0003350!2.45e-14!9;UBERON:0004808!2.45e-14!9;UBERON:0001277!2.45e-14!9;UBERON:0000485!2.37e-11!11;UBERON:0004119!4.08e-08!130;UBERON:0000925!4.08e-08!130;UBERON:0006595!4.08e-08!130;UBERON:0001007!9.79e-08!128;UBERON:0001555!9.79e-08!128;UBERON:0007026!9.79e-08!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.17e-42,31;UBERON:0005409,9.03e-29,47;UBERON:0000344,5.25e-23,15;UBERON:0001242,3.66e-18,13;UBERON:0001262,3.66e-18,13;UBERON:0004786,3.66e-18,13;UBERON:0004923,5.84e-16,24;UBERON:0002108,1.67e-12,4;UBERON:0001007,3.38e-12,116;UBERON:0001555,3.38e-12,116;UBERON:0007026,3.38e-12,116;UBERON:0004119,6.68e-12,118;UBERON:0000925,6.68e-12,118;UBERON:0006595,6.68e-12,118;UBERON:0000331,3.10e-10,3;UBERON:0002116,3.10e-10,3;UBERON:0001204,3.10e-10,3;UBERON:0001168,3.10e-10,3;UBERON:0004921,3.91e-10,114;UBERON:0003350,2.16e-08,9;UBERON:0004808,2.16e-08,9;UBERON:0001277,2.16e-08,9;UBERON:0001155,7.42e-07,2;UBERON:0000059,7.42e-07,2;UBERON:0000485,8.44e-07,11;UBERON:0001962,9.70e-07,2;UBERON:0001961,9.70e-07,2;UBERON:0001744,9.70e-07,2 | |||
|phase1_expression=0,10.1202868215415,10.0099832665698,12.0985684522732,13.5241847085514,0.33575854382378,1.63528848416868,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.63978026100879,4.12936705920906,14.3557991028755,5.1691439539089,4.95583835177545,23.5629040125904,13.1055667475164,4.6563407237614,0,0,0,0.577703239502549,0.664938581433969,0.612508068787107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0,1.23597483867187,0,0,0,0,0,3.72783522436244,0,0,5.8755122697976,0,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.2254949704005,1.85115396664481,0,0,0.128867461322093,0,0.667134131534611,2.09248188723815,3.79623249235609,2.9645811850322,2.26201687920243,2.98434708061726,3.70431765526328,5.39291645192533,10.1584883441106,8.56307474993779,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,2.04036585640896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,3.49960427887841,4.97071450469541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0.563047426353546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0.412070114477788,0,0,0,0,0,0.0640251524048693,0,0,0.231768651889711,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0.561142271657738,0.237270036248348,0,0,0,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p5@Ppp1r14d | |||
}} |
Revision as of 21:46, 13 September 2013
Short description: | p5@Ppp1r14d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Ppp1r14d_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -485bp_to_ENSMUST00000076084_5end |
EntrezGene: | Ppp1r14d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 9.34e-13 | 6 |
gut absorptive cell | 9.34e-13 | 6 |
enterocyte | 9.34e-13 | 6 |
columnar/cuboidal epithelial cell | 6.90e-11 | 7 |
M cell of gut | 5.77e-10 | 3 |
intestinal epithelial cell | 2.16e-08 | 9 |
epithelial cell of alimentary canal | 2.16e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.17e-42 | 31 |
gastrointestinal system | 9.03e-29 | 47 |
mucosa | 5.25e-23 | 15 |
intestinal mucosa | 3.66e-18 | 13 |
wall of intestine | 3.66e-18 | 13 |
gastrointestinal system mucosa | 3.66e-18 | 13 |
organ component layer | 5.84e-16 | 24 |
small intestine | 1.67e-12 | 4 |
digestive system | 3.38e-12 | 116 |
digestive tract | 3.38e-12 | 116 |
primitive gut | 3.38e-12 | 116 |
endoderm-derived structure | 6.68e-12 | 118 |
endoderm | 6.68e-12 | 118 |
presumptive endoderm | 6.68e-12 | 118 |
ileal mucosa | 3.10e-10 | 3 |
ileum | 3.10e-10 | 3 |
mucosa of small intestine | 3.10e-10 | 3 |
wall of small intestine | 3.10e-10 | 3 |
subdivision of digestive tract | 3.91e-10 | 114 |
epithelium of mucosa | 2.16e-08 | 9 |
gastrointestinal system epithelium | 2.16e-08 | 9 |
intestinal epithelium | 2.16e-08 | 9 |
colon | 7.42e-07 | 2 |
large intestine | 7.42e-07 | 2 |
simple columnar epithelium | 8.44e-07 | 11 |
gut-associated lymphoid tissue | 9.70e-07 | 2 |
mucosa-associated lymphoid tissue | 9.70e-07 | 2 |
lymphoid tissue | 9.70e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.