FFCP PHASE1:Mm9::chr7:134361912..134361979,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=54204|HGNC=|MCL_coexpression_id=36|UniProt=P42209|association_with_transcript=0bp_to_ENSMUST00000133733,ENSMUST00000138541,ENSMUST00000152267,NM_017461,uc009juq.1_5end|description=CAGE_peak_1_at_Sept1_5end|id=chr7:134361912..134361979,-|ontology_enrichment_celltype=CL:0000988!1.01e-09!32;CL:0002032!1.01e-09!32;CL:0000037!1.01e-09!32;CL:0000566!1.01e-09!32;CL:0000837!1.01e-09!32;CL:0000838!2.32e-08!12;CL:0002031!4.95e-08!25;CL:0000084!8.64e-08!11;CL:0000827!8.64e-08!11;CL:0000542!1.35e-07!13;CL:0000051!1.35e-07!13;CL:0000791!8.20e-07!9;CL:0000789!8.20e-07!9;CL:0002420!8.20e-07!9;CL:0002419!8.20e-07!9;CL:0000790!8.20e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,3.54e-11,32;CL:0002032,3.54e-11,32;CL:0000037,3.54e-11,32;CL:0000837,3.54e-11,32;CL:0002031,1.30e-09,25;CL:0000838,4.72e-09,12;CL:0000084,2.01e-08,11;CL:0000827,2.01e-08,11;CL:0000542,7.57e-08,13;CL:0000051,7.57e-08,13;CL:0000791,2.38e-07,9;CL:0000789,2.38e-07,9;CL:0002420,2.38e-07,9;CL:0002419,2.38e-07,9;CL:0000790,2.38e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!4.46e-12!29;UBERON:0002405!1.71e-11!70;UBERON:0002193!3.63e-11!48;UBERON:0005057!3.91e-11!51;UBERON:0001041!8.72e-11!92;UBERON:0001007!1.94e-10!128;UBERON:0001555!1.94e-10!128;UBERON:0007026!1.94e-10!128;UBERON:0000077!5.12e-10!97;UBERON:0004119!6.17e-10!130;UBERON:0000925!6.17e-10!130;UBERON:0006595!6.17e-10!130;UBERON:0002390!7.93e-10!45;UBERON:0003061!7.93e-10!45;UBERON:0004921!9.48e-10!126;UBERON:0004185!9.48e-10!126;UBERON:0003408!1.18e-09!24;UBERON:0002370!1.61e-09!23;UBERON:0000974!1.61e-09!23;UBERON:0004807!1.61e-09!23;UBERON:0005058!1.61e-09!23;UBERON:0003351!1.61e-09!23;UBERON:0009113!1.61e-09!23;UBERON:0003295!1.61e-09!23;UBERON:0009722!1.61e-09!23;UBERON:0005562!1.61e-09!23;UBERON:0007690!1.61e-09!23;UBERON:0006562!5.25e-09!24;UBERON:0001557!5.25e-09!24;UBERON:0001042!5.25e-09!24;UBERON:0008814!5.25e-09!24;UBERON:0009145!5.25e-09!24;UBERON:0000926!1.91e-08!193;UBERON:0004120!1.91e-08!193;UBERON:0006603!1.91e-08!193;UBERON:0001004!2.37e-08!42;UBERON:0000065!3.57e-08!41;UBERON:0003104!6.20e-08!131;UBERON:0009142!6.20e-08!131;UBERON:0003081!2.02e-07!88;UBERON:0002530!5.56e-07!65;UBERON:0001048!9.71e-07!147|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.92e-14,48;UBERON:0002405,2.92e-14,48;UBERON:0004177,5.94e-14,29;UBERON:0005057,5.94e-14,29;UBERON:0002390,1.06e-12,45;UBERON:0003061,1.06e-12,45;UBERON:0003408,2.95e-11,24;UBERON:0002370,4.07e-11,23;UBERON:0000974,4.07e-11,23;UBERON:0004807,4.07e-11,23;UBERON:0005058,4.07e-11,23;UBERON:0003351,4.07e-11,23;UBERON:0009113,4.07e-11,23;UBERON:0003295,4.07e-11,23;UBERON:0009722,4.07e-11,23;UBERON:0005562,4.07e-11,23;UBERON:0007690,4.07e-11,23;UBERON:0001041,5.44e-11,80;UBERON:0000077,6.23e-11,35;UBERON:0001007,2.11e-10,116;UBERON:0001555,2.11e-10,116;UBERON:0007026,2.11e-10,116;UBERON:0006562,3.48e-10,24;UBERON:0001557,3.48e-10,24;UBERON:0001042,3.48e-10,24;UBERON:0008814,3.48e-10,24;UBERON:0009145,3.48e-10,24;UBERON:0004119,9.71e-10,118;UBERON:0000925,9.71e-10,118;UBERON:0006595,9.71e-10,118;UBERON:0004921,1.13e-09,114;UBERON:0001004,2.77e-09,42;UBERON:0000065,4.36e-09,41;UBERON:0003081,4.10e-08,87;UBERON:0000072,7.15e-08,27;UBERON:0005911,1.28e-07,69|phase1_expression=0,0,0,0,0,0,0.233612640595526,217.701923322498,57.3010099157284,57.8139380015324,58.3853271648972,44.353320401407,255.431489057359,239.881584237729,24.3170126125434,42.1148556170838,28.682037003254,140.380663584416,140.405180012277,96.3364509581529,6.37824676133023,68.5107563286109,52.2399578277871,19.9990528491758,20.8762445771125,0,0.430761996159075,0.861884930743556,3.6104449696711,5.79669298447841,5.32153225572731,13.3356441426523,20.9122027778754,31.6963362030877,0,0,0.204169356262369,161.553209464446,95.3229120319037,167.527598071615,120.587455046358,112.702505018144,183.522913445776,0,0,0,0,0,0,0,0,0,138.756215209748,258.95428469805,216.444406647747,0.514518872071894,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0.420649922702764,0.571301968807607,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,3.3319525066601,0,1.15945795480671,3.44169550792555,0,0,0.649776417447669,0.448026887097336,10.6737759300131,0,0,0,0,0,0,0,0,0,0,9.47726201668198,197.310667339145,3.71105347662062,1.90833859442749,0.608930956624282,0.461230994512117,0.753613202763113,0.823120949949934,0.753999547978053,0,5.63937491987655,36.2690326299448,3.72063754879041,15.4589062922275,16.9706338597328,5.59175283654366,0,0,14.8165092020983,20.7280165395242,17.3971791988088,14.2318654321832,0,0,0.125654352112864,0.173824320192276,0,0,0,0.916554274652847,15.5508713262616,1.26361379216837,0.631325567659422,0.520481771850815,0.689706313300419,0.540186389416048,0.452114453507145,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0.945530400839096,0.703804496655795,1.09597866213787,1.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| ||
|EntrezGene=54204 | |||
|HGNC= | |||
|MCL_coexpression_id=36 | |||
|UniProt=P42209 | |||
|association_with_transcript=0bp_to_ENSMUST00000133733,ENSMUST00000138541,ENSMUST00000152267,NM_017461,uc009juq.1_5end | |||
|description=CAGE_peak_1_at_Sept1_5end | |||
|id=chr7:134361912..134361979,- | |||
|ontology_enrichment_celltype=CL:0000988!1.01e-09!32;CL:0002032!1.01e-09!32;CL:0000037!1.01e-09!32;CL:0000566!1.01e-09!32;CL:0000837!1.01e-09!32;CL:0000838!2.32e-08!12;CL:0002031!4.95e-08!25;CL:0000084!8.64e-08!11;CL:0000827!8.64e-08!11;CL:0000542!1.35e-07!13;CL:0000051!1.35e-07!13;CL:0000791!8.20e-07!9;CL:0000789!8.20e-07!9;CL:0002420!8.20e-07!9;CL:0002419!8.20e-07!9;CL:0000790!8.20e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.54e-11,32;CL:0002032,3.54e-11,32;CL:0000037,3.54e-11,32;CL:0000837,3.54e-11,32;CL:0002031,1.30e-09,25;CL:0000838,4.72e-09,12;CL:0000084,2.01e-08,11;CL:0000827,2.01e-08,11;CL:0000542,7.57e-08,13;CL:0000051,7.57e-08,13;CL:0000791,2.38e-07,9;CL:0000789,2.38e-07,9;CL:0002420,2.38e-07,9;CL:0002419,2.38e-07,9;CL:0000790,2.38e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.46e-12!29;UBERON:0002405!1.71e-11!70;UBERON:0002193!3.63e-11!48;UBERON:0005057!3.91e-11!51;UBERON:0001041!8.72e-11!92;UBERON:0001007!1.94e-10!128;UBERON:0001555!1.94e-10!128;UBERON:0007026!1.94e-10!128;UBERON:0000077!5.12e-10!97;UBERON:0004119!6.17e-10!130;UBERON:0000925!6.17e-10!130;UBERON:0006595!6.17e-10!130;UBERON:0002390!7.93e-10!45;UBERON:0003061!7.93e-10!45;UBERON:0004921!9.48e-10!126;UBERON:0004185!9.48e-10!126;UBERON:0003408!1.18e-09!24;UBERON:0002370!1.61e-09!23;UBERON:0000974!1.61e-09!23;UBERON:0004807!1.61e-09!23;UBERON:0005058!1.61e-09!23;UBERON:0003351!1.61e-09!23;UBERON:0009113!1.61e-09!23;UBERON:0003295!1.61e-09!23;UBERON:0009722!1.61e-09!23;UBERON:0005562!1.61e-09!23;UBERON:0007690!1.61e-09!23;UBERON:0006562!5.25e-09!24;UBERON:0001557!5.25e-09!24;UBERON:0001042!5.25e-09!24;UBERON:0008814!5.25e-09!24;UBERON:0009145!5.25e-09!24;UBERON:0000926!1.91e-08!193;UBERON:0004120!1.91e-08!193;UBERON:0006603!1.91e-08!193;UBERON:0001004!2.37e-08!42;UBERON:0000065!3.57e-08!41;UBERON:0003104!6.20e-08!131;UBERON:0009142!6.20e-08!131;UBERON:0003081!2.02e-07!88;UBERON:0002530!5.56e-07!65;UBERON:0001048!9.71e-07!147 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.92e-14,48;UBERON:0002405,2.92e-14,48;UBERON:0004177,5.94e-14,29;UBERON:0005057,5.94e-14,29;UBERON:0002390,1.06e-12,45;UBERON:0003061,1.06e-12,45;UBERON:0003408,2.95e-11,24;UBERON:0002370,4.07e-11,23;UBERON:0000974,4.07e-11,23;UBERON:0004807,4.07e-11,23;UBERON:0005058,4.07e-11,23;UBERON:0003351,4.07e-11,23;UBERON:0009113,4.07e-11,23;UBERON:0003295,4.07e-11,23;UBERON:0009722,4.07e-11,23;UBERON:0005562,4.07e-11,23;UBERON:0007690,4.07e-11,23;UBERON:0001041,5.44e-11,80;UBERON:0000077,6.23e-11,35;UBERON:0001007,2.11e-10,116;UBERON:0001555,2.11e-10,116;UBERON:0007026,2.11e-10,116;UBERON:0006562,3.48e-10,24;UBERON:0001557,3.48e-10,24;UBERON:0001042,3.48e-10,24;UBERON:0008814,3.48e-10,24;UBERON:0009145,3.48e-10,24;UBERON:0004119,9.71e-10,118;UBERON:0000925,9.71e-10,118;UBERON:0006595,9.71e-10,118;UBERON:0004921,1.13e-09,114;UBERON:0001004,2.77e-09,42;UBERON:0000065,4.36e-09,41;UBERON:0003081,4.10e-08,87;UBERON:0000072,7.15e-08,27;UBERON:0005911,1.28e-07,69 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,217.701923322498,57.3010099157284,57.8139380015324,58.3853271648972,44.353320401407,255.431489057359,239.881584237729,24.3170126125434,42.1148556170838,28.682037003254,140.380663584416,140.405180012277,96.3364509581529,6.37824676133023,68.5107563286109,52.2399578277871,19.9990528491758,20.8762445771125,0,0.430761996159075,0.861884930743556,3.6104449696711,5.79669298447841,5.32153225572731,13.3356441426523,20.9122027778754,31.6963362030877,0,0,0.204169356262369,161.553209464446,95.3229120319037,167.527598071615,120.587455046358,112.702505018144,183.522913445776,0,0,0,0,0,0,0,0,0,138.756215209748,258.95428469805,216.444406647747,0.514518872071894,0,0,0.606949382578793,0.528990979272033,0,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0.420649922702764,0.571301968807607,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0.294628585473668,0,0,3.3319525066601,0,1.15945795480671,3.44169550792555,0,0,0.649776417447669,0.448026887097336,10.6737759300131,0,0,0,0,0,0,0,0,0,0,9.47726201668198,197.310667339145,3.71105347662062,1.90833859442749,0.608930956624282,0.461230994512117,0.753613202763113,0.823120949949934,0.753999547978053,0,5.63937491987655,36.2690326299448,3.72063754879041,15.4589062922275,16.9706338597328,5.59175283654366,0,0,14.8165092020983,20.7280165395242,17.3971791988088,14.2318654321832,0,0,0.125654352112864,0.173824320192276,0,0,0,0.916554274652847,15.5508713262616,1.26361379216837,0.631325567659422,0.520481771850815,0.689706313300419,0.540186389416048,0.452114453507145,0.0680364991513279,0,0.0937017245597288,0,0.215567992932842,0.945530400839096,0.703804496655795,1.09597866213787,1.94633074457919,0.348252166522167,0.411564272815887,0.398068533636986,7.72434506044558,10.808612098818,11.9348669746149,2.07125772535502,1.87620847984877,1.62055855314913,1.89395788468168,3.14822770795846,2.31400669331067,1.39520366850245,0.804820204198858,2.6856028744449,0.822799249567402,3.94001913789829,2.10778904819225,3.80119967305864,3.95190207523891,3.08674763148855,0,0.102904612379284,15.1992640172547,3.96675849995316,0.639864751605702,0.232236671860439,0.902072229254653,2.01683524623343,0.889512175379481,2.28270751335071,4.2707615539006,1.31759163779209,3.77002813200404,3.58121649674071,6.04388670069272,3.59527763461689,1.94524244887225,3.98282546508734,0.758671603812327,0.342745537829186,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.632365371242573,0.442830443938806,0.784993639206874,0.616985819609003,2.07516838961004,3.33690211432188,2.55526693647164,1.79889689907883,3.04290182082754,4.82354319504834,4.83789118384698,6.04161888646702,9.40384315295205,6.58947391651396,15.814502718009,7.44281895337007,5.30464044294753,1.01031551178845,1.07638448113147,1.4473305640901,24.0179147216586,0.757965647081939,2.44447464663039,1.01847051465113,0.938760993154008,5.3602002381381,1.90434912708811,2.73187107000918,5.83250033192907,3.5434350343804,7.01600982092943,12.4536119183961,16.577758259126,8.24499633914616,0,0,6.88469982226651,6.07060841870411,0.160550589987792,0,0,2.52470927204373,0,0,0,0,0,0,0,0,0,0,2.98074178937364,2.13678724400706,1.46598263418218,3.29940245945071,6.63725691699814,0.728341908464944,2.41858845571801,0.754420319023592,3.54362271456927,0.614870295887855,1.29214146584111,1.09060118843252,2.49548164869305,6.32073515871632,1.05418608574999,3.09406629744561,0.340439605753788,0.720244376125241,0.517434735131018,0.857348140126369,1.24138163549592,0.535106452806212,0.493647061806363,0.913394847343798,0.938686832254841,0,2.20528398054962,0.8244312647074,1.13025098687134,0.72375509913787,0.477489376012546,0.984845398470368,6.12109756922687,0.18542530201051,51.6030060009515,9.28740905834501,12.9636169158798,33.3412168898303,47.5695912469168,43.4678529092393,87.3689130168416,84.9505315604604,86.3749836277649,1.90934123603023,1.58167996790568,1.62655573701479,0.86404272657441,0.836353184057875,0.218362563746178,1.48350781023303,2.0663363931334,1.04702376793612,2.98114438571124,3.72803587852155,0,0.448549638131936,0.330916980914195,0.972255941720238,1.03327858782185,1.520605129417,1.05621514781179,0.911430693907651,0.209718688851422,0,1.15212002503146,228.476040214173,37.7068900439705,68.5082084289398,98.869746286102,127.287980619579,173.647504078826,192.67330558051,193.620970125871,204.558027594947,216.27491728689,221.918433486186,199.788655516492,202.429714811253,241.701433711485,0.680191150845634,0,0,0,1.54551675225752,2.81523713176773,3.84618410961257,0.428736758158132,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0.31136204275253,0.399024873401031,0.512200817262403,1.45864030240976,0.838452650511929,1.2869045591501,0.888986911206461,0.412070114477788,1.92551525755089,2.27427490587418,1.52087579934144,0.943131706930381,1.591905626988,1.60062881012173,1.43588672389033,1.90517476513229,1.73826488917283,1.35036454324594,1.23625770240992,2.79677948255355,1.37147700954166,1.24233064311536,2.145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| |||
|short_description=p1@Sept1 | |||
}} |
Revision as of 11:54, 14 September 2013
Short description: | p1@Sept1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sept1_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000133733, ENSMUST00000138541, ENSMUST00000152267, NM_017461, uc009juq.1_5end |
EntrezGene: | Sept1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.54e-11 | 32 |
hematopoietic oligopotent progenitor cell | 3.54e-11 | 32 |
hematopoietic stem cell | 3.54e-11 | 32 |
hematopoietic multipotent progenitor cell | 3.54e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 1.30e-09 | 25 |
lymphoid lineage restricted progenitor cell | 4.72e-09 | 12 |
T cell | 2.01e-08 | 11 |
pro-T cell | 2.01e-08 | 11 |
lymphocyte | 7.57e-08 | 13 |
common lymphoid progenitor | 7.57e-08 | 13 |
mature alpha-beta T cell | 2.38e-07 | 9 |
alpha-beta T cell | 2.38e-07 | 9 |
immature T cell | 2.38e-07 | 9 |
mature T cell | 2.38e-07 | 9 |
immature alpha-beta T cell | 2.38e-07 | 9 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.