FFCP PHASE1:Mm9::chr6:120192714..120192748,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=330406|HGNC=|MCL_coexpression_id=869|UniProt=|association_with_transcript=-53bp_to_ENSMUST00000125341_5end|description=CAGE_peak_3_at_B4galnt3_5end|id=chr6:120192714..120192748,-|ontology_enrichment_celltype=CL:0002563!1.46e-07!9;CL:0002251!1.46e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.83e-11,9;CL:0002251,1.83e-11,9;CL:0000239,1.93e-08,6;CL:0000677,1.93e-08,6;CL:0000584,1.93e-08,6;CL:0000075,3.11e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!6.25e-14!15;UBERON:0001008!2.12e-13!17;UBERON:0006554!2.05e-12!16;UBERON:0000160!6.35e-12!43;UBERON:0001242!7.58e-12!13;UBERON:0000060!7.58e-12!13;UBERON:0001262!7.58e-12!13;UBERON:0004786!7.58e-12!13;UBERON:0002113!8.66e-11!14;UBERON:0003918!8.66e-11!14;UBERON:0005095!8.66e-11!14;UBERON:0007687!8.66e-11!14;UBERON:0005409!3.20e-10!59;UBERON:0000485!5.05e-09!11;UBERON:0003350!1.46e-07!9;UBERON:0004808!1.46e-07!9;UBERON:0001277!1.46e-07!9;UBERON:0000489!2.17e-07!21;UBERON:0004923!2.49e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.49e-19,31;UBERON:0001242,1.35e-13,13;UBERON:0001262,1.35e-13,13;UBERON:0004786,1.35e-13,13;UBERON:0002113,2.16e-12,14;UBERON:0003918,2.16e-12,14;UBERON:0011143,2.16e-12,14;UBERON:0005095,2.16e-12,14;UBERON:0007687,2.16e-12,14;UBERON:0000344,1.30e-11,15;UBERON:0003350,1.83e-11,9;UBERON:0004808,1.83e-11,9;UBERON:0001277,1.83e-11,9;UBERON:0005409,2.86e-11,47;UBERON:0006554,2.35e-09,18;UBERON:0000485,2.91e-09,11;UBERON:0001008,8.50e-09,19;UBERON:0000489,7.71e-08,21;UBERON:0004923,8.80e-07,24|phase1_expression=0.160148847104794,3.83872948403297,2.72999543633722,4.23449895829562,3.50627010962443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0.95995453676044,0.91763712426868,3.44539178469012,0.86152399231815,1.29282739611533,0.570070258369122,1.26015064879965,0.443461021310609,0,0,0,0.577703239502549,2.1610503896604,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,2.24711072210803,0,0,0,0.281686839553361,0,0,0,0,0,0,3.19714863213368,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.10308385572,2.11560453330835,0,0,0,0,0,0.190225626112559,3.32170343081158,0,0.251335208800269,0,0.38992817423824,2.69645822596266,3.6743468478698,3.58454291857861,0,0.456994050438915,1.1270773567308,1.22190796707189,1.16371492300575,1.75339549725796,7.90456714053216,17.8608279055319,16.9558626068685,16.0416313098341,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21225730555071,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.65954501176592,0,0.120625849856312,0,1.14898629821543,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.247960367176008,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.128050304809739,0.287177344778066,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.365855945745545,0,0,0,0,0,0,0,0.385813221962283,0,0,0,0.191288332068843,0,0|short_description=p3@B4galnt3}} | ||
|EntrezGene=330406 | |||
|HGNC= | |||
|MCL_coexpression_id=869 | |||
|UniProt= | |||
|association_with_transcript=-53bp_to_ENSMUST00000125341_5end | |||
|description=CAGE_peak_3_at_B4galnt3_5end | |||
|id=chr6:120192714..120192748,- | |||
|ontology_enrichment_celltype=CL:0002563!1.46e-07!9;CL:0002251!1.46e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.83e-11,9;CL:0002251,1.83e-11,9;CL:0000239,1.93e-08,6;CL:0000677,1.93e-08,6;CL:0000584,1.93e-08,6;CL:0000075,3.11e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!6.25e-14!15;UBERON:0001008!2.12e-13!17;UBERON:0006554!2.05e-12!16;UBERON:0000160!6.35e-12!43;UBERON:0001242!7.58e-12!13;UBERON:0000060!7.58e-12!13;UBERON:0001262!7.58e-12!13;UBERON:0004786!7.58e-12!13;UBERON:0002113!8.66e-11!14;UBERON:0003918!8.66e-11!14;UBERON:0005095!8.66e-11!14;UBERON:0007687!8.66e-11!14;UBERON:0005409!3.20e-10!59;UBERON:0000485!5.05e-09!11;UBERON:0003350!1.46e-07!9;UBERON:0004808!1.46e-07!9;UBERON:0001277!1.46e-07!9;UBERON:0000489!2.17e-07!21;UBERON:0004923!2.49e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,9.49e-19,31;UBERON:0001242,1.35e-13,13;UBERON:0001262,1.35e-13,13;UBERON:0004786,1.35e-13,13;UBERON:0002113,2.16e-12,14;UBERON:0003918,2.16e-12,14;UBERON:0011143,2.16e-12,14;UBERON:0005095,2.16e-12,14;UBERON:0007687,2.16e-12,14;UBERON:0000344,1.30e-11,15;UBERON:0003350,1.83e-11,9;UBERON:0004808,1.83e-11,9;UBERON:0001277,1.83e-11,9;UBERON:0005409,2.86e-11,47;UBERON:0006554,2.35e-09,18;UBERON:0000485,2.91e-09,11;UBERON:0001008,8.50e-09,19;UBERON:0000489,7.71e-08,21;UBERON:0004923,8.80e-07,24 | |||
|phase1_expression=0.160148847104794,3.83872948403297,2.72999543633722,4.23449895829562,3.50627010962443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97651515528744,0,0,0.95995453676044,0.91763712426868,3.44539178469012,0.86152399231815,1.29282739611533,0.570070258369122,1.26015064879965,0.443461021310609,0,0,0,0.577703239502549,2.1610503896604,1.83752420636132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448026887097336,2.24711072210803,0,0,0,0.281686839553361,0,0,0,0,0,0,3.19714863213368,0,0,0,0,0,0,0,0.251333182659351,0,0,0,0,0,0,0,0,0,5.62005521458901,0,0,0,0,0,0,0,0,0,0,0,0.870848794270651,0.758168275301024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.10308385572,2.11560453330835,0,0,0,0,0,0.190225626112559,3.32170343081158,0,0.251335208800269,0,0.38992817423824,2.69645822596266,3.6743468478698,3.58454291857861,0,0.456994050438915,1.1270773567308,1.22190796707189,1.16371492300575,1.75339549725796,7.90456714053216,17.8608279055319,16.9558626068685,16.0416313098341,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21225730555071,1.05418608574999,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0.65954501176592,0,0.120625849856312,0,1.14898629821543,3.49777003955821,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0.134864346384821,0.247960367176008,0.523511883968059,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0,0.206035057238894,0,0,0,0,0.0936415074698824,0.128050304809739,0.287177344778066,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0.365855945745545,0,0,0,0,0,0,0,0.385813221962283,0,0,0,0.191288332068843,0,0 | |||
|short_description=p3@B4galnt3 | |||
}} |
Revision as of 08:43, 14 September 2013
Short description: | p3@B4galnt3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_B4galnt3_5end |
Coexpression cluster: | MCL_coexpression_mm9:869 |
Association with transcript: | -53bp_to_ENSMUST00000125341_5end |
EntrezGene: | B4galnt3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.83e-11 | 9 |
epithelial cell of alimentary canal | 1.83e-11 | 9 |
brush border epithelial cell | 1.93e-08 | 6 |
gut absorptive cell | 1.93e-08 | 6 |
enterocyte | 1.93e-08 | 6 |
columnar/cuboidal epithelial cell | 3.11e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 9.49e-19 | 31 |
intestinal mucosa | 1.35e-13 | 13 |
wall of intestine | 1.35e-13 | 13 |
gastrointestinal system mucosa | 1.35e-13 | 13 |
kidney | 2.16e-12 | 14 |
kidney mesenchyme | 2.16e-12 | 14 |
upper urinary tract | 2.16e-12 | 14 |
kidney rudiment | 2.16e-12 | 14 |
kidney field | 2.16e-12 | 14 |
mucosa | 1.30e-11 | 15 |
epithelium of mucosa | 1.83e-11 | 9 |
gastrointestinal system epithelium | 1.83e-11 | 9 |
intestinal epithelium | 1.83e-11 | 9 |
gastrointestinal system | 2.86e-11 | 47 |
urinary system structure | 2.35e-09 | 18 |
simple columnar epithelium | 2.91e-09 | 11 |
renal system | 8.50e-09 | 19 |
cavitated compound organ | 7.71e-08 | 21 |
organ component layer | 8.80e-07 | 24 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.