FFCP PHASE1:Mm9::chr17:86020644..86020665,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=578|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:86020644..86020665,+|id=chr17:86020644..86020665,+|ontology_enrichment_celltype=CL:0002319!1.35e-11!43;CL:0000221!3.56e-11!44;CL:0000133!3.56e-11!44;CL:0000117!6.47e-11!23;CL:0000337!6.47e-11!23;CL:0000055!4.97e-09!50;CL:0000540!3.27e-08!33;CL:0000047!3.27e-08!33;CL:0000031!3.27e-08!33;CL:0000404!3.27e-08!33|ontology_enrichment_celltype_v019_2=CL:0002608,4.34e-09,3;CL:0002453,1.80e-08,8;CL:0002613,3.92e-08,3;CL:0002319,6.33e-08,43;CL:0000221,1.10e-07,44;CL:0000133,1.10e-07,44;CL:0000128,1.57e-07,6;CL:0000126,1.57e-07,6;CL:0000127,1.57e-07,6;CL:0002605,7.14e-07,2;CL:0002604,7.14e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!7.01e-30!49;UBERON:0000033!7.39e-27!63;UBERON:0002616!3.33e-20!49;UBERON:0004121!6.22e-20!102;UBERON:0000924!6.22e-20!102;UBERON:0006601!6.22e-20!102;UBERON:0000955!1.33e-19!50;UBERON:0006238!1.33e-19!50;UBERON:0003080!1.38e-19!40;UBERON:0001017!4.54e-19!73;UBERON:0005743!4.54e-19!73;UBERON:0002780!1.90e-18!39;UBERON:0001890!1.90e-18!39;UBERON:0006240!1.90e-18!39;UBERON:0002346!2.12e-18!71;UBERON:0003075!2.12e-18!71;UBERON:0007284!2.12e-18!71;UBERON:0000073!3.03e-18!75;UBERON:0001016!3.03e-18!75;UBERON:0007811!2.90e-17!86;UBERON:0000153!1.24e-15!94;UBERON:0001894!1.27e-14!10;UBERON:0006222!1.27e-14!10;UBERON:0001049!2.01e-14!52;UBERON:0005068!2.01e-14!52;UBERON:0006241!2.01e-14!52;UBERON:0007135!2.01e-14!52;UBERON:0000007!1.25e-12!8;UBERON:0003296!1.25e-12!8;UBERON:0010133!1.25e-12!8;UBERON:0000970!5.75e-12!9;UBERON:0000019!5.75e-12!9;UBERON:0000047!5.75e-12!9;UBERON:0004088!5.75e-12!9;UBERON:0002104!5.75e-12!9;UBERON:0001456!5.75e-12!9;UBERON:0003072!5.75e-12!9;UBERON:0003071!5.75e-12!9;UBERON:0004128!5.75e-12!9;UBERON:0002420!6.01e-10!8;UBERON:0007245!6.01e-10!8;UBERON:0010009!6.01e-10!8;UBERON:0010011!6.01e-10!8;UBERON:0000454!6.01e-10!8;UBERON:0001444!2.30e-09!11;UBERON:0000020!2.15e-08!12;UBERON:0001032!2.15e-08!12;UBERON:0004456!2.15e-08!12;UBERON:0002791!4.69e-08!29;UBERON:0003528!4.69e-08!29;UBERON:0001893!4.69e-08!29;UBERON:0005085!1.42e-07!13;UBERON:0000369!2.86e-07!5;UBERON:0002435!2.86e-07!5;UBERON:0000204!2.86e-07!5;UBERON:0010082!2.86e-07!5;UBERON:0001954!3.01e-07!7;UBERON:0003022!3.01e-07!7;UBERON:0002421!3.01e-07!7;UBERON:0000349!3.01e-07!7;UBERON:0002600!3.01e-07!7|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.06e-39,49;UBERON:0002346,1.88e-31,64;UBERON:0003075,1.88e-31,64;UBERON:0007284,1.88e-31,64;UBERON:0010371,7.22e-27,73;UBERON:0004121,2.97e-26,95;UBERON:0000924,2.97e-26,95;UBERON:0006601,2.97e-26,95;UBERON:0003080,2.15e-24,40;UBERON:0000007,1.62e-23,8;UBERON:0003296,1.62e-23,8;UBERON:0010133,1.62e-23,8;UBERON:0001894,5.33e-23,10;UBERON:0006222,5.33e-23,10;UBERON:0002616,6.54e-23,46;UBERON:0002780,1.84e-22,39;UBERON:0001890,1.84e-22,39;UBERON:0006240,1.84e-22,39;UBERON:0000955,2.53e-22,47;UBERON:0006238,2.53e-22,47;UBERON:0000073,9.62e-21,54;UBERON:0010314,4.00e-20,92;UBERON:0001049,1.00e-19,52;UBERON:0005068,1.00e-19,52;UBERON:0006241,1.00e-19,52;UBERON:0007135,1.00e-19,52;UBERON:0001017,5.72e-19,73;UBERON:0001016,2.54e-18,75;UBERON:0000970,7.42e-18,9;UBERON:0000019,7.42e-18,9;UBERON:0000047,7.42e-18,9;UBERON:0010312,7.42e-18,9;UBERON:0004088,7.42e-18,9;UBERON:0002104,7.42e-18,9;UBERON:0001456,7.42e-18,9;UBERON:0003072,7.42e-18,9;UBERON:0004128,7.42e-18,9;UBERON:0003071,7.42e-18,9;UBERON:0001444,2.20e-14,11;UBERON:0000020,4.40e-13,12;UBERON:0001032,4.40e-13,12;UBERON:0004456,4.40e-13,12;UBERON:0000369,6.85e-13,5;UBERON:0002435,6.85e-13,5;UBERON:0000204,6.85e-13,5;UBERON:0010082,6.85e-13,5;UBERON:0000033,5.57e-12,13;UBERON:0005085,5.57e-12,13;UBERON:0001954,3.81e-10,7;UBERON:0003022,3.81e-10,7;UBERON:0002421,3.81e-10,7;UBERON:0000349,3.81e-10,7;UBERON:0002600,3.81e-10,7;UBERON:0002420,5.81e-08,8;UBERON:0007245,5.81e-08,8;UBERON:0010009,5.81e-08,8;UBERON:0010011,5.81e-08,8;UBERON:0000454,5.81e-08,8;UBERON:0000483,7.64e-08,174;UBERON:0000119,1.10e-07,176;UBERON:0003528,1.25e-07,29;UBERON:0002791,1.25e-07,29;UBERON:0001893,1.25e-07,29|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,2.18025156380447,3.51497892375155,4.08302788055995,1.39986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,2.53532561402472,0.338844532069132,0,0,0,0,0.299600110518405,2.68952813725088,0,0.135005938331691,0,0,0,2.08234358665422,2.58782771749238,4.5960939330501,1.10115880999389,0.893811366596314,0.46081959976873,2.50583946687368,1.55528994124096,1.04182674111352,0.279182999001381,0.56276261003168,0.61119299110724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69623150928681,2.74500361691176,1.88481528169297,0.173824320192276,0,1.87009240103604,0.486723789203273,0,0,0,0.841767423545896,2.99277018814219,1.37941262660084,1.62055916824814,1.50704817835715,2.51735046859913,2.562274405697,1.3118241438362,4.9153640440413,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08527526904546,4.32146625675145,5.95049945400671,6.21577401591618,4.78818630834139,3.38900753443934,3.9491764944509,4.56697423671899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.551530525350042,0,0.206035057238894,0,0.252697211763798,0.760437899670719,0.188626341386076,0,0.512201219238954,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0,0.376437521661322,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0,0.409231043169689,0,0,0.999242311751784,0.233931608445408,0,0,0,0|short_description=p@chr17:86020644..86020665,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=578 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:86020644..86020665,+ | |||
|id=chr17:86020644..86020665,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.35e-11!43;CL:0000221!3.56e-11!44;CL:0000133!3.56e-11!44;CL:0000117!6.47e-11!23;CL:0000337!6.47e-11!23;CL:0000055!4.97e-09!50;CL:0000540!3.27e-08!33;CL:0000047!3.27e-08!33;CL:0000031!3.27e-08!33;CL:0000404!3.27e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0002608,4.34e-09,3;CL:0002453,1.80e-08,8;CL:0002613,3.92e-08,3;CL:0002319,6.33e-08,43;CL:0000221,1.10e-07,44;CL:0000133,1.10e-07,44;CL:0000128,1.57e-07,6;CL:0000126,1.57e-07,6;CL:0000127,1.57e-07,6;CL:0002605,7.14e-07,2;CL:0002604,7.14e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!7.01e-30!49;UBERON:0000033!7.39e-27!63;UBERON:0002616!3.33e-20!49;UBERON:0004121!6.22e-20!102;UBERON:0000924!6.22e-20!102;UBERON:0006601!6.22e-20!102;UBERON:0000955!1.33e-19!50;UBERON:0006238!1.33e-19!50;UBERON:0003080!1.38e-19!40;UBERON:0001017!4.54e-19!73;UBERON:0005743!4.54e-19!73;UBERON:0002780!1.90e-18!39;UBERON:0001890!1.90e-18!39;UBERON:0006240!1.90e-18!39;UBERON:0002346!2.12e-18!71;UBERON:0003075!2.12e-18!71;UBERON:0007284!2.12e-18!71;UBERON:0000073!3.03e-18!75;UBERON:0001016!3.03e-18!75;UBERON:0007811!2.90e-17!86;UBERON:0000153!1.24e-15!94;UBERON:0001894!1.27e-14!10;UBERON:0006222!1.27e-14!10;UBERON:0001049!2.01e-14!52;UBERON:0005068!2.01e-14!52;UBERON:0006241!2.01e-14!52;UBERON:0007135!2.01e-14!52;UBERON:0000007!1.25e-12!8;UBERON:0003296!1.25e-12!8;UBERON:0010133!1.25e-12!8;UBERON:0000970!5.75e-12!9;UBERON:0000019!5.75e-12!9;UBERON:0000047!5.75e-12!9;UBERON:0004088!5.75e-12!9;UBERON:0002104!5.75e-12!9;UBERON:0001456!5.75e-12!9;UBERON:0003072!5.75e-12!9;UBERON:0003071!5.75e-12!9;UBERON:0004128!5.75e-12!9;UBERON:0002420!6.01e-10!8;UBERON:0007245!6.01e-10!8;UBERON:0010009!6.01e-10!8;UBERON:0010011!6.01e-10!8;UBERON:0000454!6.01e-10!8;UBERON:0001444!2.30e-09!11;UBERON:0000020!2.15e-08!12;UBERON:0001032!2.15e-08!12;UBERON:0004456!2.15e-08!12;UBERON:0002791!4.69e-08!29;UBERON:0003528!4.69e-08!29;UBERON:0001893!4.69e-08!29;UBERON:0005085!1.42e-07!13;UBERON:0000369!2.86e-07!5;UBERON:0002435!2.86e-07!5;UBERON:0000204!2.86e-07!5;UBERON:0010082!2.86e-07!5;UBERON:0001954!3.01e-07!7;UBERON:0003022!3.01e-07!7;UBERON:0002421!3.01e-07!7;UBERON:0000349!3.01e-07!7;UBERON:0002600!3.01e-07!7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.06e-39,49;UBERON:0002346,1.88e-31,64;UBERON:0003075,1.88e-31,64;UBERON:0007284,1.88e-31,64;UBERON:0010371,7.22e-27,73;UBERON:0004121,2.97e-26,95;UBERON:0000924,2.97e-26,95;UBERON:0006601,2.97e-26,95;UBERON:0003080,2.15e-24,40;UBERON:0000007,1.62e-23,8;UBERON:0003296,1.62e-23,8;UBERON:0010133,1.62e-23,8;UBERON:0001894,5.33e-23,10;UBERON:0006222,5.33e-23,10;UBERON:0002616,6.54e-23,46;UBERON:0002780,1.84e-22,39;UBERON:0001890,1.84e-22,39;UBERON:0006240,1.84e-22,39;UBERON:0000955,2.53e-22,47;UBERON:0006238,2.53e-22,47;UBERON:0000073,9.62e-21,54;UBERON:0010314,4.00e-20,92;UBERON:0001049,1.00e-19,52;UBERON:0005068,1.00e-19,52;UBERON:0006241,1.00e-19,52;UBERON:0007135,1.00e-19,52;UBERON:0001017,5.72e-19,73;UBERON:0001016,2.54e-18,75;UBERON:0000970,7.42e-18,9;UBERON:0000019,7.42e-18,9;UBERON:0000047,7.42e-18,9;UBERON:0010312,7.42e-18,9;UBERON:0004088,7.42e-18,9;UBERON:0002104,7.42e-18,9;UBERON:0001456,7.42e-18,9;UBERON:0003072,7.42e-18,9;UBERON:0004128,7.42e-18,9;UBERON:0003071,7.42e-18,9;UBERON:0001444,2.20e-14,11;UBERON:0000020,4.40e-13,12;UBERON:0001032,4.40e-13,12;UBERON:0004456,4.40e-13,12;UBERON:0000369,6.85e-13,5;UBERON:0002435,6.85e-13,5;UBERON:0000204,6.85e-13,5;UBERON:0010082,6.85e-13,5;UBERON:0000033,5.57e-12,13;UBERON:0005085,5.57e-12,13;UBERON:0001954,3.81e-10,7;UBERON:0003022,3.81e-10,7;UBERON:0002421,3.81e-10,7;UBERON:0000349,3.81e-10,7;UBERON:0002600,3.81e-10,7;UBERON:0002420,5.81e-08,8;UBERON:0007245,5.81e-08,8;UBERON:0010009,5.81e-08,8;UBERON:0010011,5.81e-08,8;UBERON:0000454,5.81e-08,8;UBERON:0000483,7.64e-08,174;UBERON:0000119,1.10e-07,176;UBERON:0003528,1.25e-07,29;UBERON:0002791,1.25e-07,29;UBERON:0001893,1.25e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,2.18025156380447,3.51497892375155,4.08302788055995,1.39986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,2.53532561402472,0.338844532069132,0,0,0,0,0.299600110518405,2.68952813725088,0,0.135005938331691,0,0,0,2.08234358665422,2.58782771749238,4.5960939330501,1.10115880999389,0.893811366596314,0.46081959976873,2.50583946687368,1.55528994124096,1.04182674111352,0.279182999001381,0.56276261003168,0.61119299110724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.69623150928681,2.74500361691176,1.88481528169297,0.173824320192276,0,1.87009240103604,0.486723789203273,0,0,0,0.841767423545896,2.99277018814219,1.37941262660084,1.62055916824814,1.50704817835715,2.51735046859913,2.562274405697,1.3118241438362,4.9153640440413,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222798674082394,0.283076530788832,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.08527526904546,4.32146625675145,5.95049945400671,6.21577401591618,4.78818630834139,3.38900753443934,3.9491764944509,4.56697423671899,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0.551530525350042,0,0.206035057238894,0,0.252697211763798,0.760437899670719,0.188626341386076,0,0.512201219238954,0.287177344778066,0,0.115884325944855,0.192909220463705,0,0.294397840268795,0,0,0,0,0.376437521661322,0.0846146078916765,0,0.263069711437843,0,0,0.118635018124174,0,0.409231043169689,0,0,0.999242311751784,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr17:86020644..86020665,+ | |||
}} |
Revision as of 15:31, 13 September 2013
Short description: | p@chr17:86020644..86020665, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:86020644..86020665, + |
Coexpression cluster: | MCL_coexpression_mm9:578 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hippocampal neuron | 4.34e-09 | 3 |
oligodendrocyte precursor cell | 1.80e-08 | 8 |
striatum neuron | 3.92e-08 | 3 |
neural cell | 6.33e-08 | 43 |
ectodermal cell | 1.10e-07 | 44 |
neurectodermal cell | 1.10e-07 | 44 |
oligodendrocyte | 1.57e-07 | 6 |
macroglial cell | 1.57e-07 | 6 |
astrocyte | 1.57e-07 | 6 |
astrocyte of the cerebral cortex | 7.14e-07 | 2 |
astrocyte of the hippocampus | 7.14e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.