FFCP PHASE1:Mm9::chr2:120070791..120070807,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=329502|HGNC=|MCL_coexpression_id=159|UniProt=|association_with_transcript=10bp_to_ENSMUST00000127009_5end|description=CAGE_peak_4_at_Pla2g4e_5end|id=chr2:120070791..120070807,-|ontology_enrichment_celltype=CL:0000117!8.22e-17!23;CL:0000337!8.22e-17!23;CL:0000540!1.02e-09!33;CL:0000047!1.02e-09!33;CL:0000031!1.02e-09!33;CL:0000404!1.02e-09!33;CL:0000393!2.69e-07!39;CL:0000211!2.69e-07!39;CL:0002319!9.32e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,8.95e-40,23;CL:0000337,8.95e-40,23;CL:0000540,7.63e-27,33;CL:0000047,7.63e-27,33;CL:0000031,7.63e-27,33;CL:0000404,7.63e-27,33;CL:0000393,2.91e-22,39;CL:0000211,2.91e-22,39;CL:0002319,6.47e-20,43;CL:0000221,2.14e-19,44;CL:0000133,2.14e-19,44;CL:0002610,5.17e-13,3;CL:0002614,9.65e-13,3;CL:0002612,2.13e-12,3;CL:0002613,2.97e-11,3;CL:0002321,4.47e-11,70;CL:0002611,4.17e-08,2;CL:0000723,8.02e-08,91;CL:0000048,8.02e-08,91;CL:0000034,3.76e-07,97|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.22e-14!52;UBERON:0005068!1.22e-14!52;UBERON:0006241!1.22e-14!52;UBERON:0007135!1.22e-14!52;UBERON:0000073!1.30e-13!75;UBERON:0001016!1.30e-13!75;UBERON:0001017!1.72e-13!73;UBERON:0005743!1.72e-13!73;UBERON:0000955!7.80e-13!50;UBERON:0006238!7.80e-13!50;UBERON:0002616!3.23e-12!49;UBERON:0002020!1.10e-11!34;UBERON:0002346!5.02e-11!71;UBERON:0003075!5.02e-11!71;UBERON:0007284!5.02e-11!71;UBERON:0003076!5.38e-10!12;UBERON:0003057!5.38e-10!12;UBERON:0004121!7.34e-10!102;UBERON:0000924!7.34e-10!102;UBERON:0006601!7.34e-10!102;UBERON:0000033!4.52e-09!63;UBERON:0002298!2.07e-08!6;UBERON:0002240!3.05e-08!6;UBERON:0005174!3.05e-08!6;UBERON:0001137!3.05e-08!6;UBERON:0003080!1.98e-07!40;UBERON:0002791!2.03e-07!29;UBERON:0003528!2.03e-07!29;UBERON:0001893!2.03e-07!29;UBERON:0002420!2.58e-07!8;UBERON:0007245!2.58e-07!8;UBERON:0010009!2.58e-07!8;UBERON:0010011!2.58e-07!8;UBERON:0000454!2.58e-07!8;UBERON:0001948!3.52e-07!5;UBERON:0002315!3.52e-07!5;UBERON:0002780!9.11e-07!39;UBERON:0001890!9.11e-07!39;UBERON:0006240!9.11e-07!39|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.70e-29,12;UBERON:0003057,1.70e-29,12;UBERON:0000073,2.17e-27,54;UBERON:0001017,4.30e-26,73;UBERON:0001016,2.67e-25,75;UBERON:0001049,1.77e-22,52;UBERON:0005068,1.77e-22,52;UBERON:0006241,1.77e-22,52;UBERON:0007135,1.77e-22,52;UBERON:0002240,4.20e-22,6;UBERON:0005174,4.20e-22,6;UBERON:0001137,4.20e-22,6;UBERON:0004121,3.39e-19,95;UBERON:0000924,3.39e-19,95;UBERON:0006601,3.39e-19,95;UBERON:0001948,7.59e-19,5;UBERON:0002315,7.59e-19,5;UBERON:0002346,1.25e-17,64;UBERON:0003075,1.25e-17,64;UBERON:0007284,1.25e-17,64;UBERON:0002420,1.26e-16,8;UBERON:0007245,1.26e-16,8;UBERON:0010009,1.26e-16,8;UBERON:0010011,1.26e-16,8;UBERON:0000454,1.26e-16,8;UBERON:0002950,7.31e-16,4;UBERON:0001891,7.31e-16,4;UBERON:0009616,7.31e-16,4;UBERON:0010286,7.31e-16,4;UBERON:0010371,4.89e-15,73;UBERON:0002020,7.70e-14,34;UBERON:0004684,5.17e-13,3;UBERON:0002275,5.17e-13,3;UBERON:0002038,9.65e-13,3;UBERON:0009663,9.65e-13,3;UBERON:0009661,9.65e-13,3;UBERON:0000125,9.65e-13,3;UBERON:0002308,9.65e-13,3;UBERON:0002257,2.13e-12,3;UBERON:0002616,3.04e-11,46;UBERON:0010314,3.21e-11,92;UBERON:0000955,5.92e-11,47;UBERON:0006238,5.92e-11,47;UBERON:0004733,4.18e-10,6;UBERON:0004732,4.18e-10,6;UBERON:0002028,4.18e-10,6;UBERON:0007277,4.18e-10,6;UBERON:0001896,2.12e-08,2;UBERON:0002298,2.12e-08,2;UBERON:0005290,2.12e-08,2;UBERON:0010096,2.12e-08,2;UBERON:0000025,2.22e-08,114;UBERON:0002256,4.17e-08,2;UBERON:0004111,1.34e-07,122;UBERON:0011216,2.10e-07,194;UBERON:0000369,6.09e-07,5;UBERON:0002435,6.09e-07,5;UBERON:0000204,6.09e-07,5;UBERON:0010082,6.09e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,2.64495489636016,0,0,0,0,0,0,0,0,0,0.270011876663381,0,2.57085885963423,1.10434270475807,0.122490799214954,0.766763768145891,0,3.30347642998166,3.70293280447044,7.0659005297872,1.05509030184155,2.10421580285542,2.08365348222704,2.79182999001381,3.37657566019008,3.66715794664344,3.24091444021034,2.84743361598206,2.60959224155421,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0.323533699894818,0.662524555381181,0,0,2.63502717310392,1.8850203613211,0,0,0,0,1.79748767285787,0,0.125654352112864,0.173824320192276,0,1.24672826735736,0.973447578406546,0,0,0,0,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.329119699826961,0.32833492815819,0.243206428637567,0.146199987425332,0.658650345873152,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.22702204525186,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,2.02506750069542,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.287177344778066,0.476293691283074,0.347652977834566,0,0,0,0.685738504770831,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.338458431566706,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.309873682371932,0,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0,0.463735671240843|short_description=p4@Pla2g4e}} | ||
|EntrezGene=329502 | |||
|HGNC= | |||
|MCL_coexpression_id=159 | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENSMUST00000127009_5end | |||
|description=CAGE_peak_4_at_Pla2g4e_5end | |||
|id=chr2:120070791..120070807,- | |||
|ontology_enrichment_celltype=CL:0000117!8.22e-17!23;CL:0000337!8.22e-17!23;CL:0000540!1.02e-09!33;CL:0000047!1.02e-09!33;CL:0000031!1.02e-09!33;CL:0000404!1.02e-09!33;CL:0000393!2.69e-07!39;CL:0000211!2.69e-07!39;CL:0002319!9.32e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.95e-40,23;CL:0000337,8.95e-40,23;CL:0000540,7.63e-27,33;CL:0000047,7.63e-27,33;CL:0000031,7.63e-27,33;CL:0000404,7.63e-27,33;CL:0000393,2.91e-22,39;CL:0000211,2.91e-22,39;CL:0002319,6.47e-20,43;CL:0000221,2.14e-19,44;CL:0000133,2.14e-19,44;CL:0002610,5.17e-13,3;CL:0002614,9.65e-13,3;CL:0002612,2.13e-12,3;CL:0002613,2.97e-11,3;CL:0002321,4.47e-11,70;CL:0002611,4.17e-08,2;CL:0000723,8.02e-08,91;CL:0000048,8.02e-08,91;CL:0000034,3.76e-07,97 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.22e-14!52;UBERON:0005068!1.22e-14!52;UBERON:0006241!1.22e-14!52;UBERON:0007135!1.22e-14!52;UBERON:0000073!1.30e-13!75;UBERON:0001016!1.30e-13!75;UBERON:0001017!1.72e-13!73;UBERON:0005743!1.72e-13!73;UBERON:0000955!7.80e-13!50;UBERON:0006238!7.80e-13!50;UBERON:0002616!3.23e-12!49;UBERON:0002020!1.10e-11!34;UBERON:0002346!5.02e-11!71;UBERON:0003075!5.02e-11!71;UBERON:0007284!5.02e-11!71;UBERON:0003076!5.38e-10!12;UBERON:0003057!5.38e-10!12;UBERON:0004121!7.34e-10!102;UBERON:0000924!7.34e-10!102;UBERON:0006601!7.34e-10!102;UBERON:0000033!4.52e-09!63;UBERON:0002298!2.07e-08!6;UBERON:0002240!3.05e-08!6;UBERON:0005174!3.05e-08!6;UBERON:0001137!3.05e-08!6;UBERON:0003080!1.98e-07!40;UBERON:0002791!2.03e-07!29;UBERON:0003528!2.03e-07!29;UBERON:0001893!2.03e-07!29;UBERON:0002420!2.58e-07!8;UBERON:0007245!2.58e-07!8;UBERON:0010009!2.58e-07!8;UBERON:0010011!2.58e-07!8;UBERON:0000454!2.58e-07!8;UBERON:0001948!3.52e-07!5;UBERON:0002315!3.52e-07!5;UBERON:0002780!9.11e-07!39;UBERON:0001890!9.11e-07!39;UBERON:0006240!9.11e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003076,1.70e-29,12;UBERON:0003057,1.70e-29,12;UBERON:0000073,2.17e-27,54;UBERON:0001017,4.30e-26,73;UBERON:0001016,2.67e-25,75;UBERON:0001049,1.77e-22,52;UBERON:0005068,1.77e-22,52;UBERON:0006241,1.77e-22,52;UBERON:0007135,1.77e-22,52;UBERON:0002240,4.20e-22,6;UBERON:0005174,4.20e-22,6;UBERON:0001137,4.20e-22,6;UBERON:0004121,3.39e-19,95;UBERON:0000924,3.39e-19,95;UBERON:0006601,3.39e-19,95;UBERON:0001948,7.59e-19,5;UBERON:0002315,7.59e-19,5;UBERON:0002346,1.25e-17,64;UBERON:0003075,1.25e-17,64;UBERON:0007284,1.25e-17,64;UBERON:0002420,1.26e-16,8;UBERON:0007245,1.26e-16,8;UBERON:0010009,1.26e-16,8;UBERON:0010011,1.26e-16,8;UBERON:0000454,1.26e-16,8;UBERON:0002950,7.31e-16,4;UBERON:0001891,7.31e-16,4;UBERON:0009616,7.31e-16,4;UBERON:0010286,7.31e-16,4;UBERON:0010371,4.89e-15,73;UBERON:0002020,7.70e-14,34;UBERON:0004684,5.17e-13,3;UBERON:0002275,5.17e-13,3;UBERON:0002038,9.65e-13,3;UBERON:0009663,9.65e-13,3;UBERON:0009661,9.65e-13,3;UBERON:0000125,9.65e-13,3;UBERON:0002308,9.65e-13,3;UBERON:0002257,2.13e-12,3;UBERON:0002616,3.04e-11,46;UBERON:0010314,3.21e-11,92;UBERON:0000955,5.92e-11,47;UBERON:0006238,5.92e-11,47;UBERON:0004733,4.18e-10,6;UBERON:0004732,4.18e-10,6;UBERON:0002028,4.18e-10,6;UBERON:0007277,4.18e-10,6;UBERON:0001896,2.12e-08,2;UBERON:0002298,2.12e-08,2;UBERON:0005290,2.12e-08,2;UBERON:0010096,2.12e-08,2;UBERON:0000025,2.22e-08,114;UBERON:0002256,4.17e-08,2;UBERON:0004111,1.34e-07,122;UBERON:0011216,2.10e-07,194;UBERON:0000369,6.09e-07,5;UBERON:0002435,6.09e-07,5;UBERON:0000204,6.09e-07,5;UBERON:0010082,6.09e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,2.64495489636016,0,0,0,0,0,0,0,0,0,0.270011876663381,0,2.57085885963423,1.10434270475807,0.122490799214954,0.766763768145891,0,3.30347642998166,3.70293280447044,7.0659005297872,1.05509030184155,2.10421580285542,2.08365348222704,2.79182999001381,3.37657566019008,3.66715794664344,3.24091444021034,2.84743361598206,2.60959224155421,0,0.151143120213571,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0.150722640552623,0.23517741427141,0,0,0,0,0.323533699894818,0.662524555381181,0,0,2.63502717310392,1.8850203613211,0,0,0,0,1.79748767285787,0,0.125654352112864,0.173824320192276,0,1.24672826735736,0.973447578406546,0,0,0,0,0,0,0,0,0,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0.329119699826961,0.32833492815819,0.243206428637567,0.146199987425332,0.658650345873152,0,0,0,0,0,0,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.22702204525186,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0,0,0,0,0.0603129249281559,0,0,0,2.03967832211561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0,0,0,2.02506750069542,0.45032120322422,0.906284817968409,0.51776031175182,0,0,0,0.243106717068294,0,0,0,0.206035057238894,0.320919209591815,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.256100609619477,0.287177344778066,0.476293691283074,0.347652977834566,0,0,0,0.685738504770831,0.354951612318675,0,0.290692833264657,0.0941093804153306,0.338458431566706,0.182927972872773,0.263069711437843,0.407412341537585,0.561142271657738,0.593175090620871,0.492522411877817,0.409231043169689,0.309873682371932,0,0.749431733813838,0.233931608445408,0.429742108096597,0.191288332068843,0,0.463735671240843 | |||
|short_description=p4@Pla2g4e | |||
}} |
Revision as of 21:48, 13 September 2013
Short description: | p4@Pla2g4e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pla2g4e_5end |
Coexpression cluster: | MCL_coexpression_mm9:159 |
Association with transcript: | 10bp_to_ENSMUST00000127009_5end |
EntrezGene: | Pla2g4e |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.95e-40 | 23 |
neuroblast (sensu Vertebrata) | 8.95e-40 | 23 |
neuron | 7.63e-27 | 33 |
neuronal stem cell | 7.63e-27 | 33 |
neuroblast | 7.63e-27 | 33 |
electrically signaling cell | 7.63e-27 | 33 |
electrically responsive cell | 2.91e-22 | 39 |
electrically active cell | 2.91e-22 | 39 |
neural cell | 6.47e-20 | 43 |
ectodermal cell | 2.14e-19 | 44 |
neurectodermal cell | 2.14e-19 | 44 |
raphe nuclei neuron | 5.17e-13 | 3 |
neuron of the substantia nigra | 9.65e-13 | 3 |
neuron of the ventral spinal cord | 2.13e-12 | 3 |
striatum neuron | 2.97e-11 | 3 |
embryonic cell | 4.47e-11 | 70 |
neuron of the dorsal spinal cord | 4.17e-08 | 2 |
somatic stem cell | 8.02e-08 | 91 |
multi fate stem cell | 8.02e-08 | 91 |
stem cell | 3.76e-07 | 97 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.