FFCP PHASE1:Mm9::chr15:12134823..12134874,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=268783|HGNC=|MCL_coexpression_id=954|UniProt=Q80TA6,G3UZ04,G3XA69|association_with_transcript=0bp_to_ENSMUST00000071993,ENSMUST00000174160,ENSMUST00000174418,NM_172958,uc007vhl.1,uc007vhm.1,uc011zrk.1,uc011zrl.1_5end|description=CAGE_peak_1_at_Mtmr12_5end|id=chr15:12134823..12134874,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004119!1.66e-15!130;UBERON:0000925!1.66e-15!130;UBERON:0006595!1.66e-15!130;UBERON:0001007!2.05e-15!128;UBERON:0001555!2.05e-15!128;UBERON:0007026!2.05e-15!128;UBERON:0004921!6.42e-15!126;UBERON:0004185!6.42e-15!126;UBERON:0005911!5.92e-10!69;UBERON:0001041!2.98e-09!92;UBERON:0003104!3.87e-09!131;UBERON:0009142!3.87e-09!131;UBERON:0000077!9.93e-09!97;UBERON:0001004!1.38e-08!42;UBERON:0000490!1.76e-08!66;UBERON:0000065!2.71e-08!41;UBERON:0003408!3.69e-08!24;UBERON:0004177!4.43e-08!29;UBERON:0002370!7.26e-08!23;UBERON:0000974!7.26e-08!23;UBERON:0004807!7.26e-08!23;UBERON:0005058!7.26e-08!23;UBERON:0003351!7.26e-08!23;UBERON:0009113!7.26e-08!23;UBERON:0003295!7.26e-08!23;UBERON:0009722!7.26e-08!23;UBERON:0005562!7.26e-08!23;UBERON:0007690!7.26e-08!23;UBERON:0006562!1.08e-07!24;UBERON:0001557!1.08e-07!24;UBERON:0001042!1.08e-07!24;UBERON:0008814!1.08e-07!24;UBERON:0009145!1.08e-07!24;UBERON:0003929!1.64e-07!55;UBERON:0005409!2.90e-07!59;UBERON:0002193!8.40e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.20e-14,118;UBERON:0000925,3.20e-14,118;UBERON:0006595,3.20e-14,118;UBERON:0001007,3.80e-14,116;UBERON:0001555,3.80e-14,116;UBERON:0007026,3.80e-14,116;UBERON:0004921,1.12e-13,114;UBERON:0005911,5.92e-10,69;UBERON:0001004,1.38e-08,42;UBERON:0000490,1.76e-08,66;UBERON:0001041,2.49e-08,80;UBERON:0000065,2.71e-08,41;UBERON:0003408,3.69e-08,24;UBERON:0004177,4.43e-08,29;UBERON:0005057,4.43e-08,29;UBERON:0002370,7.26e-08,23;UBERON:0000974,7.26e-08,23;UBERON:0004807,7.26e-08,23;UBERON:0005058,7.26e-08,23;UBERON:0003351,7.26e-08,23;UBERON:0009113,7.26e-08,23;UBERON:0003295,7.26e-08,23;UBERON:0009722,7.26e-08,23;UBERON:0005562,7.26e-08,23;UBERON:0007690,7.26e-08,23;UBERON:0006562,1.08e-07,24;UBERON:0001557,1.08e-07,24;UBERON:0001042,1.08e-07,24;UBERON:0008814,1.08e-07,24;UBERON:0009145,1.08e-07,24;UBERON:0003929,1.64e-07,55;UBERON:0000077,2.12e-07,35;UBERON:0002193,8.40e-07,48;UBERON:0002405,8.40e-07,48|phase1_expression=10.4096750618116,27.9180326111489,34.5799421936047,44.1597748507972,56.6012174839372,19.1382369979554,20.7915250130018,50.0998494953316,29.143265485395,32.0668401061131,11.9852577757853,16.59260907103,34.0689452563099,38.7272382716158,22.6514638034651,19.8425762042029,16.0899231969474,23.6596624018678,27.1486578539363,19.0975343309114,12.8415368128115,12.9078236561151,9.66439219814061,15.359272588167,16.7468775179034,33.8796858827862,27.5687677541808,21.331652035903,24.893067948785,27.9753444033523,11.0865255327652,11.4305521222734,10.4561013889377,0,13.5760261283099,7.97926297720763,11.0251452381679,51.0608589499027,34.3787551590472,25.6526634547161,55.2937598749153,36.2014107027976,47.5800145970531,16.366586336825,13.8886395770735,11.7469921383476,4.69434806608824,4.36050312760893,6.81027166476863,6.02732687130279,10.2190087786515,5.75010257459886,22.8184344238521,43.5217285206807,50.4140698713696,9.00408026125814,11.747871037489,12.3761302146586,6.06949382578793,7.40587370980846,5.07065122804943,5.42151251310611,7.11435836888911,6.74924787961049,9.88866362566974,4.9733608046227,4.49400165777607,2.30530983192933,6.73982480005105,4.99521971827255,4.6271491497304,3.71346279724945,3.97563373712904,5.14461356702807,5.65488279007595,7.35375029288017,1.10115880999389,6.2566795661742,3.84016333140609,3.42904348098504,3.20206752608434,3.64639359389732,5.30447698102624,3.93933827022176,3.36156145108982,5.89257170947335,3.98640706237488,5.03278503728312,6.73963120665338,11.1845908958043,51.5958789888986,11.185510400758,8.15965600449301,6.47643829965381,8.4470934268197,9.85659151614138,10.1119982494861,11.930122580464,8.05336614268893,8.48014978824817,8.73229202615419,17.9657068380045,22.9324715735981,63.9960032837998,9.09262372247099,6.58735650235256,8.59391556525132,16.3282947998256,25.3759125974228,17.9614988268438,7.80683970447611,5.78484408793068,8.76338889573022,7.38540938707851,11.7588707135705,8.29399502775858,17.5508427091405,10.8449517689934,8.84610551949874,11.8089800461609,14.1338571814652,11.6370060752453,22.3670113461747,18.4451902117275,14.8707161837553,26.3120766864849,17.4930081778644,10.1983464268879,13.4694440697449,7.48953197024113,12.8100168789215,5.27748278874031,20.1636211423041,17.9000820131231,5.40248915854856,8.27430441645564,10.7949725681335,16.048499208702,10.108910337347,7.57590681191306,4.94457683258274,5.74755261083682,6.84236093260327,7.68594570962147,9.38903688288324,7.55870949680614,7.96464658757695,7.24369438069244,7.76044774558232,8.88798576788751,11.9646764431485,7.01426343768239,7.50727572909114,10.79581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| ||
|EntrezGene=268783 | |||
|HGNC= | |||
|MCL_coexpression_id=954 | |||
|UniProt=Q80TA6,G3UZ04,G3XA69 | |||
|association_with_transcript=0bp_to_ENSMUST00000071993,ENSMUST00000174160,ENSMUST00000174418,NM_172958,uc007vhl.1,uc007vhm.1,uc011zrk.1,uc011zrl.1_5end | |||
|description=CAGE_peak_1_at_Mtmr12_5end | |||
|id=chr15:12134823..12134874,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.66e-15!130;UBERON:0000925!1.66e-15!130;UBERON:0006595!1.66e-15!130;UBERON:0001007!2.05e-15!128;UBERON:0001555!2.05e-15!128;UBERON:0007026!2.05e-15!128;UBERON:0004921!6.42e-15!126;UBERON:0004185!6.42e-15!126;UBERON:0005911!5.92e-10!69;UBERON:0001041!2.98e-09!92;UBERON:0003104!3.87e-09!131;UBERON:0009142!3.87e-09!131;UBERON:0000077!9.93e-09!97;UBERON:0001004!1.38e-08!42;UBERON:0000490!1.76e-08!66;UBERON:0000065!2.71e-08!41;UBERON:0003408!3.69e-08!24;UBERON:0004177!4.43e-08!29;UBERON:0002370!7.26e-08!23;UBERON:0000974!7.26e-08!23;UBERON:0004807!7.26e-08!23;UBERON:0005058!7.26e-08!23;UBERON:0003351!7.26e-08!23;UBERON:0009113!7.26e-08!23;UBERON:0003295!7.26e-08!23;UBERON:0009722!7.26e-08!23;UBERON:0005562!7.26e-08!23;UBERON:0007690!7.26e-08!23;UBERON:0006562!1.08e-07!24;UBERON:0001557!1.08e-07!24;UBERON:0001042!1.08e-07!24;UBERON:0008814!1.08e-07!24;UBERON:0009145!1.08e-07!24;UBERON:0003929!1.64e-07!55;UBERON:0005409!2.90e-07!59;UBERON:0002193!8.40e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.20e-14,118;UBERON:0000925,3.20e-14,118;UBERON:0006595,3.20e-14,118;UBERON:0001007,3.80e-14,116;UBERON:0001555,3.80e-14,116;UBERON:0007026,3.80e-14,116;UBERON:0004921,1.12e-13,114;UBERON:0005911,5.92e-10,69;UBERON:0001004,1.38e-08,42;UBERON:0000490,1.76e-08,66;UBERON:0001041,2.49e-08,80;UBERON:0000065,2.71e-08,41;UBERON:0003408,3.69e-08,24;UBERON:0004177,4.43e-08,29;UBERON:0005057,4.43e-08,29;UBERON:0002370,7.26e-08,23;UBERON:0000974,7.26e-08,23;UBERON:0004807,7.26e-08,23;UBERON:0005058,7.26e-08,23;UBERON:0003351,7.26e-08,23;UBERON:0009113,7.26e-08,23;UBERON:0003295,7.26e-08,23;UBERON:0009722,7.26e-08,23;UBERON:0005562,7.26e-08,23;UBERON:0007690,7.26e-08,23;UBERON:0006562,1.08e-07,24;UBERON:0001557,1.08e-07,24;UBERON:0001042,1.08e-07,24;UBERON:0008814,1.08e-07,24;UBERON:0009145,1.08e-07,24;UBERON:0003929,1.64e-07,55;UBERON:0000077,2.12e-07,35;UBERON:0002193,8.40e-07,48;UBERON:0002405,8.40e-07,48 | |||
|phase1_expression=10.4096750618116,27.9180326111489,34.5799421936047,44.1597748507972,56.6012174839372,19.1382369979554,20.7915250130018,50.0998494953316,29.143265485395,32.0668401061131,11.9852577757853,16.59260907103,34.0689452563099,38.7272382716158,22.6514638034651,19.8425762042029,16.0899231969474,23.6596624018678,27.1486578539363,19.0975343309114,12.8415368128115,12.9078236561151,9.66439219814061,15.359272588167,16.7468775179034,33.8796858827862,27.5687677541808,21.331652035903,24.893067948785,27.9753444033523,11.0865255327652,11.4305521222734,10.4561013889377,0,13.5760261283099,7.97926297720763,11.0251452381679,51.0608589499027,34.3787551590472,25.6526634547161,55.2937598749153,36.2014107027976,47.5800145970531,16.366586336825,13.8886395770735,11.7469921383476,4.69434806608824,4.36050312760893,6.81027166476863,6.02732687130279,10.2190087786515,5.75010257459886,22.8184344238521,43.5217285206807,50.4140698713696,9.00408026125814,11.747871037489,12.3761302146586,6.06949382578793,7.40587370980846,5.07065122804943,5.42151251310611,7.11435836888911,6.74924787961049,9.88866362566974,4.9733608046227,4.49400165777607,2.30530983192933,6.73982480005105,4.99521971827255,4.6271491497304,3.71346279724945,3.97563373712904,5.14461356702807,5.65488279007595,7.35375029288017,1.10115880999389,6.2566795661742,3.84016333140609,3.42904348098504,3.20206752608434,3.64639359389732,5.30447698102624,3.93933827022176,3.36156145108982,5.89257170947335,3.98640706237488,5.03278503728312,6.73963120665338,11.1845908958043,51.5958789888986,11.185510400758,8.15965600449301,6.47643829965381,8.4470934268197,9.85659151614138,10.1119982494861,11.930122580464,8.05336614268893,8.48014978824817,8.73229202615419,17.9657068380045,22.9324715735981,63.9960032837998,9.09262372247099,6.58735650235256,8.59391556525132,16.3282947998256,25.3759125974228,17.9614988268438,7.80683970447611,5.78484408793068,8.76338889573022,7.38540938707851,11.7588707135705,8.29399502775858,17.5508427091405,10.8449517689934,8.84610551949874,11.8089800461609,14.1338571814652,11.6370060752453,22.3670113461747,18.4451902117275,14.8707161837553,26.3120766864849,17.4930081778644,10.1983464268879,13.4694440697449,7.48953197024113,12.8100168789215,5.27748278874031,20.1636211423041,17.9000820131231,5.40248915854856,8.27430441645564,10.7949725681335,16.048499208702,10.108910337347,7.57590681191306,4.94457683258274,5.74755261083682,6.84236093260327,7.68594570962147,9.38903688288324,7.55870949680614,7.96464658757695,7.24369438069244,7.76044774558232,8.88798576788751,11.9646764431485,7.01426343768239,7.50727572909114,10.7958171621872,10.0833246839892,7.76233640592123,5.61770549850588,8.23513302767089,9.09323198065896,8.07790512888457,7.03578179943289,8.64297895012871,6.62885259638589,8.06733350164356,8.79322543458056,9.06882384526591,7.77992864058896,9.92505410120941,9.2153515951549,10.342550236983,11.7549773841491,8.77199924551994,8.34290438105992,8.18659154438268,21.449574753541,4.32199371992995,36.6764849112016,29.3540128996534,7.46508876873319,9.0572302025571,12.5001437482431,13.1094291005173,7.56085349072559,8.94060442729028,24.2009821387701,11.3642278759568,14.8287773192159,11.1415624343044,16.3769833180061,26.0657628509724,24.4235996358404,26.4857893428308,7.01771233526402,9.59687505921722,9.01661885384643,10.1825663922657,11.0552917685547,15.0090654565282,21.0577668623777,20.8130308651239,21.351826986427,21.3477093584715,13.933273473096,9.84386123724955,12.579775687245,12.1425540687821,12.9830477688642,9.88826354984909,13.7497959961967,15.5355914223438,13.4572238223279,8.78596522201861,11.5014565221884,9.67566463938109,14.6657706363843,13.1341016532498,12.19902411949,12.0610880340842,26.4197061938245,6.63219941196697,9.12603868075345,8.48725428875941,13.8467246490216,15.5780819420889,21.1858840388552,33.1727201358258,20.3349335896986,21.4820748959312,23.1209414553356,20.3190510247515,21.2402527695052,29.2191098334653,16.5870412333199,26.6513785071168,17.2117495556663,19.0396354950265,5.45872005958493,6.44664276257117,6.72133276044369,8.33154059774431,7.2566890465739,8.98009111882268,5.81643173878557,10.5146271099123,7.12955757063661,11.889214293131,6.47697122679831,7.01414058987149,8.69633111482352,8.03303291054518,10.0777460497871,6.05423052468668,11.7278610734575,13.3625799607754,10.619611067197,12.3818124439041,12.3952658355548,13.3909606626688,12.1073776081117,15.0643222492524,21.4495483329624,16.3590178264877,13.5469003786194,17.0659849285341,7.37930260024991,12.3762651897824,12.5962654128902,7.38250485528372,4.39819524861365,8.14480733120051,6.56158864476412,7.13475270408282,7.73380396829969,6.39376393140658,9.38686832254841,17.7938939525609,7.49796553386871,21.1054403765094,22.282090884035,15.5004217065361,15.2796600324015,18.2196398717018,20.9866202373493,5.56275906031529,17.7705716029767,9.08102219038179,12.0376442790313,14.1276342753518,17.7702496037333,16.9295848172827,21.9272174692073,20.9927178485487,31.0949941059954,15.2747298882418,7.27572785236611,10.7759317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| |||
|short_description=p1@Mtmr12 | |||
}} |
Revision as of 10:13, 13 September 2013
Short description: | p1@Mtmr12 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mtmr12_5end |
Coexpression cluster: | MCL_coexpression_mm9:954 |
Association with transcript: | 0bp_to_ENSMUST00000071993, ENSMUST00000174160, ENSMUST00000174418, NM_172958, uc007vhl.1, uc007vhm.1, uc011zrk.1, uc011zrl.1_5end |
EntrezGene: | Mtmr12 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.20e-14 | 118 |
endoderm | 3.20e-14 | 118 |
presumptive endoderm | 3.20e-14 | 118 |
digestive system | 3.80e-14 | 116 |
digestive tract | 3.80e-14 | 116 |
primitive gut | 3.80e-14 | 116 |
subdivision of digestive tract | 1.12e-13 | 114 |
endo-epithelium | 5.92e-10 | 69 |
respiratory system | 1.38e-08 | 42 |
unilaminar epithelium | 1.76e-08 | 66 |
foregut | 2.49e-08 | 80 |
respiratory tract | 2.71e-08 | 41 |
gland of gut | 3.69e-08 | 24 |
hemopoietic organ | 4.43e-08 | 29 |
immune organ | 4.43e-08 | 29 |
thymus | 7.26e-08 | 23 |
neck | 7.26e-08 | 23 |
respiratory system epithelium | 7.26e-08 | 23 |
hemolymphoid system gland | 7.26e-08 | 23 |
pharyngeal epithelium | 7.26e-08 | 23 |
thymic region | 7.26e-08 | 23 |
pharyngeal gland | 7.26e-08 | 23 |
entire pharyngeal arch endoderm | 7.26e-08 | 23 |
thymus primordium | 7.26e-08 | 23 |
early pharyngeal endoderm | 7.26e-08 | 23 |
pharynx | 1.08e-07 | 24 |
upper respiratory tract | 1.08e-07 | 24 |
chordate pharynx | 1.08e-07 | 24 |
pharyngeal arch system | 1.08e-07 | 24 |
pharyngeal region of foregut | 1.08e-07 | 24 |
gut epithelium | 1.64e-07 | 55 |
mixed endoderm/mesoderm-derived structure | 2.12e-07 | 35 |
hemolymphoid system | 8.40e-07 | 48 |
immune system | 8.40e-07 | 48 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.