Personal tools

FFCP PHASE1:Mm9::chr6:54276949..54276972,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 1: Line 1:
{{FFCP
{{FFCP|EntrezGene=78004|HGNC=|MCL_coexpression_id=12|UniProt=Q9D1T5,A2RT92|association_with_transcript=-33bp_to_ENSMUST00000059138,NM_030024,uc009bzu.1_5end|description=CAGE_peak_3_at_Prr15_5end|id=chr6:54276949..54276972,+|ontology_enrichment_celltype=CL:0002563!6.12e-07!9;CL:0002251!6.12e-07!9|ontology_enrichment_celltype_v019_2=CL:0002563,2.69e-12,9;CL:0002251,2.69e-12,9;CL:0000075,1.08e-10,7;CL:0000239,6.50e-10,6;CL:0000677,6.50e-10,6;CL:0000584,6.50e-10,6;CL:0000066,2.69e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!3.47e-11!15;UBERON:0000160!6.31e-11!43;UBERON:0001242!7.92e-10!13;UBERON:0000060!7.92e-10!13;UBERON:0001262!7.92e-10!13;UBERON:0004786!7.92e-10!13;UBERON:0005409!1.30e-09!59;UBERON:0004923!3.75e-08!24;UBERON:0000485!1.27e-07!11;UBERON:0003103!4.99e-07!43;UBERON:0003350!6.12e-07!9;UBERON:0004808!6.12e-07!9;UBERON:0001277!6.12e-07!9;UBERON:0001008!8.36e-07!17;UBERON:0006554!9.53e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.28e-27,31;UBERON:0000344,9.44e-21,15;UBERON:0005409,4.09e-18,47;UBERON:0001242,4.87e-18,13;UBERON:0001262,4.87e-18,13;UBERON:0004786,4.87e-18,13;UBERON:0004923,8.39e-13,24;UBERON:0003350,2.69e-12,9;UBERON:0004808,2.69e-12,9;UBERON:0001277,2.69e-12,9;UBERON:0000485,1.10e-11,11;UBERON:0002113,2.97e-08,14;UBERON:0003918,2.97e-08,14;UBERON:0011143,2.97e-08,14;UBERON:0005095,2.97e-08,14;UBERON:0007687,2.97e-08,14;UBERON:0006554,2.45e-07,18;UBERON:0002108,3.48e-07,4;UBERON:0001008,8.20e-07,19|phase1_expression=0.960893082628764,80.264343757053,75.0748744992734,37.5055622020469,42.0752413154932,10.9121526742728,14.0167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,21.7589694999033,25.2350209173887,55.1262685550419,35.7532456812032,36.1991670912294,59.0972834509323,56.7067791959844,27.4945833212578,0,0,0,1.73310971850765,1.16364251750945,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0.558365998002762,0,0.30559649555362,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,1.54927761754349,0,0,0,0,0.506719730950197,0.505524445014783,3.76806803072898,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0,0.125666591329675,1.73036477414062,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,0,0,34.7421595083684,0.11981512450592,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0.509196819251581,1.49288364732112,6.82351447770922,0.420883711772948,0.260240885925407,0,0.180062129805349,0.30140963567143,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0.621377317606506,0.703578179943289,1.2604344302271,2.13070262026689,1.18058539048442,1.07986979021165,1.39520366850245,1.07309360559848,1.63471479314037,1.6455984991348,0.492502392237286,0.486412857275134,0.438599962275997,0.439100230582101,0.939444931322602,0,0,31.3897843834608,7.93351699990633,0,0.464473343720877,0.515469845288373,0.80673409849337,1.55664630691409,3.04361001780095,26.0990983849481,9.55253937399263,3.77002813200404,5.37182474511107,2.72949721966768,17.0775687644302,20.1008386383466,20.7106924184542,0.189667900953082,0.114248512609729,2.25415471346161,1.01825663922657,1.55161989734101,2.17421041659988,1.3279672796094,1.47610147979602,1.41298855057237,1.35736880313981,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0.936113019343682,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0.44292937929755,0.318909537314974,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,1.27746076687442,0.178065603667255,0,3.46437258242324,0,0,0.302323556964751,0,0.295301892880773,0,2.84271122485043,0,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.388076051348264,0.857348140126369,0.532020700926821,0.713475270408282,0,1.2178597964584,0.704015124191131,0.21183207086382,15.6575162619023,0,0,0.0603129249281559,0.238744688006273,0,20.1121777274597,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0.228778173206523,0,0.139951452323658,0,0,0,0.609958401380546,0.324016022465404,0.418176592028937,0.218362563746178,0.269728692769641,0.41326727862668,1.57053565190418,10.3691978633434,2.4853572523477,1.69107881605257,0.149516546043979,0,0.194451188344048,0.387479470433193,0.168956125490778,0.469428954583016,0.911430693907651,1.99232754408851,1.69108884578204,1.44015003128933,0,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0,0,0.233753804363138,0.226730383615211,0,0,0,0.965947970160952,9.19644129710792,1.83151624267265,0.428736758158132,2.50786052017682,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0.453142408984205,0,0,0.798049746802062,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0.962757628775446,0,1.2673964994512,0.565879024158229,0.187283014939765,0.384150914429216,0.287177344778066,0.952587382566147,0.231768651889711,0.964546102318525,0.412085900803307,0.441596760403192,1.37147700954166,0.354951612318675,0.476872379894642,0.436039249896986,0.564656282491984,0.676916863133412,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0.644613162144895,0.191288332068843,0.661774257358546,0.463735671240843|short_description=p3@Prr15}}
|EntrezGene=78004
|HGNC=
|MCL_coexpression_id=12
|UniProt=Q9D1T5,A2RT92
|association_with_transcript=-33bp_to_ENSMUST00000059138,NM_030024,uc009bzu.1_5end
|description=CAGE_peak_3_at_Prr15_5end
|id=chr6:54276949..54276972,+
|ontology_enrichment_celltype=CL:0002563!6.12e-07!9;CL:0002251!6.12e-07!9
|ontology_enrichment_celltype_v019_2=CL:0002563,2.69e-12,9;CL:0002251,2.69e-12,9;CL:0000075,1.08e-10,7;CL:0000239,6.50e-10,6;CL:0000677,6.50e-10,6;CL:0000584,6.50e-10,6;CL:0000066,2.69e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000344!3.47e-11!15;UBERON:0000160!6.31e-11!43;UBERON:0001242!7.92e-10!13;UBERON:0000060!7.92e-10!13;UBERON:0001262!7.92e-10!13;UBERON:0004786!7.92e-10!13;UBERON:0005409!1.30e-09!59;UBERON:0004923!3.75e-08!24;UBERON:0000485!1.27e-07!11;UBERON:0003103!4.99e-07!43;UBERON:0003350!6.12e-07!9;UBERON:0004808!6.12e-07!9;UBERON:0001277!6.12e-07!9;UBERON:0001008!8.36e-07!17;UBERON:0006554!9.53e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.28e-27,31;UBERON:0000344,9.44e-21,15;UBERON:0005409,4.09e-18,47;UBERON:0001242,4.87e-18,13;UBERON:0001262,4.87e-18,13;UBERON:0004786,4.87e-18,13;UBERON:0004923,8.39e-13,24;UBERON:0003350,2.69e-12,9;UBERON:0004808,2.69e-12,9;UBERON:0001277,2.69e-12,9;UBERON:0000485,1.10e-11,11;UBERON:0002113,2.97e-08,14;UBERON:0003918,2.97e-08,14;UBERON:0011143,2.97e-08,14;UBERON:0005095,2.97e-08,14;UBERON:0007687,2.97e-08,14;UBERON:0006554,2.45e-07,18;UBERON:0002108,3.48e-07,4;UBERON:0001008,8.20e-07,19
|phase1_expression=0.960893082628764,80.264343757053,75.0748744992734,37.5055622020469,42.0752413154932,10.9121526742728,14.0167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,21.7589694999033,25.2350209173887,55.1262685550419,35.7532456812032,36.1991670912294,59.0972834509323,56.7067791959844,27.4945833212578,0,0,0,1.73310971850765,1.16364251750945,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573066879877513,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10115880999389,0.127687338085188,0,0,0,0,0.558365998002762,0,0.30559649555362,0,0,0,0.075726193333184,0.0755715601067855,0.289864488701678,0,0,0,0,0,0.702222100658759,0,0,0,1.54927761754349,0,0,0,0,0.506719730950197,0.505524445014783,3.76806803072898,0,0.148442139064825,0.346970653532272,0,0,0.150722640552623,0,0.125666591329675,1.73036477414062,0.289198713839823,0,0.323533699894818,0.441683036920787,0,0,0,0,34.7421595083684,0.11981512450592,0,0.127070227073065,0,0,0.125654352112864,0.173824320192276,0,0,0,0.509196819251581,1.49288364732112,6.82351447770922,0.420883711772948,0.260240885925407,0,0.180062129805349,0.30140963567143,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0.284163499395593,0.621377317606506,0.703578179943289,1.2604344302271,2.13070262026689,1.18058539048442,1.07986979021165,1.39520366850245,1.07309360559848,1.63471479314037,1.6455984991348,0.492502392237286,0.486412857275134,0.438599962275997,0.439100230582101,0.939444931322602,0,0,31.3897843834608,7.93351699990633,0,0.464473343720877,0.515469845288373,0.80673409849337,1.55664630691409,3.04361001780095,26.0990983849481,9.55253937399263,3.77002813200404,5.37182474511107,2.72949721966768,17.0775687644302,20.1008386383466,20.7106924184542,0.189667900953082,0.114248512609729,2.25415471346161,1.01825663922657,1.55161989734101,2.17421041659988,1.3279672796094,1.47610147979602,1.41298855057237,1.35736880313981,0,0.166845105716094,0.196558995113203,0,0,0,0,0.287696137450811,0,0,0,0,0.936113019343682,0,0,0,0.184753190166605,0.189491411770485,0.162964976442026,0.169745085775188,0,0.167506257441816,0.238043640886014,0.390267295715598,0,0.44292937929755,0.318909537314974,0.655453258862952,0.518054945597687,0.144649058581512,0,0,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0.395287777946524,0,1.27746076687442,0.178065603667255,0,3.46437258242324,0,0,0.302323556964751,0,0.295301892880773,0,2.84271122485043,0,0.712994756769443,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.388076051348264,0.857348140126369,0.532020700926821,0.713475270408282,0,1.2178597964584,0.704015124191131,0.21183207086382,15.6575162619023,0,0,0.0603129249281559,0.238744688006273,0,20.1121777274597,0.18542530201051,0,0.412773735926445,0.185194527369712,0,0,0.228778173206523,0,0.139951452323658,0,0,0,0.609958401380546,0.324016022465404,0.418176592028937,0.218362563746178,0.269728692769641,0.41326727862668,1.57053565190418,10.3691978633434,2.4853572523477,1.69107881605257,0.149516546043979,0,0.194451188344048,0.387479470433193,0.168956125490778,0.469428954583016,0.911430693907651,1.99232754408851,1.69108884578204,1.44015003128933,0,0.202725215290164,0.102710957164827,0.129920822977795,0.358053391334963,0.198681354781265,0,0.147689527174577,0,0,0.100826185136841,0,0,0.233753804363138,0.226730383615211,0,0,0,0.965947970160952,9.19644129710792,1.83151624267265,0.428736758158132,2.50786052017682,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0.453142408984205,0,0,0.798049746802062,0,0,0.209613162627982,0.367687016900028,0.222246727801615,0.206035057238894,0.962757628775446,0,1.2673964994512,0.565879024158229,0.187283014939765,0.384150914429216,0.287177344778066,0.952587382566147,0.231768651889711,0.964546102318525,0.412085900803307,0.441596760403192,1.37147700954166,0.354951612318675,0.476872379894642,0.436039249896986,0.564656282491984,0.676916863133412,0.182927972872773,0.526139422875686,0.407412341537585,0.561142271657738,0.355905054372522,0.29551344712669,0,0.464810523557898,0.192906610981141,0,0.233931608445408,0.644613162144895,0.191288332068843,0.661774257358546,0.463735671240843
|short_description=p3@Prr15
}}

Revision as of 10:19, 14 September 2013

Short description:p3@Prr15
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Prr15_5end
Coexpression cluster:MCL_coexpression_mm9:12
Association with transcript: -33bp_to_ENSMUST00000059138, NM_030024, uc009bzu.1_5end
EntrezGene:Prr15
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Prr15

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I580.26
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I675.07
CD326+ enterocyte, pool1.CNhs13542.11848-124I337.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I442.08
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I710.91
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I814.02
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D121.76
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.24
GP2+ M cell, pool1.CNhs13228.11845-124H955.13
GP2+ M cell, pool2.CNhs13231.11846-124I135.75
GP2+ M cell, pool3.CNhs13240.11847-124I236.20
Ileum epithelium, pool1.CNhs13199.10252-104B959.10
Ileum epithelium, pool2.CNhs13232.10253-104C156.71
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C827.49
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.16
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.63
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.77
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A81.73
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H734.74
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B26.82
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.00
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I91.26
heart, embryo E14.CNhs10597.403-26D42.13
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.63
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G10.49
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I331.39
intestine, adult.CNhs10496.178-9A37.93
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D31.56
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D126.10
intestine, neonate N01.CNhs11192.1322-23E99.55
intestine, neonate N06.CNhs11102.688-20B83.77
intestine, neonate N07.CNhs11095.720-20F25.37
intestine, neonate N10.CNhs11098.755-23A52.73
intestine, neonate N20.CNhs11187.827-18D117.08
intestine, neonate N25.CNhs11121.1352-25E320.10
intestine, neonate N30.CNhs11131.1384-42G120.71
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I21.02
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D51.33
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H11.36
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G63.46
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G92.84
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F815.66
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I120.11
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I110.37
submandibular gland, adult.CNhs10469.59-29C12.49
testis, adult.CNhs10504.57-7G51.69
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.47
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D91.99
testis, neonate N20.CNhs11110.839-18H31.69
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F59.20
uterus, adult.CNhs10509.92-27E51.83
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr6:54276949..54276972,%2B&oldid=3035598"