FFCP PHASE1:Mm9::chr5:86522288..86522304,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=521|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:86522288..86522304,+|id=chr5:86522288..86522304,+|ontology_enrichment_celltype=CL:0000988!8.98e-08!32;CL:0002032!8.98e-08!32;CL:0000037!8.98e-08!32;CL:0000566!8.98e-08!32;CL:0000837!8.98e-08!32|ontology_enrichment_celltype_v019_2=CL:0002476,2.02e-09,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!1.56e-21!29;UBERON:0002193!3.65e-21!48;UBERON:0002390!3.50e-20!45;UBERON:0003061!3.50e-20!45;UBERON:0003408!7.24e-19!24;UBERON:0002370!1.04e-17!23;UBERON:0000974!1.04e-17!23;UBERON:0004807!1.04e-17!23;UBERON:0005058!1.04e-17!23;UBERON:0003351!1.04e-17!23;UBERON:0009113!1.04e-17!23;UBERON:0003295!1.04e-17!23;UBERON:0009722!1.04e-17!23;UBERON:0005562!1.04e-17!23;UBERON:0007690!1.04e-17!23;UBERON:0006562!1.05e-16!24;UBERON:0001557!1.05e-16!24;UBERON:0001042!1.05e-16!24;UBERON:0008814!1.05e-16!24;UBERON:0009145!1.05e-16!24;UBERON:0002405!3.35e-16!70;UBERON:0000072!3.74e-14!27;UBERON:0005057!5.74e-14!51;UBERON:0003081!7.32e-14!88;UBERON:0001004!3.13e-12!42;UBERON:0000065!2.40e-11!41;UBERON:0000063!1.47e-09!35;UBERON:0001041!1.39e-07!92;UBERON:0003929!1.90e-07!55;UBERON:0005911!3.84e-07!69;UBERON:0002530!9.32e-07!65;UBERON:0000077!9.97e-07!97|ontology_enrichment_uberon_v019_2=UBERON:0003408,3.24e-19,24;UBERON:0002370,1.04e-16,23;UBERON:0000974,1.04e-16,23;UBERON:0004807,1.04e-16,23;UBERON:0005058,1.04e-16,23;UBERON:0003351,1.04e-16,23;UBERON:0009113,1.04e-16,23;UBERON:0003295,1.04e-16,23;UBERON:0009722,1.04e-16,23;UBERON:0005562,1.04e-16,23;UBERON:0007690,1.04e-16,23;UBERON:0006562,6.05e-16,24;UBERON:0001557,6.05e-16,24;UBERON:0001042,6.05e-16,24;UBERON:0008814,6.05e-16,24;UBERON:0009145,6.05e-16,24;UBERON:0002193,1.12e-14,48;UBERON:0002405,1.12e-14,48;UBERON:0000072,5.41e-14,27;UBERON:0002390,1.24e-13,45;UBERON:0003061,1.24e-13,45;UBERON:0004177,6.45e-13,29;UBERON:0005057,6.45e-13,29;UBERON:0007811,3.38e-12,36;UBERON:0000077,2.01e-10,35;UBERON:0001004,3.44e-10,42;UBERON:0000153,6.57e-10,43;UBERON:0000065,1.17e-08,41;UBERON:0003929,1.95e-07,55;UBERON:0002530,3.27e-07,65;UBERON:0000490,4.74e-07,66|phase1_expression=0,0,0,0,0,0,0,0,0.563154888606667,0.468129052643987,1.71217968225505,0,0.684802919724823,0.611942816932982,0,0.809901069559304,0,3.3123527362615,0.959801035240171,0,0,0.397163804803541,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,1.0470474879476,1.17646297606203,0,0.485510353031154,0,0,0,0,0,0,0,0,0,1.67782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.662524555381181,0.484875253135222,0,0,0,0,0.479260498023681,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0.702213187313235,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.690739927463582,0.289298117163023,3.01582567878545,1.63171705145613,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.683483523191411,0,0.370389054739423,0.941842285023455,0.546776910884101,0.686334519619568,1.35982743995084,1.11961161858926,1.24379976423981,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.948033361884535,0.405450430580328,0.308132871494482,1.42912905275575,0.716106782669926,0.79472541912506,1.80293174279953,1.47689527174577,2.01932899896295,2.209997392995,1.81487133246313,2.92373642219257,1.6356013078856,3.50630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0.231867835620421|short_description=p@chr5:86522288..86522304,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=521 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:86522288..86522304,+ | |||
|id=chr5:86522288..86522304,+ | |||
|ontology_enrichment_celltype=CL:0000988!8.98e-08!32;CL:0002032!8.98e-08!32;CL:0000037!8.98e-08!32;CL:0000566!8.98e-08!32;CL:0000837!8.98e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002476,2.02e-09,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.56e-21!29;UBERON:0002193!3.65e-21!48;UBERON:0002390!3.50e-20!45;UBERON:0003061!3.50e-20!45;UBERON:0003408!7.24e-19!24;UBERON:0002370!1.04e-17!23;UBERON:0000974!1.04e-17!23;UBERON:0004807!1.04e-17!23;UBERON:0005058!1.04e-17!23;UBERON:0003351!1.04e-17!23;UBERON:0009113!1.04e-17!23;UBERON:0003295!1.04e-17!23;UBERON:0009722!1.04e-17!23;UBERON:0005562!1.04e-17!23;UBERON:0007690!1.04e-17!23;UBERON:0006562!1.05e-16!24;UBERON:0001557!1.05e-16!24;UBERON:0001042!1.05e-16!24;UBERON:0008814!1.05e-16!24;UBERON:0009145!1.05e-16!24;UBERON:0002405!3.35e-16!70;UBERON:0000072!3.74e-14!27;UBERON:0005057!5.74e-14!51;UBERON:0003081!7.32e-14!88;UBERON:0001004!3.13e-12!42;UBERON:0000065!2.40e-11!41;UBERON:0000063!1.47e-09!35;UBERON:0001041!1.39e-07!92;UBERON:0003929!1.90e-07!55;UBERON:0005911!3.84e-07!69;UBERON:0002530!9.32e-07!65;UBERON:0000077!9.97e-07!97 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003408,3.24e-19,24;UBERON:0002370,1.04e-16,23;UBERON:0000974,1.04e-16,23;UBERON:0004807,1.04e-16,23;UBERON:0005058,1.04e-16,23;UBERON:0003351,1.04e-16,23;UBERON:0009113,1.04e-16,23;UBERON:0003295,1.04e-16,23;UBERON:0009722,1.04e-16,23;UBERON:0005562,1.04e-16,23;UBERON:0007690,1.04e-16,23;UBERON:0006562,6.05e-16,24;UBERON:0001557,6.05e-16,24;UBERON:0001042,6.05e-16,24;UBERON:0008814,6.05e-16,24;UBERON:0009145,6.05e-16,24;UBERON:0002193,1.12e-14,48;UBERON:0002405,1.12e-14,48;UBERON:0000072,5.41e-14,27;UBERON:0002390,1.24e-13,45;UBERON:0003061,1.24e-13,45;UBERON:0004177,6.45e-13,29;UBERON:0005057,6.45e-13,29;UBERON:0007811,3.38e-12,36;UBERON:0000077,2.01e-10,35;UBERON:0001004,3.44e-10,42;UBERON:0000153,6.57e-10,43;UBERON:0000065,1.17e-08,41;UBERON:0003929,1.95e-07,55;UBERON:0002530,3.27e-07,65;UBERON:0000490,4.74e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.563154888606667,0.468129052643987,1.71217968225505,0,0.684802919724823,0.611942816932982,0,0.809901069559304,0,3.3123527362615,0.959801035240171,0,0,0.397163804803541,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0.418531630736908,0,1.0470474879476,1.17646297606203,0,0.485510353031154,0,0,0,0,0,0,0,0,0,1.67782606057736,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03575153458869,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.662524555381181,0.484875253135222,0,0,0,0,0.479260498023681,0.599902730993408,0.762421362438388,0,0,0,0,0,0,0,0,0.373220911830279,0.505445516867349,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0.702213187313235,0,0,0,0.234526059981096,0.180062061461015,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0.166845105716094,0,0.224862112384854,0.202860121388503,0,0,0,0,0.274561413188081,2.87536413054709,0,0,0,0,0,0.369506380333209,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0.690739927463582,0.289298117163023,3.01582567878545,1.63171705145613,0.491764273019036,0,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291480836629851,0,0.683483523191411,0,0.370389054739423,0.941842285023455,0.546776910884101,0.686334519619568,1.35982743995084,1.11961161858926,1.24379976423981,0,0,0,0,0,0,0,0,0,0,1.24267862617385,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.948033361884535,0.405450430580328,0.308132871494482,1.42912905275575,0.716106782669926,0.79472541912506,1.80293174279953,1.47689527174577,2.01932899896295,2.209997392995,1.81487133246313,2.92373642219257,1.6356013078856,3.50630706544707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.409231043169689,0,0.192906610981141,0,0,0,0,0,0.231867835620421 | |||
|short_description=p@chr5:86522288..86522304,+ | |||
}} |
Revision as of 08:06, 14 September 2013
Short description: | p@chr5:86522288..86522304, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:86522288..86522304, + |
Coexpression cluster: | MCL_coexpression_mm9:521 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow macrophage | 2.02e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
gland of gut | 3.24e-19 | 24 |
thymus | 1.04e-16 | 23 |
neck | 1.04e-16 | 23 |
respiratory system epithelium | 1.04e-16 | 23 |
hemolymphoid system gland | 1.04e-16 | 23 |
pharyngeal epithelium | 1.04e-16 | 23 |
thymic region | 1.04e-16 | 23 |
pharyngeal gland | 1.04e-16 | 23 |
entire pharyngeal arch endoderm | 1.04e-16 | 23 |
thymus primordium | 1.04e-16 | 23 |
early pharyngeal endoderm | 1.04e-16 | 23 |
pharynx | 6.05e-16 | 24 |
upper respiratory tract | 6.05e-16 | 24 |
chordate pharynx | 6.05e-16 | 24 |
pharyngeal arch system | 6.05e-16 | 24 |
pharyngeal region of foregut | 6.05e-16 | 24 |
hemolymphoid system | 1.12e-14 | 48 |
immune system | 1.12e-14 | 48 |
segment of respiratory tract | 5.41e-14 | 27 |
hematopoietic system | 1.24e-13 | 45 |
blood island | 1.24e-13 | 45 |
hemopoietic organ | 6.45e-13 | 29 |
immune organ | 6.45e-13 | 29 |
craniocervical region | 3.38e-12 | 36 |
mixed endoderm/mesoderm-derived structure | 2.01e-10 | 35 |
respiratory system | 3.44e-10 | 42 |
anterior region of body | 6.57e-10 | 43 |
respiratory tract | 1.17e-08 | 41 |
gut epithelium | 1.95e-07 | 55 |
gland | 3.27e-07 | 65 |
unilaminar epithelium | 4.74e-07 | 66 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.