FFCP PHASE1:Mm9::chr7:29225950..29225964,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=63986|HGNC=|MCL_coexpression_id=3|UniProt=A7VJA4,Q9ERL7|association_with_transcript=0bp_to_NM_001039192,uc009fyy.1_5end|description=CAGE_peak_2_at_Gmfg_5end|id=chr7:29225950..29225964,+|ontology_enrichment_celltype=CL:0000988!2.26e-09!32;CL:0002032!2.26e-09!32;CL:0000037!2.26e-09!32;CL:0000566!2.26e-09!32;CL:0000837!2.26e-09!32|ontology_enrichment_celltype_v019_2=CL:0000988,4.24e-15,32;CL:0002032,4.24e-15,32;CL:0000037,4.24e-15,32;CL:0000837,4.24e-15,32;CL:0002320,3.12e-11,46;CL:0000134,3.12e-11,46;CL:0002031,1.58e-10,25;CL:0000738,6.94e-09,17;CL:0002087,6.94e-09,17;CL:0000049,1.27e-08,19;CL:0000838,1.45e-08,12;CL:0000219,2.36e-08,54;CL:0000084,1.07e-07,11;CL:0000827,1.07e-07,11;CL:0000542,1.10e-07,13;CL:0000051,1.10e-07,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!1.86e-18!48;UBERON:0002390!2.07e-17!45;UBERON:0003061!2.07e-17!45;UBERON:0002405!2.15e-16!70;UBERON:0003081!3.16e-11!88;UBERON:0004177!3.45e-11!29;UBERON:0000926!1.02e-10!193;UBERON:0004120!1.02e-10!193;UBERON:0006603!1.02e-10!193;UBERON:0001004!5.47e-10!42;UBERON:0000065!6.51e-10!41;UBERON:0005057!2.26e-09!51;UBERON:0001041!3.53e-09!92;UBERON:0006562!5.79e-09!24;UBERON:0001557!5.79e-09!24;UBERON:0001042!5.79e-09!24;UBERON:0008814!5.79e-09!24;UBERON:0009145!5.79e-09!24;UBERON:0003408!6.47e-09!24;UBERON:0002370!6.72e-09!23;UBERON:0000974!6.72e-09!23;UBERON:0004807!6.72e-09!23;UBERON:0005058!6.72e-09!23;UBERON:0003351!6.72e-09!23;UBERON:0009113!6.72e-09!23;UBERON:0003295!6.72e-09!23;UBERON:0009722!6.72e-09!23;UBERON:0005562!6.72e-09!23;UBERON:0007690!6.72e-09!23;UBERON:0000077!2.84e-08!97;UBERON:0003104!1.43e-07!131;UBERON:0009142!1.43e-07!131;UBERON:0001474!4.13e-07!22;UBERON:0004765!4.13e-07!22;UBERON:0001434!4.13e-07!22;UBERON:0002371!4.45e-07!16|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.10e-27,48;UBERON:0002405,4.10e-27,48;UBERON:0002390,1.73e-26,45;UBERON:0003061,1.73e-26,45;UBERON:0004177,6.74e-18,29;UBERON:0005057,6.74e-18,29;UBERON:0002370,3.27e-15,23;UBERON:0000974,3.27e-15,23;UBERON:0004807,3.27e-15,23;UBERON:0005058,3.27e-15,23;UBERON:0003351,3.27e-15,23;UBERON:0009113,3.27e-15,23;UBERON:0003295,3.27e-15,23;UBERON:0009722,3.27e-15,23;UBERON:0005562,3.27e-15,23;UBERON:0007690,3.27e-15,23;UBERON:0000077,7.95e-15,35;UBERON:0000065,8.00e-15,41;UBERON:0006562,2.66e-14,24;UBERON:0003408,2.66e-14,24;UBERON:0001557,2.66e-14,24;UBERON:0001042,2.66e-14,24;UBERON:0008814,2.66e-14,24;UBERON:0009145,2.66e-14,24;UBERON:0001004,2.99e-14,42;UBERON:0000072,5.45e-12,27;UBERON:0003081,9.49e-12,87;UBERON:0002384,3.12e-11,46;UBERON:0001041,6.69e-11,80;UBERON:0005911,5.30e-10,69;UBERON:0002371,4.38e-09,16;UBERON:0001474,5.18e-09,22;UBERON:0004765,5.18e-09,22;UBERON:0001434,5.18e-09,22;UBERON:0002204,4.13e-08,32;UBERON:0000926,9.77e-08,120;UBERON:0004120,9.77e-08,120;UBERON:0006603,9.77e-08,120;UBERON:0007811,1.76e-07,36;UBERON:0003929,5.42e-07,55;UBERON:0000490,6.06e-07,66|phase1_expression=0.160148847104794,0,0,0,0,0,0,6.71441281896197,2.53419699873,3.04283884218592,1.02730780935303,0.797721589953364,9.58724087614752,12.8507991555926,0.333109761815663,2.63217847606774,1.39912375625629,10.8834447048592,6.30726394586398,8.06340338416257,1.36069264241712,2.38298282882125,1.82839852397255,0.799962113967033,1.37645568640302,0,0,0,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0,0,85.7989843010661,95.3229120319037,98.4224638670741,109.9992882618,96.9924588640993,109.23982943201,0,0,0,0,0,0,0,0,0,7.21465206048266,2.90144856804538,3.02484419228218,0.257259436035947,0,0,0,0,0,0,0,4.49949858640699,0.988866362566974,7.104801149461,0.299600110518405,1.15265491596466,0,0,0,0,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0.142371680799103,0,0.151452386666368,0,4.63783181922684,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.02765491747154,4.40194402200192,0.593768556259299,0.693941307064543,0.608930956624282,0.230615497256059,0.60289056221049,0.470354828542819,0.502666365318702,0,0.289198713839823,5.30766331169925,0.970601099684455,2.65009822152472,1.93950101254089,0,0,0,0.510914110417183,8.8663192134381,7.19883277192089,9.53026703047985,0,0,0,0.173824320192276,0,0,0,0.509196819251581,2.48813941220186,0.252722758433675,0.210441855886474,0,0.229902104433473,0.180062129805349,0.452114453507145,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.351902248327898,0.657587197282725,0,0.696504333044333,0.411564272815887,0.199034266818493,11.2354109970118,9.77922047035918,7.95657798307659,0.828503090142008,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.617068451549513,0.930135779001631,0,0.583826711835847,0.329119699826961,0.32833492815819,0.243206428637567,0.730999937126662,0.658650345873152,0.268412837520744,0,0.102904612379284,0.660837565967596,0,0.213288250535234,0.464473343720877,0.38660238396628,0.403367049246685,0.667134131534611,0.190225626112559,0,0,0,0.198956472041151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| ||
|EntrezGene=63986 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|UniProt=A7VJA4,Q9ERL7 | |||
|association_with_transcript=0bp_to_NM_001039192,uc009fyy.1_5end | |||
|description=CAGE_peak_2_at_Gmfg_5end | |||
|id=chr7:29225950..29225964,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.26e-09!32;CL:0002032!2.26e-09!32;CL:0000037!2.26e-09!32;CL:0000566!2.26e-09!32;CL:0000837!2.26e-09!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.24e-15,32;CL:0002032,4.24e-15,32;CL:0000037,4.24e-15,32;CL:0000837,4.24e-15,32;CL:0002320,3.12e-11,46;CL:0000134,3.12e-11,46;CL:0002031,1.58e-10,25;CL:0000738,6.94e-09,17;CL:0002087,6.94e-09,17;CL:0000049,1.27e-08,19;CL:0000838,1.45e-08,12;CL:0000219,2.36e-08,54;CL:0000084,1.07e-07,11;CL:0000827,1.07e-07,11;CL:0000542,1.10e-07,13;CL:0000051,1.10e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.86e-18!48;UBERON:0002390!2.07e-17!45;UBERON:0003061!2.07e-17!45;UBERON:0002405!2.15e-16!70;UBERON:0003081!3.16e-11!88;UBERON:0004177!3.45e-11!29;UBERON:0000926!1.02e-10!193;UBERON:0004120!1.02e-10!193;UBERON:0006603!1.02e-10!193;UBERON:0001004!5.47e-10!42;UBERON:0000065!6.51e-10!41;UBERON:0005057!2.26e-09!51;UBERON:0001041!3.53e-09!92;UBERON:0006562!5.79e-09!24;UBERON:0001557!5.79e-09!24;UBERON:0001042!5.79e-09!24;UBERON:0008814!5.79e-09!24;UBERON:0009145!5.79e-09!24;UBERON:0003408!6.47e-09!24;UBERON:0002370!6.72e-09!23;UBERON:0000974!6.72e-09!23;UBERON:0004807!6.72e-09!23;UBERON:0005058!6.72e-09!23;UBERON:0003351!6.72e-09!23;UBERON:0009113!6.72e-09!23;UBERON:0003295!6.72e-09!23;UBERON:0009722!6.72e-09!23;UBERON:0005562!6.72e-09!23;UBERON:0007690!6.72e-09!23;UBERON:0000077!2.84e-08!97;UBERON:0003104!1.43e-07!131;UBERON:0009142!1.43e-07!131;UBERON:0001474!4.13e-07!22;UBERON:0004765!4.13e-07!22;UBERON:0001434!4.13e-07!22;UBERON:0002371!4.45e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.10e-27,48;UBERON:0002405,4.10e-27,48;UBERON:0002390,1.73e-26,45;UBERON:0003061,1.73e-26,45;UBERON:0004177,6.74e-18,29;UBERON:0005057,6.74e-18,29;UBERON:0002370,3.27e-15,23;UBERON:0000974,3.27e-15,23;UBERON:0004807,3.27e-15,23;UBERON:0005058,3.27e-15,23;UBERON:0003351,3.27e-15,23;UBERON:0009113,3.27e-15,23;UBERON:0003295,3.27e-15,23;UBERON:0009722,3.27e-15,23;UBERON:0005562,3.27e-15,23;UBERON:0007690,3.27e-15,23;UBERON:0000077,7.95e-15,35;UBERON:0000065,8.00e-15,41;UBERON:0006562,2.66e-14,24;UBERON:0003408,2.66e-14,24;UBERON:0001557,2.66e-14,24;UBERON:0001042,2.66e-14,24;UBERON:0008814,2.66e-14,24;UBERON:0009145,2.66e-14,24;UBERON:0001004,2.99e-14,42;UBERON:0000072,5.45e-12,27;UBERON:0003081,9.49e-12,87;UBERON:0002384,3.12e-11,46;UBERON:0001041,6.69e-11,80;UBERON:0005911,5.30e-10,69;UBERON:0002371,4.38e-09,16;UBERON:0001474,5.18e-09,22;UBERON:0004765,5.18e-09,22;UBERON:0001434,5.18e-09,22;UBERON:0002204,4.13e-08,32;UBERON:0000926,9.77e-08,120;UBERON:0004120,9.77e-08,120;UBERON:0006603,9.77e-08,120;UBERON:0007811,1.76e-07,36;UBERON:0003929,5.42e-07,55;UBERON:0000490,6.06e-07,66 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,6.71441281896197,2.53419699873,3.04283884218592,1.02730780935303,0.797721589953364,9.58724087614752,12.8507991555926,0.333109761815663,2.63217847606774,1.39912375625629,10.8834447048592,6.30726394586398,8.06340338416257,1.36069264241712,2.38298282882125,1.82839852397255,0.799962113967033,1.37645568640302,0,0,0,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0,0,0,85.7989843010661,95.3229120319037,98.4224638670741,109.9992882618,96.9924588640993,109.23982943201,0,0,0,0,0,0,0,0,0,7.21465206048266,2.90144856804538,3.02484419228218,0.257259436035947,0,0,0,0,0,0,0,4.49949858640699,0.988866362566974,7.104801149461,0.299600110518405,1.15265491596466,0,0,0,0,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0.56276261003168,0,0,0.142371680799103,0,0.151452386666368,0,4.63783181922684,0.860423876981386,0,0,0,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,1.02765491747154,4.40194402200192,0.593768556259299,0.693941307064543,0.608930956624282,0.230615497256059,0.60289056221049,0.470354828542819,0.502666365318702,0,0.289198713839823,5.30766331169925,0.970601099684455,2.65009822152472,1.93950101254089,0,0,0,0.510914110417183,8.8663192134381,7.19883277192089,9.53026703047985,0,0,0,0.173824320192276,0,0,0,0.509196819251581,2.48813941220186,0.252722758433675,0.210441855886474,0,0.229902104433473,0.180062129805349,0.452114453507145,0.136072998302656,0.12811372028485,0.0937017245597288,0.258703370739016,0,0,0.351902248327898,0.657587197282725,0,0.696504333044333,0.411564272815887,0.199034266818493,11.2354109970118,9.77922047035918,7.95657798307659,0.828503090142008,0.234526059981096,0.36012412292203,0.23674473558521,0.196764231747404,0.617068451549513,0.930135779001631,0,0.583826711835847,0.329119699826961,0.32833492815819,0.243206428637567,0.730999937126662,0.658650345873152,0.268412837520744,0,0.102904612379284,0.660837565967596,0,0.213288250535234,0.464473343720877,0.38660238396628,0.403367049246685,0.667134131534611,0.190225626112559,0,0,0,0.198956472041151,0.58489226135736,0.898819408654221,0,0.199141273254367,0.379335801906163,0.228497025219458,0,0.407302655690628,0.387904974335251,0.0701358198903186,0.505892296994058,0,0.156998727841375,0.123397163921801,0.592905254174298,0.500535317148282,0.982794975566015,0,0.405720242777006,1.4470629585145,2.80088436959562,3.45235364940973,0.810676133875177,1.64736847912849,0,1.11642284300551,0.936113019343682,1.01031551178845,0.717589654087649,0,2.40179147216586,0.37898282354097,0.651859905768103,1.01847051465113,1.17345124144251,1.84256883185997,1.6663054862021,1.17080188714679,1.26108115284953,0.664394068946325,0.797273843287435,2.13022309130459,1.38147985492716,1.01254341007058,6.03165135757089,3.80733978673097,0.491764273019036,0.551873492609465,0.160550589987792,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0.712262414669021,0.651547837414304,0.494910368917606,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0.712994756769443,0.316036757935816,1.05418608574999,0,0,0,0.129358683782755,0.214337035031592,0,0.356737635204141,0,0,0.704015124191131,0.21183207086382,0,0.16488625294148,0.322928853391811,0.301564624640779,0.358117032009409,0.328281799490123,0.582961673259701,0.18542530201051,3.58828849675491,1.23832120777933,5.18544676635193,2.26042148405629,0.956859594047176,4.34678529092393,8.15896463970505,11.7559219951873,8.56839837587428,0,0.474503990371703,0.813277868507395,0.432021363287205,0.209088296014469,0,0.539457385539283,0.578574190077352,0.26175594198403,0.388844919875379,0.621339313086926,1.12738587736838,0,0,0.194451188344048,0.129159823477731,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0.576060012515731,21.1727450820879,3.04087822935246,5.03283690107653,7.53540773271211,9.667441566044,14.7024202538136,16.8273629327956,12.2582307554899,19.4865248399925,20.27101057023,22.6858916557891,21.4407337627455,24.0529604100824,23.8428880450401,0.680191150845634,0.221985953374065,0.0897138566094757,0.335769232728157,0,0.750729901804728,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0.798049746802062,0.170733605754134,0.243106717068294,0.209613162627982,0.551530525350042,0.44449345560323,0.412070114477788,0.320919209591815,0.505394423527595,0.760437899670719,1.13175804831646,0.561849044819294,0.320125762024346,0.574354689556133,1.42888107384922,0.463537303779422,0.578727661391115,1.23625770240992,0.735994600671987,1.37147700954166,0.354951612318675,0.715308569841963,1.16277133305863,0.564656282491984,0.423073039458382,1.09756783723664,1.05227884575137,0.679020569229309,0.561142271657738,0.474540072496697,0.492522411877817,0.818462086339379,0.619747364743864,1.54325288784913,0,1.16965804222704,0.429742108096597,0.956441660344217,2.42650561031467,0.695603506861264 | |||
|short_description=p2@Gmfg | |||
}} |
Revision as of 13:04, 14 September 2013
Short description: | p2@Gmfg |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gmfg_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 0bp_to_NM_001039192, uc009fyy.1_5end |
EntrezGene: | Gmfg |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.24e-15 | 32 |
hematopoietic oligopotent progenitor cell | 4.24e-15 | 32 |
hematopoietic stem cell | 4.24e-15 | 32 |
hematopoietic multipotent progenitor cell | 4.24e-15 | 32 |
connective tissue cell | 3.12e-11 | 46 |
mesenchymal cell | 3.12e-11 | 46 |
hematopoietic lineage restricted progenitor cell | 1.58e-10 | 25 |
leukocyte | 6.94e-09 | 17 |
nongranular leukocyte | 6.94e-09 | 17 |
common myeloid progenitor | 1.27e-08 | 19 |
lymphoid lineage restricted progenitor cell | 1.45e-08 | 12 |
motile cell | 2.36e-08 | 54 |
T cell | 1.07e-07 | 11 |
pro-T cell | 1.07e-07 | 11 |
lymphocyte | 1.10e-07 | 13 |
common lymphoid progenitor | 1.10e-07 | 13 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.