FFCP PHASE1:Mm9::chr17:14386739..14386748,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:14386739..14386748,+|id=chr17:14386739..14386748,+|ontology_enrichment_celltype=CL:0002250!7.45e-07!3|ontology_enrichment_celltype_v019_2=CL:0002250,1.17e-38,3;CL:0002563,1.90e-13,9;CL:0002251,1.90e-13,9;CL:0002076,2.43e-08,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!7.92e-11!15;UBERON:0000160!2.93e-08!43;UBERON:0001242!4.00e-08!13;UBERON:0000060!4.00e-08!13;UBERON:0001262!4.00e-08!13;UBERON:0004786!4.00e-08!13|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.10e-14,15;UBERON:0003199,1.55e-13,1;UBERON:0003350,1.90e-13,9;UBERON:0004808,1.90e-13,9;UBERON:0001277,1.90e-13,9;UBERON:0000485,3.92e-11,11;UBERON:0000160,1.94e-10,31;UBERON:0001242,1.59e-09,13;UBERON:0001262,1.59e-09,13;UBERON:0004786,1.59e-09,13;UBERON:0004923,6.85e-09,24;UBERON:0001962,2.03e-07,2;UBERON:0001961,2.03e-07,2;UBERON:0001744,2.03e-07,2;UBERON:0001155,2.35e-07,2;UBERON:0000059,2.35e-07,2;UBERON:0005409,5.75e-07,47|phase1_expression=0,0,0,0,0,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.47997726838022,1.37645568640302,0,0,0,0.380046838912748,0,0.665191531965914,0,0,0,8.37669697278696,4.15586613396231,5.3084032628216,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0.457500602818626,0,0.347648640384553,0.767146371990992,0,0.324482526135515,0.305518091550949,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,2.94405927989778,0.102904612379284,0.330418782983798,0,0,0,0,0,0.444756087689741,0,0.949058123089023,0,0,0.596869416123452,0.38992817423824,1.79763881730844,0.216138049874694,0.995706366271836,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:14386739..14386748,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr17:14386739..14386748,+ | |||
|id=chr17:14386739..14386748,+ | |||
|ontology_enrichment_celltype=CL:0002250!7.45e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,1.17e-38,3;CL:0002563,1.90e-13,9;CL:0002251,1.90e-13,9;CL:0002076,2.43e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.92e-11!15;UBERON:0000160!2.93e-08!43;UBERON:0001242!4.00e-08!13;UBERON:0000060!4.00e-08!13;UBERON:0001262!4.00e-08!13;UBERON:0004786!4.00e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,6.10e-14,15;UBERON:0003199,1.55e-13,1;UBERON:0003350,1.90e-13,9;UBERON:0004808,1.90e-13,9;UBERON:0001277,1.90e-13,9;UBERON:0000485,3.92e-11,11;UBERON:0000160,1.94e-10,31;UBERON:0001242,1.59e-09,13;UBERON:0001262,1.59e-09,13;UBERON:0004786,1.59e-09,13;UBERON:0004923,6.85e-09,24;UBERON:0001962,2.03e-07,2;UBERON:0001961,2.03e-07,2;UBERON:0001744,2.03e-07,2;UBERON:0001155,2.35e-07,2;UBERON:0000059,2.35e-07,2;UBERON:0005409,5.75e-07,47 | |||
|phase1_expression=0,0,0,0,0,0.839396359559449,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0.47997726838022,1.37645568640302,0,0,0,0.380046838912748,0,0.665191531965914,0,0,0,8.37669697278696,4.15586613396231,5.3084032628216,0,0,0,0,0,0,0.125896817975577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.307213066512487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02182822083437,0,0,0,0,0.457500602818626,0,0.347648640384553,0.767146371990992,0,0.324482526135515,0.305518091550949,0,0,0,0,0,0,0,0.0680364991513279,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0.0810688095458557,0,0,0.134206418760372,2.94405927989778,0.102904612379284,0.330418782983798,0,0,0,0,0,0.444756087689741,0,0.949058123089023,0,0,0.596869416123452,0.38992817423824,1.79763881730844,0.216138049874694,0.995706366271836,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0,0.194451188344048,0,0,0,0,0.104859344425711,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.45032120322422,0.453142408984205,0,0,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0,0.188626341386076,0.0936415074698824,0,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0.182927972872773,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:14386739..14386748,+ | |||
}} |
Revision as of 13:34, 13 September 2013
Short description: | p@chr17:14386739..14386748, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:14386739..14386748, + |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 1.17e-38 | 3 |
intestinal epithelial cell | 1.90e-13 | 9 |
epithelial cell of alimentary canal | 1.90e-13 | 9 |
endo-epithelial cell | 2.43e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 6.10e-14 | 15 |
egg chamber | 1.55e-13 | 1 |
epithelium of mucosa | 1.90e-13 | 9 |
gastrointestinal system epithelium | 1.90e-13 | 9 |
intestinal epithelium | 1.90e-13 | 9 |
simple columnar epithelium | 3.92e-11 | 11 |
intestine | 1.94e-10 | 31 |
intestinal mucosa | 1.59e-09 | 13 |
wall of intestine | 1.59e-09 | 13 |
gastrointestinal system mucosa | 1.59e-09 | 13 |
organ component layer | 6.85e-09 | 24 |
gut-associated lymphoid tissue | 2.03e-07 | 2 |
mucosa-associated lymphoid tissue | 2.03e-07 | 2 |
lymphoid tissue | 2.03e-07 | 2 |
colon | 2.35e-07 | 2 |
large intestine | 2.35e-07 | 2 |
gastrointestinal system | 5.75e-07 | 47 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.