FFCP PHASE1:Mm9::chr10:80460866..80460877,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=14708|HGNC=|MCL_coexpression_id=90|UniProt=Q61016|association_with_transcript=57bp_to_ENSMUST00000118465_5end|description=CAGE_peak_7_at_Gng7_5end|id=chr10:80460866..80460877,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002791!2.80e-16!29;UBERON:0003528!2.80e-16!29;UBERON:0001893!2.80e-16!29;UBERON:0002780!3.02e-16!39;UBERON:0001890!3.02e-16!39;UBERON:0006240!3.02e-16!39;UBERON:0000955!4.73e-16!50;UBERON:0006238!4.73e-16!50;UBERON:0003080!8.98e-16!40;UBERON:0002616!2.64e-14!49;UBERON:0002020!1.48e-13!34;UBERON:0001049!2.60e-13!52;UBERON:0005068!2.60e-13!52;UBERON:0006241!2.60e-13!52;UBERON:0007135!2.60e-13!52;UBERON:0000956!7.64e-13!21;UBERON:0001869!7.64e-13!21;UBERON:0000203!7.64e-13!21;UBERON:0002619!1.10e-12!17;UBERON:0002021!1.46e-12!10;UBERON:0000411!1.46e-12!10;UBERON:0001950!1.46e-12!10;UBERON:0003056!2.23e-12!49;UBERON:0000033!4.24e-12!63;UBERON:0001017!5.13e-10!73;UBERON:0005743!5.13e-10!73;UBERON:0000073!1.15e-09!75;UBERON:0001016!1.15e-09!75;UBERON:0002346!5.70e-09!71;UBERON:0003075!5.70e-09!71;UBERON:0007284!5.70e-09!71;UBERON:0007811!4.94e-08!86;UBERON:0000153!4.37e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.64e-12,39;UBERON:0001890,3.64e-12,39;UBERON:0006240,3.64e-12,39;UBERON:0003080,7.39e-12,40;UBERON:0001851,4.58e-11,1;UBERON:0005889,4.58e-11,1;UBERON:0002616,2.74e-10,46;UBERON:0000955,4.59e-10,47;UBERON:0006238,4.59e-10,47;UBERON:0003056,1.20e-09,49;UBERON:0001049,4.47e-09,52;UBERON:0005068,4.47e-09,52;UBERON:0006241,4.47e-09,52;UBERON:0007135,4.47e-09,52;UBERON:0000369,7.70e-09,5;UBERON:0002435,7.70e-09,5;UBERON:0000204,7.70e-09,5;UBERON:0010082,7.70e-09,5;UBERON:0000073,9.88e-09,54;UBERON:0003528,1.56e-08,29;UBERON:0002791,1.56e-08,29;UBERON:0001893,1.56e-08,29;UBERON:0002346,2.51e-07,64;UBERON:0003075,2.51e-07,64;UBERON:0007284,2.51e-07,64;UBERON:0002020,2.73e-07,34|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,38.8875512395833,1.7591609295801,4.17178368461463,2.81287003063364,4.98691306942944,12.4925772562173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.68741272937475,0,0.755393897389701,0,0,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0|short_description=p7@Gng7}} | ||
|EntrezGene=14708 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|UniProt=Q61016 | |||
|association_with_transcript=57bp_to_ENSMUST00000118465_5end | |||
|description=CAGE_peak_7_at_Gng7_5end | |||
|id=chr10:80460866..80460877,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002791!2.80e-16!29;UBERON:0003528!2.80e-16!29;UBERON:0001893!2.80e-16!29;UBERON:0002780!3.02e-16!39;UBERON:0001890!3.02e-16!39;UBERON:0006240!3.02e-16!39;UBERON:0000955!4.73e-16!50;UBERON:0006238!4.73e-16!50;UBERON:0003080!8.98e-16!40;UBERON:0002616!2.64e-14!49;UBERON:0002020!1.48e-13!34;UBERON:0001049!2.60e-13!52;UBERON:0005068!2.60e-13!52;UBERON:0006241!2.60e-13!52;UBERON:0007135!2.60e-13!52;UBERON:0000956!7.64e-13!21;UBERON:0001869!7.64e-13!21;UBERON:0000203!7.64e-13!21;UBERON:0002619!1.10e-12!17;UBERON:0002021!1.46e-12!10;UBERON:0000411!1.46e-12!10;UBERON:0001950!1.46e-12!10;UBERON:0003056!2.23e-12!49;UBERON:0000033!4.24e-12!63;UBERON:0001017!5.13e-10!73;UBERON:0005743!5.13e-10!73;UBERON:0000073!1.15e-09!75;UBERON:0001016!1.15e-09!75;UBERON:0002346!5.70e-09!71;UBERON:0003075!5.70e-09!71;UBERON:0007284!5.70e-09!71;UBERON:0007811!4.94e-08!86;UBERON:0000153!4.37e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,3.64e-12,39;UBERON:0001890,3.64e-12,39;UBERON:0006240,3.64e-12,39;UBERON:0003080,7.39e-12,40;UBERON:0001851,4.58e-11,1;UBERON:0005889,4.58e-11,1;UBERON:0002616,2.74e-10,46;UBERON:0000955,4.59e-10,47;UBERON:0006238,4.59e-10,47;UBERON:0003056,1.20e-09,49;UBERON:0001049,4.47e-09,52;UBERON:0005068,4.47e-09,52;UBERON:0006241,4.47e-09,52;UBERON:0007135,4.47e-09,52;UBERON:0000369,7.70e-09,5;UBERON:0002435,7.70e-09,5;UBERON:0000204,7.70e-09,5;UBERON:0010082,7.70e-09,5;UBERON:0000073,9.88e-09,54;UBERON:0003528,1.56e-08,29;UBERON:0002791,1.56e-08,29;UBERON:0001893,1.56e-08,29;UBERON:0002346,2.51e-07,64;UBERON:0003075,2.51e-07,64;UBERON:0007284,2.51e-07,64;UBERON:0002020,2.73e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.919218786610021,0,0,0,0,0,0,0,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0,38.8875512395833,1.7591609295801,4.17178368461463,2.81287003063364,4.98691306942944,12.4925772562173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.68741272937475,0,0.755393897389701,0,0,0.906284817968409,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0.0985044823755635,0,0.154936841185966,0,0,0,0,0,0,0 | |||
|short_description=p7@Gng7 | |||
}} |
Revision as of 17:40, 12 September 2013
Short description: | p7@Gng7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Gng7_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | 57bp_to_ENSMUST00000118465_5end |
EntrezGene: | Gng7 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 3.64e-12 | 39 |
forebrain | 3.64e-12 | 39 |
future forebrain | 3.64e-12 | 39 |
anterior neural tube | 7.39e-12 | 40 |
cortex | 4.58e-11 | 1 |
zygote cortex | 4.58e-11 | 1 |
regional part of brain | 2.74e-10 | 46 |
brain | 4.59e-10 | 47 |
future brain | 4.59e-10 | 47 |
pre-chordal neural plate | 1.20e-09 | 49 |
neural tube | 4.47e-09 | 52 |
neural rod | 4.47e-09 | 52 |
future spinal cord | 4.47e-09 | 52 |
neural keel | 4.47e-09 | 52 |
corpus striatum | 7.70e-09 | 5 |
striatum | 7.70e-09 | 5 |
ventral part of telencephalon | 7.70e-09 | 5 |
future corpus striatum | 7.70e-09 | 5 |
regional part of nervous system | 9.88e-09 | 54 |
brain grey matter | 1.56e-08 | 29 |
regional part of telencephalon | 1.56e-08 | 29 |
telencephalon | 1.56e-08 | 29 |
neurectoderm | 2.51e-07 | 64 |
neural plate | 2.51e-07 | 64 |
presumptive neural plate | 2.51e-07 | 64 |
gray matter | 2.73e-07 | 34 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.