FFCP PHASE1:Mm9::chr10:20847513..20847514,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=4|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:20847513..20847514,-|id=chr10:20847513..20847514,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000625,4.30e-12,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!6.68e-16!23;UBERON:0000974!6.68e-16!23;UBERON:0004807!6.68e-16!23;UBERON:0005058!6.68e-16!23;UBERON:0003351!6.68e-16!23;UBERON:0009113!6.68e-16!23;UBERON:0003295!6.68e-16!23;UBERON:0009722!6.68e-16!23;UBERON:0005562!6.68e-16!23;UBERON:0007690!6.68e-16!23;UBERON:0004177!2.86e-15!29;UBERON:0006562!4.61e-15!24;UBERON:0003408!4.61e-15!24;UBERON:0001557!4.61e-15!24;UBERON:0001042!4.61e-15!24;UBERON:0008814!4.61e-15!24;UBERON:0009145!4.61e-15!24;UBERON:0000072!6.35e-13!27;UBERON:0005057!3.18e-12!51;UBERON:0002390!1.39e-10!45;UBERON:0003061!1.39e-10!45;UBERON:0000065!1.49e-10!41;UBERON:0001004!3.47e-10!42;UBERON:0003929!9.76e-10!55;UBERON:0002193!1.32e-09!48;UBERON:0001041!2.17e-09!92;UBERON:0000077!2.29e-09!97;UBERON:0005911!3.01e-09!69;UBERON:0002405!3.45e-09!70;UBERON:0000063!4.80e-09!35;UBERON:0000949!6.32e-08!72;UBERON:0002368!1.54e-07!60;UBERON:0000490!3.22e-07!66;UBERON:0004119!5.75e-07!130;UBERON:0000925!5.75e-07!130;UBERON:0006595!5.75e-07!130;UBERON:0004921!9.14e-07!126;UBERON:0004185!9.14e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.53e-23,23;UBERON:0000974,2.53e-23,23;UBERON:0004807,2.53e-23,23;UBERON:0005058,2.53e-23,23;UBERON:0003351,2.53e-23,23;UBERON:0009113,2.53e-23,23;UBERON:0003295,2.53e-23,23;UBERON:0009722,2.53e-23,23;UBERON:0005562,2.53e-23,23;UBERON:0007690,2.53e-23,23;UBERON:0006562,2.34e-22,24;UBERON:0003408,2.34e-22,24;UBERON:0001557,2.34e-22,24;UBERON:0001042,2.34e-22,24;UBERON:0008814,2.34e-22,24;UBERON:0009145,2.34e-22,24;UBERON:0000072,6.89e-20,27;UBERON:0004177,1.59e-18,29;UBERON:0005057,1.59e-18,29;UBERON:0000077,2.32e-15,35;UBERON:0007811,6.17e-15,36;UBERON:0000065,4.06e-13,41;UBERON:0001004,8.33e-13,42;UBERON:0000153,1.65e-12,43;UBERON:0002390,5.95e-12,45;UBERON:0003061,5.95e-12,45;UBERON:0002193,3.33e-11,48;UBERON:0002405,3.33e-11,48;UBERON:0003929,9.01e-10,55;UBERON:0002368,5.97e-09,60;UBERON:0002530,2.97e-08,65;UBERON:0000490,3.97e-08,66;UBERON:0005911,9.08e-08,69;UBERON:0000949,1.94e-07,72|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0,0,0,0.274228867211478,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.90422890701429,0.136072998302656,0.512454881139399,0.468508622798644,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0,0,0.170870880797853,0,0,0.376736914009382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.616265742988964,0.51968329191118,0.358053391334963,0.596044064343795,1.08175904567972,2.06765338044408,0.504832249740738,1.295515713135,1.41156659191577,2.63136277997332,1.44317762460494,1.98690733708667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:20847513..20847514,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=4 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr10:20847513..20847514,- | |||
|id=chr10:20847513..20847514,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,4.30e-12,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!6.68e-16!23;UBERON:0000974!6.68e-16!23;UBERON:0004807!6.68e-16!23;UBERON:0005058!6.68e-16!23;UBERON:0003351!6.68e-16!23;UBERON:0009113!6.68e-16!23;UBERON:0003295!6.68e-16!23;UBERON:0009722!6.68e-16!23;UBERON:0005562!6.68e-16!23;UBERON:0007690!6.68e-16!23;UBERON:0004177!2.86e-15!29;UBERON:0006562!4.61e-15!24;UBERON:0003408!4.61e-15!24;UBERON:0001557!4.61e-15!24;UBERON:0001042!4.61e-15!24;UBERON:0008814!4.61e-15!24;UBERON:0009145!4.61e-15!24;UBERON:0000072!6.35e-13!27;UBERON:0005057!3.18e-12!51;UBERON:0002390!1.39e-10!45;UBERON:0003061!1.39e-10!45;UBERON:0000065!1.49e-10!41;UBERON:0001004!3.47e-10!42;UBERON:0003929!9.76e-10!55;UBERON:0002193!1.32e-09!48;UBERON:0001041!2.17e-09!92;UBERON:0000077!2.29e-09!97;UBERON:0005911!3.01e-09!69;UBERON:0002405!3.45e-09!70;UBERON:0000063!4.80e-09!35;UBERON:0000949!6.32e-08!72;UBERON:0002368!1.54e-07!60;UBERON:0000490!3.22e-07!66;UBERON:0004119!5.75e-07!130;UBERON:0000925!5.75e-07!130;UBERON:0006595!5.75e-07!130;UBERON:0004921!9.14e-07!126;UBERON:0004185!9.14e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.53e-23,23;UBERON:0000974,2.53e-23,23;UBERON:0004807,2.53e-23,23;UBERON:0005058,2.53e-23,23;UBERON:0003351,2.53e-23,23;UBERON:0009113,2.53e-23,23;UBERON:0003295,2.53e-23,23;UBERON:0009722,2.53e-23,23;UBERON:0005562,2.53e-23,23;UBERON:0007690,2.53e-23,23;UBERON:0006562,2.34e-22,24;UBERON:0003408,2.34e-22,24;UBERON:0001557,2.34e-22,24;UBERON:0001042,2.34e-22,24;UBERON:0008814,2.34e-22,24;UBERON:0009145,2.34e-22,24;UBERON:0000072,6.89e-20,27;UBERON:0004177,1.59e-18,29;UBERON:0005057,1.59e-18,29;UBERON:0000077,2.32e-15,35;UBERON:0007811,6.17e-15,36;UBERON:0000065,4.06e-13,41;UBERON:0001004,8.33e-13,42;UBERON:0000153,1.65e-12,43;UBERON:0002390,5.95e-12,45;UBERON:0003061,5.95e-12,45;UBERON:0002193,3.33e-11,48;UBERON:0002405,3.33e-11,48;UBERON:0003929,9.01e-10,55;UBERON:0002368,5.97e-09,60;UBERON:0002530,2.97e-08,65;UBERON:0000490,3.97e-08,66;UBERON:0005911,9.08e-08,69;UBERON:0000949,1.94e-07,72 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0.171200729931206,0,0,0,0,0,0.274228867211478,0,0,0.198581902401771,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,1.34437519656986,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0.127070227073065,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0.90422890701429,0.136072998302656,0.512454881139399,0.468508622798644,0,0,0,0,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0.196558995113203,0.449724224769707,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0.119372344003136,0,0,0,0.170870880797853,0,0,0.376736914009382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.259229946583586,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0.316011120628178,0.202725215290164,0.616265742988964,0.51968329191118,0.358053391334963,0.596044064343795,1.08175904567972,2.06765338044408,0.504832249740738,1.295515713135,1.41156659191577,2.63136277997332,1.44317762460494,1.98690733708667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.412070114477788,0,0,0,0,0,0,0,0,0,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:20847513..20847514,- | |||
}} |
Revision as of 16:24, 12 September 2013
Short description: | p@chr10:20847513..20847514, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:20847513..20847514, - |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 4.30e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
thymus | 2.53e-23 | 23 |
neck | 2.53e-23 | 23 |
respiratory system epithelium | 2.53e-23 | 23 |
hemolymphoid system gland | 2.53e-23 | 23 |
pharyngeal epithelium | 2.53e-23 | 23 |
thymic region | 2.53e-23 | 23 |
pharyngeal gland | 2.53e-23 | 23 |
entire pharyngeal arch endoderm | 2.53e-23 | 23 |
thymus primordium | 2.53e-23 | 23 |
early pharyngeal endoderm | 2.53e-23 | 23 |
pharynx | 2.34e-22 | 24 |
gland of gut | 2.34e-22 | 24 |
upper respiratory tract | 2.34e-22 | 24 |
chordate pharynx | 2.34e-22 | 24 |
pharyngeal arch system | 2.34e-22 | 24 |
pharyngeal region of foregut | 2.34e-22 | 24 |
segment of respiratory tract | 6.89e-20 | 27 |
hemopoietic organ | 1.59e-18 | 29 |
immune organ | 1.59e-18 | 29 |
mixed endoderm/mesoderm-derived structure | 2.32e-15 | 35 |
craniocervical region | 6.17e-15 | 36 |
respiratory tract | 4.06e-13 | 41 |
respiratory system | 8.33e-13 | 42 |
anterior region of body | 1.65e-12 | 43 |
hematopoietic system | 5.95e-12 | 45 |
blood island | 5.95e-12 | 45 |
hemolymphoid system | 3.33e-11 | 48 |
immune system | 3.33e-11 | 48 |
gut epithelium | 9.01e-10 | 55 |
endocrine gland | 5.97e-09 | 60 |
gland | 2.97e-08 | 65 |
unilaminar epithelium | 3.97e-08 | 66 |
endo-epithelium | 9.08e-08 | 69 |
endocrine system | 1.94e-07 | 72 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.