FFCP PHASE1:Mm9::chr17:86020115..86020128,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=20473|HGNC=|MCL_coexpression_id=492|UniProt=Q62233|association_with_transcript=-45bp_to_NM_011381,uc008dub.2_5end|description=CAGE_peak_2_at_Six3_5end|id=chr17:86020115..86020128,+|ontology_enrichment_celltype=CL:0000117!4.79e-08!23;CL:0000337!4.79e-08!23;CL:0002319!5.95e-08!43;CL:0000221!1.30e-07!44;CL:0000133!1.30e-07!44|ontology_enrichment_celltype_v019_2=CL:0002319,9.39e-09,43;CL:0000221,1.96e-08,44;CL:0000133,1.96e-08,44;CL:0002453,2.08e-08,8;CL:0000117,4.86e-08,23;CL:0000337,4.86e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!5.84e-25!49;UBERON:0000033!3.18e-20!63;UBERON:0003080!8.97e-16!40;UBERON:0002780!5.74e-15!39;UBERON:0001890!5.74e-15!39;UBERON:0006240!5.74e-15!39;UBERON:0002616!1.34e-14!49;UBERON:0002346!3.31e-14!71;UBERON:0003075!3.31e-14!71;UBERON:0007284!3.31e-14!71;UBERON:0000955!4.28e-14!50;UBERON:0006238!4.28e-14!50;UBERON:0004121!1.67e-13!102;UBERON:0000924!1.67e-13!102;UBERON:0006601!1.67e-13!102;UBERON:0001017!3.97e-13!73;UBERON:0005743!3.97e-13!73;UBERON:0000073!1.94e-12!75;UBERON:0001016!1.94e-12!75;UBERON:0007811!9.43e-12!86;UBERON:0001894!1.62e-11!10;UBERON:0006222!1.62e-11!10;UBERON:0000970!2.84e-11!9;UBERON:0000019!2.84e-11!9;UBERON:0000047!2.84e-11!9;UBERON:0004088!2.84e-11!9;UBERON:0002104!2.84e-11!9;UBERON:0001456!2.84e-11!9;UBERON:0003072!2.84e-11!9;UBERON:0003071!2.84e-11!9;UBERON:0004128!2.84e-11!9;UBERON:0001049!5.10e-11!52;UBERON:0005068!5.10e-11!52;UBERON:0006241!5.10e-11!52;UBERON:0007135!5.10e-11!52;UBERON:0000007!7.90e-10!8;UBERON:0003296!7.90e-10!8;UBERON:0010133!7.90e-10!8;UBERON:0000153!1.20e-09!94;UBERON:0001444!1.12e-08!11;UBERON:0002420!5.33e-08!8;UBERON:0007245!5.33e-08!8;UBERON:0010009!5.33e-08!8;UBERON:0010011!5.33e-08!8;UBERON:0000454!5.33e-08!8;UBERON:0000020!1.03e-07!12;UBERON:0001032!1.03e-07!12;UBERON:0004456!1.03e-07!12;UBERON:0001954!4.37e-07!7;UBERON:0003022!4.37e-07!7;UBERON:0002421!4.37e-07!7;UBERON:0000349!4.37e-07!7;UBERON:0002600!4.37e-07!7;UBERON:0005085!6.64e-07!13;UBERON:0002791!6.80e-07!29;UBERON:0003528!6.80e-07!29;UBERON:0001893!6.80e-07!29|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.24e-26,49;UBERON:0002346,2.44e-19,64;UBERON:0003075,2.44e-19,64;UBERON:0007284,2.44e-19,64;UBERON:0004121,4.68e-19,95;UBERON:0000924,4.68e-19,95;UBERON:0006601,4.68e-19,95;UBERON:0010371,1.01e-15,73;UBERON:0003080,4.41e-15,40;UBERON:0001894,5.08e-15,10;UBERON:0006222,5.08e-15,10;UBERON:0000970,1.08e-14,9;UBERON:0000019,1.08e-14,9;UBERON:0000047,1.08e-14,9;UBERON:0010312,1.08e-14,9;UBERON:0004088,1.08e-14,9;UBERON:0002104,1.08e-14,9;UBERON:0001456,1.08e-14,9;UBERON:0003072,1.08e-14,9;UBERON:0004128,1.08e-14,9;UBERON:0003071,1.08e-14,9;UBERON:0001017,2.26e-14,73;UBERON:0002780,4.13e-14,39;UBERON:0001890,4.13e-14,39;UBERON:0006240,4.13e-14,39;UBERON:0001016,9.77e-14,75;UBERON:0002616,1.32e-13,46;UBERON:0000955,3.63e-13,47;UBERON:0006238,3.63e-13,47;UBERON:0000073,9.21e-13,54;UBERON:0000007,9.71e-13,8;UBERON:0003296,9.71e-13,8;UBERON:0010133,9.71e-13,8;UBERON:0001444,1.42e-11,11;UBERON:0001049,3.14e-11,52;UBERON:0005068,3.14e-11,52;UBERON:0006241,3.14e-11,52;UBERON:0007135,3.14e-11,52;UBERON:0010314,1.71e-10,92;UBERON:0000020,2.08e-10,12;UBERON:0001032,2.08e-10,12;UBERON:0004456,2.08e-10,12;UBERON:0000033,2.00e-09,13;UBERON:0005085,2.00e-09,13;UBERON:0002420,2.32e-08,8;UBERON:0007245,2.32e-08,8;UBERON:0010009,2.32e-08,8;UBERON:0010011,2.32e-08,8;UBERON:0000454,2.32e-08,8;UBERON:0000369,4.30e-08,5;UBERON:0002435,4.30e-08,5;UBERON:0000204,4.30e-08,5;UBERON:0010082,4.30e-08,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.247182349881,5.93152693383074,12.6379434398284,3.21968769738334,4.31257693094915,0,0,0,0,0,0,7.28339259094552,3.70293685490423,4.43681982454325,0.677689064138264,0,0,0,0,2.39680088414724,5.76327457982332,0.103689612308478,0.135005938331691,0,0,0,9.55428233876641,11.5014565221884,17.4651569455904,0,2.29837208553338,1.99688493233117,13.0567424852892,12.4423195299277,16.6692278578163,1.11673199600552,0.56276261003168,1.83357897332172,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49371918214468,5.03250663100489,9.29842205635197,0.173824320192276,0.767146371990992,5.40248915854856,4.05603157669394,0,0,0,3.57751155007006,22.380716189585,24.3696230699481,57.7999436675171,55.4593729635431,64.1584186997022,56.3700369253339,58.75098129895,8.79591460512653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,10.5536277783674,19.4465981553815,17.0753462593236,13.2888961719587,18.798064766081,15.161349496176,10.6956863391379,13.3964577610424,0,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| ||
|EntrezGene=20473 | |||
|HGNC= | |||
|MCL_coexpression_id=492 | |||
|UniProt=Q62233 | |||
|association_with_transcript=-45bp_to_NM_011381,uc008dub.2_5end | |||
|description=CAGE_peak_2_at_Six3_5end | |||
|id=chr17:86020115..86020128,+ | |||
|ontology_enrichment_celltype=CL:0000117!4.79e-08!23;CL:0000337!4.79e-08!23;CL:0002319!5.95e-08!43;CL:0000221!1.30e-07!44;CL:0000133!1.30e-07!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,9.39e-09,43;CL:0000221,1.96e-08,44;CL:0000133,1.96e-08,44;CL:0002453,2.08e-08,8;CL:0000117,4.86e-08,23;CL:0000337,4.86e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!5.84e-25!49;UBERON:0000033!3.18e-20!63;UBERON:0003080!8.97e-16!40;UBERON:0002780!5.74e-15!39;UBERON:0001890!5.74e-15!39;UBERON:0006240!5.74e-15!39;UBERON:0002616!1.34e-14!49;UBERON:0002346!3.31e-14!71;UBERON:0003075!3.31e-14!71;UBERON:0007284!3.31e-14!71;UBERON:0000955!4.28e-14!50;UBERON:0006238!4.28e-14!50;UBERON:0004121!1.67e-13!102;UBERON:0000924!1.67e-13!102;UBERON:0006601!1.67e-13!102;UBERON:0001017!3.97e-13!73;UBERON:0005743!3.97e-13!73;UBERON:0000073!1.94e-12!75;UBERON:0001016!1.94e-12!75;UBERON:0007811!9.43e-12!86;UBERON:0001894!1.62e-11!10;UBERON:0006222!1.62e-11!10;UBERON:0000970!2.84e-11!9;UBERON:0000019!2.84e-11!9;UBERON:0000047!2.84e-11!9;UBERON:0004088!2.84e-11!9;UBERON:0002104!2.84e-11!9;UBERON:0001456!2.84e-11!9;UBERON:0003072!2.84e-11!9;UBERON:0003071!2.84e-11!9;UBERON:0004128!2.84e-11!9;UBERON:0001049!5.10e-11!52;UBERON:0005068!5.10e-11!52;UBERON:0006241!5.10e-11!52;UBERON:0007135!5.10e-11!52;UBERON:0000007!7.90e-10!8;UBERON:0003296!7.90e-10!8;UBERON:0010133!7.90e-10!8;UBERON:0000153!1.20e-09!94;UBERON:0001444!1.12e-08!11;UBERON:0002420!5.33e-08!8;UBERON:0007245!5.33e-08!8;UBERON:0010009!5.33e-08!8;UBERON:0010011!5.33e-08!8;UBERON:0000454!5.33e-08!8;UBERON:0000020!1.03e-07!12;UBERON:0001032!1.03e-07!12;UBERON:0004456!1.03e-07!12;UBERON:0001954!4.37e-07!7;UBERON:0003022!4.37e-07!7;UBERON:0002421!4.37e-07!7;UBERON:0000349!4.37e-07!7;UBERON:0002600!4.37e-07!7;UBERON:0005085!6.64e-07!13;UBERON:0002791!6.80e-07!29;UBERON:0003528!6.80e-07!29;UBERON:0001893!6.80e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,2.24e-26,49;UBERON:0002346,2.44e-19,64;UBERON:0003075,2.44e-19,64;UBERON:0007284,2.44e-19,64;UBERON:0004121,4.68e-19,95;UBERON:0000924,4.68e-19,95;UBERON:0006601,4.68e-19,95;UBERON:0010371,1.01e-15,73;UBERON:0003080,4.41e-15,40;UBERON:0001894,5.08e-15,10;UBERON:0006222,5.08e-15,10;UBERON:0000970,1.08e-14,9;UBERON:0000019,1.08e-14,9;UBERON:0000047,1.08e-14,9;UBERON:0010312,1.08e-14,9;UBERON:0004088,1.08e-14,9;UBERON:0002104,1.08e-14,9;UBERON:0001456,1.08e-14,9;UBERON:0003072,1.08e-14,9;UBERON:0004128,1.08e-14,9;UBERON:0003071,1.08e-14,9;UBERON:0001017,2.26e-14,73;UBERON:0002780,4.13e-14,39;UBERON:0001890,4.13e-14,39;UBERON:0006240,4.13e-14,39;UBERON:0001016,9.77e-14,75;UBERON:0002616,1.32e-13,46;UBERON:0000955,3.63e-13,47;UBERON:0006238,3.63e-13,47;UBERON:0000073,9.21e-13,54;UBERON:0000007,9.71e-13,8;UBERON:0003296,9.71e-13,8;UBERON:0010133,9.71e-13,8;UBERON:0001444,1.42e-11,11;UBERON:0001049,3.14e-11,52;UBERON:0005068,3.14e-11,52;UBERON:0006241,3.14e-11,52;UBERON:0007135,3.14e-11,52;UBERON:0010314,1.71e-10,92;UBERON:0000020,2.08e-10,12;UBERON:0001032,2.08e-10,12;UBERON:0004456,2.08e-10,12;UBERON:0000033,2.00e-09,13;UBERON:0005085,2.00e-09,13;UBERON:0002420,2.32e-08,8;UBERON:0007245,2.32e-08,8;UBERON:0010009,2.32e-08,8;UBERON:0010011,2.32e-08,8;UBERON:0000454,2.32e-08,8;UBERON:0000369,4.30e-08,5;UBERON:0002435,4.30e-08,5;UBERON:0000204,4.30e-08,5;UBERON:0010082,4.30e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.247182349881,5.93152693383074,12.6379434398284,3.21968769738334,4.31257693094915,0,0,0,0,0,0,7.28339259094552,3.70293685490423,4.43681982454325,0.677689064138264,0,0,0,0,2.39680088414724,5.76327457982332,0.103689612308478,0.135005938331691,0,0,0,9.55428233876641,11.5014565221884,17.4651569455904,0,2.29837208553338,1.99688493233117,13.0567424852892,12.4423195299277,16.6692278578163,1.11673199600552,0.56276261003168,1.83357897332172,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.49371918214468,5.03250663100489,9.29842205635197,0.173824320192276,0.767146371990992,5.40248915854856,4.05603157669394,0,0,0,3.57751155007006,22.380716189585,24.3696230699481,57.7999436675171,55.4593729635431,64.1584186997022,56.3700369253339,58.75098129895,8.79591460512653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0.210289948564127,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1270773567308,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238968797952552,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,10.5536277783674,19.4465981553815,17.0753462593236,13.2888961719587,18.798064766081,15.161349496176,10.6956863391379,13.3964577610424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0.62799699626633,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55681021376265,1.99512436700516,1.02440163452481,1.21553358534147,0.628839487883947,1.2869045591501,0.888986911206461,1.44224540067226,0,0.252697211763798,0.25347929989024,0.754505365544305,1.591905626988,1.08842759088278,1.60819313075717,1.42888107384922,1.62238056322798,0.77163688185482,1.23625770240992,1.03039244094078,0.342869252385415,0.354951612318675,0.476872379894642,2.32554266611726,1.12931256498397,1.4384483341585,0.73171189149109,1.57841826862706,0.271608227691724,1.12228454331548,1.30498519936592,1.28055827088233,0.409231043169689,0.77468420592983,1.15743966588685,2.99772693525535,1.40358965067245,0.429742108096597,0,0,0 | |||
|short_description=p2@Six3 | |||
}} |
Revision as of 15:31, 13 September 2013
Short description: | p2@Six3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Six3_5end |
Coexpression cluster: | MCL_coexpression_mm9:492 |
Association with transcript: | -45bp_to_NM_011381, uc008dub.2_5end |
EntrezGene: | Six3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 9.39e-09 | 43 |
ectodermal cell | 1.96e-08 | 44 |
neurectodermal cell | 1.96e-08 | 44 |
oligodendrocyte precursor cell | 2.08e-08 | 8 |
CNS neuron (sensu Vertebrata) | 4.86e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.86e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.