FFCP PHASE1:Mm9::chr1:153099939..153099982,-: Difference between revisions
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|id=chr1:153099939..153099982,- | |id=chr1:153099939..153099982,- | ||
|ontology_enrichment_celltype=CL:0002250!7.09e-10!3;CL:0002563!1.74e-08!9;CL:0002251!1.74e-08!9 | |ontology_enrichment_celltype=CL:0002250!7.09e-10!3;CL:0002563!1.74e-08!9;CL:0002251!1.74e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002250,6.99e-27,3;CL:0002563,7.70e-25,9;CL:0002251,7.70e-25,9;CL:0002076,5.51e-15,15;CL:0000223,2.86e-11,20;CL:0000066,4.98e-09,25;CL:0000239,4.99e-07,6;CL:0000677,4.99e-07,6;CL:0000584,4.99e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.62e-12!15;UBERON:0005409!7.36e-12!59;UBERON:0001007!1.16e-11!128;UBERON:0001555!1.16e-11!128;UBERON:0007026!1.16e-11!128;UBERON:0004119!2.16e-11!130;UBERON:0000925!2.16e-11!130;UBERON:0006595!2.16e-11!130;UBERON:0000160!1.91e-10!43;UBERON:0004921!1.18e-09!126;UBERON:0004185!1.18e-09!126;UBERON:0003350!1.74e-08!9;UBERON:0004808!1.74e-08!9;UBERON:0001277!1.74e-08!9;UBERON:0001242!4.45e-08!13;UBERON:0000060!4.45e-08!13;UBERON:0001262!4.45e-08!13;UBERON:0004786!4.45e-08!13;UBERON:0001155!5.49e-07!2;UBERON:0000059!5.49e-07!2;UBERON:0004923!5.94e-07!24;UBERON:0001962!6.69e-07!2;UBERON:0001961!6.69e-07!2;UBERON:0001744!6.69e-07!2;UBERON:0000485!7.33e-07!11 | |ontology_enrichment_uberon=UBERON:0000344!5.62e-12!15;UBERON:0005409!7.36e-12!59;UBERON:0001007!1.16e-11!128;UBERON:0001555!1.16e-11!128;UBERON:0007026!1.16e-11!128;UBERON:0004119!2.16e-11!130;UBERON:0000925!2.16e-11!130;UBERON:0006595!2.16e-11!130;UBERON:0000160!1.91e-10!43;UBERON:0004921!1.18e-09!126;UBERON:0004185!1.18e-09!126;UBERON:0003350!1.74e-08!9;UBERON:0004808!1.74e-08!9;UBERON:0001277!1.74e-08!9;UBERON:0001242!4.45e-08!13;UBERON:0000060!4.45e-08!13;UBERON:0001262!4.45e-08!13;UBERON:0004786!4.45e-08!13;UBERON:0001155!5.49e-07!2;UBERON:0000059!5.49e-07!2;UBERON:0004923!5.94e-07!24;UBERON:0001962!6.69e-07!2;UBERON:0001961!6.69e-07!2;UBERON:0001744!6.69e-07!2;UBERON:0000485!7.33e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.10e-28,15;UBERON:0003350,7.70e-25,9;UBERON:0004808,7.70e-25,9;UBERON:0001277,7.70e-25,9;UBERON:0001242,1.45e-24,13;UBERON:0001262,1.45e-24,13;UBERON:0004786,1.45e-24,13;UBERON:0000160,1.56e-22,31;UBERON:0000485,2.29e-20,11;UBERON:0001155,4.35e-18,2;UBERON:0000059,4.35e-18,2;UBERON:0004923,7.00e-18,24;UBERON:0005409,9.78e-15,47;UBERON:0001153,4.59e-10,1;UBERON:0001045,4.59e-10,1;UBERON:0001007,4.64e-07,116;UBERON:0001555,4.64e-07,116;UBERON:0007026,4.64e-07,116;UBERON:0004119,6.28e-07,118;UBERON:0000925,6.28e-07,118;UBERON:0006595,6.28e-07,118 | |||
|phase1_expression=0,0,0,0,0,8.2260843236826,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,0.91763712426868,0,0.86152399231815,0.861884930743556,0,0,0,0,0,0,4.04392267651784,1.16364251750945,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,1.29682829924817,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0.25984164595559,0.537080087002444,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0,0.584747284438515,0,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,8.2260843236826,7.00837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43993180514066,0.91763712426868,0,0.86152399231815,0.861884930743556,0,0,0,0,0,0,4.04392267651784,1.16364251750945,2.45003227514843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.97376904685418,0.264450566663544,0,0,0,0,0,0,0,0,0,0,0.19496408711912,0.898819408654221,1.29682829924817,0.796565093017469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0,0,0,0,0.0826534557253359,0.26175594198403,0.388844919875379,0,0,0,0,0,0,0,0,0,0,0,0,0.632022241256357,0,0,0.25984164595559,0.537080087002444,0.39736270956253,0,0,0.100966449948148,0.0762068066549998,0,0.584747284438515,0,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:153099939..153099982,- | |short_description=p@chr1:153099939..153099982,- | ||
}} | }} |
Revision as of 14:29, 13 November 2012
Short description: | p@chr1:153099939..153099982, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:153099939..153099982, - |
Coexpression cluster: | MCL_coexpression_mm9:331 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 6.99e-27 | 3 |
intestinal epithelial cell | 7.70e-25 | 9 |
epithelial cell of alimentary canal | 7.70e-25 | 9 |
endo-epithelial cell | 5.51e-15 | 15 |
endodermal cell | 2.86e-11 | 20 |
epithelial cell | 4.98e-09 | 25 |
brush border epithelial cell | 4.99e-07 | 6 |
gut absorptive cell | 4.99e-07 | 6 |
enterocyte | 4.99e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.10e-28 | 15 |
epithelium of mucosa | 7.70e-25 | 9 |
gastrointestinal system epithelium | 7.70e-25 | 9 |
intestinal epithelium | 7.70e-25 | 9 |
intestinal mucosa | 1.45e-24 | 13 |
wall of intestine | 1.45e-24 | 13 |
gastrointestinal system mucosa | 1.45e-24 | 13 |
intestine | 1.56e-22 | 31 |
simple columnar epithelium | 2.29e-20 | 11 |
colon | 4.35e-18 | 2 |
large intestine | 4.35e-18 | 2 |
organ component layer | 7.00e-18 | 24 |
gastrointestinal system | 9.78e-15 | 47 |
caecum | 4.59e-10 | 1 |
midgut | 4.59e-10 | 1 |
digestive system | 4.64e-07 | 116 |
digestive tract | 4.64e-07 | 116 |
primitive gut | 4.64e-07 | 116 |
endoderm-derived structure | 6.28e-07 | 118 |
endoderm | 6.28e-07 | 118 |
presumptive endoderm | 6.28e-07 | 118 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.