FFCP PHASE1:Mm9::chr9:56996102..56996132,-: Difference between revisions
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|id=chr9:56996102..56996132,- | |id=chr9:56996102..56996132,- | ||
|ontology_enrichment_celltype=CL:0000838!2.41e-07!12 | |ontology_enrichment_celltype=CL:0000838!2.41e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000838,3.52e-10,12;CL:0000542,3.96e-09,13;CL:0000051,3.96e-09,13;CL:0000084,4.03e-09,11;CL:0000827,4.03e-09,11;CL:0002031,5.06e-09,25;CL:0000791,1.56e-07,9;CL:0000789,1.56e-07,9;CL:0002420,1.56e-07,9;CL:0002419,1.56e-07,9;CL:0000790,1.56e-07,9;CL:0000738,3.08e-07,17;CL:0002087,3.08e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!1.30e-10!29;UBERON:0000063!1.14e-09!35;UBERON:0003408!2.93e-09!24;UBERON:0002370!7.51e-09!23;UBERON:0000974!7.51e-09!23;UBERON:0004807!7.51e-09!23;UBERON:0005058!7.51e-09!23;UBERON:0003351!7.51e-09!23;UBERON:0009113!7.51e-09!23;UBERON:0003295!7.51e-09!23;UBERON:0009722!7.51e-09!23;UBERON:0005562!7.51e-09!23;UBERON:0007690!7.51e-09!23;UBERON:0001004!2.10e-08!42;UBERON:0006562!3.52e-08!24;UBERON:0001557!3.52e-08!24;UBERON:0001042!3.52e-08!24;UBERON:0008814!3.52e-08!24;UBERON:0009145!3.52e-08!24;UBERON:0000065!4.95e-08!41;UBERON:0002193!9.93e-08!48;UBERON:0000072!3.10e-07!27;UBERON:0002390!8.63e-07!45;UBERON:0003061!8.63e-07!45 | |ontology_enrichment_uberon=UBERON:0004177!1.30e-10!29;UBERON:0000063!1.14e-09!35;UBERON:0003408!2.93e-09!24;UBERON:0002370!7.51e-09!23;UBERON:0000974!7.51e-09!23;UBERON:0004807!7.51e-09!23;UBERON:0005058!7.51e-09!23;UBERON:0003351!7.51e-09!23;UBERON:0009113!7.51e-09!23;UBERON:0003295!7.51e-09!23;UBERON:0009722!7.51e-09!23;UBERON:0005562!7.51e-09!23;UBERON:0007690!7.51e-09!23;UBERON:0001004!2.10e-08!42;UBERON:0006562!3.52e-08!24;UBERON:0001557!3.52e-08!24;UBERON:0001042!3.52e-08!24;UBERON:0008814!3.52e-08!24;UBERON:0009145!3.52e-08!24;UBERON:0000065!4.95e-08!41;UBERON:0002193!9.93e-08!48;UBERON:0000072!3.10e-07!27;UBERON:0002390!8.63e-07!45;UBERON:0003061!8.63e-07!45 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,2.30e-18,29;UBERON:0005057,2.30e-18,29;UBERON:0003408,2.53e-16,24;UBERON:0000077,4.61e-16,35;UBERON:0002370,1.26e-15,23;UBERON:0000974,1.26e-15,23;UBERON:0004807,1.26e-15,23;UBERON:0005058,1.26e-15,23;UBERON:0003351,1.26e-15,23;UBERON:0009113,1.26e-15,23;UBERON:0003295,1.26e-15,23;UBERON:0009722,1.26e-15,23;UBERON:0005562,1.26e-15,23;UBERON:0007690,1.26e-15,23;UBERON:0002193,2.27e-15,48;UBERON:0002405,2.27e-15,48;UBERON:0001004,6.33e-15,42;UBERON:0006562,1.12e-14,24;UBERON:0001557,1.12e-14,24;UBERON:0001042,1.12e-14,24;UBERON:0008814,1.12e-14,24;UBERON:0009145,1.12e-14,24;UBERON:0002390,1.65e-14,45;UBERON:0003061,1.65e-14,45;UBERON:0000065,2.86e-14,41;UBERON:0000072,2.48e-13,27;UBERON:0001041,1.24e-09,80;UBERON:0003081,2.30e-09,87;UBERON:0007811,1.57e-08,36;UBERON:0005911,5.18e-08,69;UBERON:0000153,7.89e-07,43 | |||
|phase1_expression=0.480446541314382,1.04692622291808,1.81999695755814,0,0,0,0.233612640595526,5.93967287831251,3.37892933164,2.80877431586392,1.54096171402954,0.797721589953364,5.13602189793617,2.62261207256992,0.999329285446988,1.82227740650843,0.699561878128147,6.62470547252299,6.17014951225825,7.21462408056651,0.850432901510698,3.07801948722744,2.08959831311148,0.95995453676044,2.06468352960453,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0.221730510655305,0,1.23012957516914,0,0.288851619751275,0,0.204169356262369,0,0.7813353445238,0,0.588231488031014,0,0,0,0.202753862439029,0,0.782391344348039,0.872100625521786,0.659058548203415,0.388859798148567,0.419959264876088,0,10.2347389695219,11.6057942721815,9.41062637598899,0,0.286533439938757,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,0.103689612308478,0.135005938331691,0.420649922702764,0.856952953211411,0.662605622854841,0.244981598429908,0.383381884072945,0,0,0.766124028511126,0.46081959976873,1.05509030184155,0.182975287204819,0.52091337055676,0.279182999001381,1.12552522006336,1.22238598221448,0.589257170947335,0.569486723196412,0.372798891650601,0.37863096666592,0.755715601067855,1.15945795480671,0,0.679971333707751,0.539703191637817,0,0,1.96622188184453,0.340860645156116,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0.5709193985953,2.58937883647172,0.742210695324124,0.520455980298408,0.913396434936424,0.922461989024234,0.452167921657868,0.940709657085638,0.502666365318702,0.247194967734374,0.289198713839823,2.65383165584962,2.10296904931632,6.18356251689102,3.87900202508178,1.86391761218122,3.80615036115011,2.72280718857492,0.766371165625774,0.239630249011841,0,0.254140454146129,2.09706895166752,0.915001205637253,0.376963056338593,1.04294592115366,0.255715457330331,2.49345653471472,1.29793010454206,0.203678727700633,4.97627882440372,0.252722758433675,0.841767423545896,0.650602214813519,0.229902104433473,0.360124259610698,0.452114453507145,0.408218994907967,0.640568601424249,0.281105173679186,0.776110112217047,0.646703978798527,0.378212160335639,0.527853372491847,0.657587197282725,0.556094498451196,1.39300866608867,0.61734640922383,0,0,0,0,0,0.938104239924385,0,0.23674473558521,0.196764231747404,0.771335564436891,0.697601834251224,1.07309360559848,0.934122738937356,0.493679549740441,0.656669856316381,0.891756905004413,1.60819986167866,1.09775057645525,1.07365135008297,2.3131894342054,0.411618449517138,0.330418782983798,0.528901133327089,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0.570676878337677,0,0.494096864172033,0.251335208800269,0.596869416123452,0.779856348476481,0,0.648414149624083,0.398282546508734,0,0.342745537829186,0,0.407302655690628,0,0.280543279561274,1.01178459398812,0.885660887877613,0.627994911365499,0.370191491765402,0.296452627087149,0,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,1.01850340712568,1.43848068725405,2.91843408195064,0.823684239564244,0,0.744281895337007,0.312037673114561,0.505157755894224,0.896987067609561,0,2.40179147216586,0,0.162964976442026,0,0.469380496577004,0.837531287209079,1.42826184531608,0.975668239288994,1.10344600874334,1.32878813789265,1.75400245523236,1.47476983244164,2.76295970985433,1.44649058581512,0,0,0,0,2.40825884981688,1.52375192569864,0.163934945376675,0.757412781613119,0.315508219416257,0.780877488593277,1.07711698866399,0.955875191810208,0,0.849229592366497,0,1.16902343164525,1.58115111178609,0.642642632843614,0.709700426041343,0.35613120733451,0.488660878060728,0.659880491890142,0,0.971122544619926,0,0.565815239267694,0.590603785761546,0.922305443831782,0.258428293168221,1.09060118843252,0.712994756769443,0.632073515871632,1.05418608574999,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0.49465875882444,0.161464426695906,0.180938774784468,0.238744688006273,0.492422699235184,0.582961673259701,2.22510362412612,2.22132145037209,0.412773735926445,1.11116716421827,1.88368457004691,3.2806614653046,2.74533807847827,0.509935289981566,0.69975726161829,0.690999869022119,1.90934123603023,0.316335993581135,0.406638934253697,0,0.209088296014469,0.218362563746178,0.269728692769641,0.495920734352016,0,0.259229946583586,1.86401793926078,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.337912250981556,0.58678619322877,0.13020438484395,0.314578033277133,0.241584120826006,0.576060012515731,16.1165671520371,1.62180172232131,3.59488350076895,4.15746633528944,7.34009452236674,13.7090134799073,8.77426781495773,8.86137163047463,10.0966449948148,14.707913684415,12.3007945866945,13.1568138998666,13.8545051962074,22.6741190232244,0.226730383615211,0.221985953374065,0.269141569828427,0.167884616364078,1.15913756419314,0.563047426353546,0.36630324853453,0.643105137237198,0,0,0.920650473014354,0,0.171853182343688,0,0,0.675022500231806,1.35096360967266,0.4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|phase1_expression=0.480446541314382,1.04692622291808,1.81999695755814,0,0,0,0.233612640595526,5.93967287831251,3.37892933164,2.80877431586392,1.54096171402954,0.797721589953364,5.13602189793617,2.62261207256992,0.999329285446988,1.82227740650843,0.699561878128147,6.62470547252299,6.17014951225825,7.21462408056651,0.850432901510698,3.07801948722744,2.08959831311148,0.95995453676044,2.06468352960453,0.57423196411502,0.430761996159075,0,0.190023419456374,0,0.221730510655305,0,1.23012957516914,0,0.288851619751275,0,0.204169356262369,0,0.7813353445238,0,0.588231488031014,0,0,0,0.202753862439029,0,0.782391344348039,0.872100625521786,0.659058548203415,0.388859798148567,0.419959264876088,0,10.2347389695219,11.6057942721815,9.41062637598899,0,0.286533439938757,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0,0,0,0.599200221036809,1.15265491596466,0.103689612308478,0.135005938331691,0.420649922702764,0.856952953211411,0.662605622854841,0.244981598429908,0.383381884072945,0,0,0.766124028511126,0.46081959976873,1.05509030184155,0.182975287204819,0.52091337055676,0.279182999001381,1.12552522006336,1.22238598221448,0.589257170947335,0.569486723196412,0.372798891650601,0.37863096666592,0.755715601067855,1.15945795480671,0,0.679971333707751,0.539703191637817,0,0,1.96622188184453,0.340860645156116,0,0,0.563373679106722,0,0,0,0.216491041011214,0.253359865475099,1.01104889002957,0.5709193985953,2.58937883647172,0.742210695324124,0.520455980298408,0.913396434936424,0.922461989024234,0.452167921657868,0.940709657085638,0.502666365318702,0.247194967734374,0.289198713839823,2.65383165584962,2.10296904931632,6.18356251689102,3.87900202508178,1.86391761218122,3.80615036115011,2.72280718857492,0.766371165625774,0.239630249011841,0,0.254140454146129,2.09706895166752,0.915001205637253,0.376963056338593,1.04294592115366,0.255715457330331,2.49345653471472,1.29793010454206,0.203678727700633,4.97627882440372,0.252722758433675,0.841767423545896,0.650602214813519,0.229902104433473,0.360124259610698,0.452114453507145,0.408218994907967,0.640568601424249,0.281105173679186,0.776110112217047,0.646703978798527,0.378212160335639,0.527853372491847,0.657587197282725,0.556094498451196,1.39300866608867,0.61734640922383,0,0,0,0,0,0.938104239924385,0,0.23674473558521,0.196764231747404,0.771335564436891,0.697601834251224,1.07309360559848,0.934122738937356,0.493679549740441,0.656669856316381,0.891756905004413,1.60819986167866,1.09775057645525,1.07365135008297,2.3131894342054,0.411618449517138,0.330418782983798,0.528901133327089,0,0,0.515469845288373,0.201683524623343,0.22237804384487,0.570676878337677,0,0.494096864172033,0.251335208800269,0.596869416123452,0.779856348476481,0,0.648414149624083,0.398282546508734,0,0.342745537829186,0,0.407302655690628,0,0.280543279561274,1.01178459398812,0.885660887877613,0.627994911365499,0.370191491765402,0.296452627087149,0,0.196558995113203,0.224862112384854,0.202860121388503,0.482354319504834,1.01850340712568,1.43848068725405,2.91843408195064,0.823684239564244,0,0.744281895337007,0.312037673114561,0.505157755894224,0.896987067609561,0,2.40179147216586,0,0.162964976442026,0,0.469380496577004,0.837531287209079,1.42826184531608,0.975668239288994,1.10344600874334,1.32878813789265,1.75400245523236,1.47476983244164,2.76295970985433,1.44649058581512,0,0,0,0,2.40825884981688,1.52375192569864,0.163934945376675,0.757412781613119,0.315508219416257,0.780877488593277,1.07711698866399,0.955875191810208,0,0.849229592366497,0,1.16902343164525,1.58115111178609,0.642642632843614,0.709700426041343,0.35613120733451,0.488660878060728,0.659880491890142,0,0.971122544619926,0,0.565815239267694,0.590603785761546,0.922305443831782,0.258428293168221,1.09060118843252,0.712994756769443,0.632073515871632,1.05418608574999,0,0,0.540183282093931,0.388076051348264,0.214337035031592,0.177340233642274,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0.49465875882444,0.161464426695906,0.180938774784468,0.238744688006273,0.492422699235184,0.582961673259701,2.22510362412612,2.22132145037209,0.412773735926445,1.11116716421827,1.88368457004691,3.2806614653046,2.74533807847827,0.509935289981566,0.69975726161829,0.690999869022119,1.90934123603023,0.316335993581135,0.406638934253697,0,0.209088296014469,0.218362563746178,0.269728692769641,0.495920734352016,0,0.259229946583586,1.86401793926078,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0.337912250981556,0.58678619322877,0.13020438484395,0.314578033277133,0.241584120826006,0.576060012515731,16.1165671520371,1.62180172232131,3.59488350076895,4.15746633528944,7.34009452236674,13.7090134799073,8.77426781495773,8.86137163047463,10.0966449948148,14.707913684415,12.3007945866945,13.1568138998666,13.8545051962074,22.6741190232244,0.226730383615211,0.221985953374065,0.269141569828427,0.167884616364078,1.15913756419314,0.563047426353546,0.36630324853453,0.643105137237198,0,0,0.920650473014354,0,0.171853182343688,0,0,0.675022500231806,1.35096360967266,0.4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| ||
|short_description=p2@Neil1 | |short_description=p2@Neil1 | ||
}} | }} |
Revision as of 12:24, 14 November 2012
Short description: | p2@Neil1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Neil1_5end |
Coexpression cluster: | MCL_coexpression_mm9:4 |
Association with transcript: | -83bp_to_uc009pui.1, uc009puj.1_5end |
EntrezGene: | Neil1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 3.52e-10 | 12 |
lymphocyte | 3.96e-09 | 13 |
common lymphoid progenitor | 3.96e-09 | 13 |
T cell | 4.03e-09 | 11 |
pro-T cell | 4.03e-09 | 11 |
hematopoietic lineage restricted progenitor cell | 5.06e-09 | 25 |
mature alpha-beta T cell | 1.56e-07 | 9 |
alpha-beta T cell | 1.56e-07 | 9 |
immature T cell | 1.56e-07 | 9 |
mature T cell | 1.56e-07 | 9 |
immature alpha-beta T cell | 1.56e-07 | 9 |
leukocyte | 3.08e-07 | 17 |
nongranular leukocyte | 3.08e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 2.30e-18 | 29 |
immune organ | 2.30e-18 | 29 |
gland of gut | 2.53e-16 | 24 |
mixed endoderm/mesoderm-derived structure | 4.61e-16 | 35 |
thymus | 1.26e-15 | 23 |
neck | 1.26e-15 | 23 |
respiratory system epithelium | 1.26e-15 | 23 |
hemolymphoid system gland | 1.26e-15 | 23 |
pharyngeal epithelium | 1.26e-15 | 23 |
thymic region | 1.26e-15 | 23 |
pharyngeal gland | 1.26e-15 | 23 |
entire pharyngeal arch endoderm | 1.26e-15 | 23 |
thymus primordium | 1.26e-15 | 23 |
early pharyngeal endoderm | 1.26e-15 | 23 |
hemolymphoid system | 2.27e-15 | 48 |
immune system | 2.27e-15 | 48 |
respiratory system | 6.33e-15 | 42 |
pharynx | 1.12e-14 | 24 |
upper respiratory tract | 1.12e-14 | 24 |
chordate pharynx | 1.12e-14 | 24 |
pharyngeal arch system | 1.12e-14 | 24 |
pharyngeal region of foregut | 1.12e-14 | 24 |
hematopoietic system | 1.65e-14 | 45 |
blood island | 1.65e-14 | 45 |
respiratory tract | 2.86e-14 | 41 |
segment of respiratory tract | 2.48e-13 | 27 |
foregut | 1.24e-09 | 80 |
lateral plate mesoderm | 2.30e-09 | 87 |
craniocervical region | 1.57e-08 | 36 |
endo-epithelium | 5.18e-08 | 69 |
anterior region of body | 7.89e-07 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
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Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.