FFCP PHASE1:Mm9::chr7:20550824..20550835,+: Difference between revisions
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|id=chr7:20550824..20550835,+ | |id=chr7:20550824..20550835,+ | ||
|ontology_enrichment_celltype=CL:0002563!4.63e-12!9;CL:0002251!4.63e-12!9;CL:0000239!1.56e-11!6;CL:0000677!1.56e-11!6;CL:0000212!1.56e-11!6;CL:0000584!1.56e-11!6;CL:0000075!9.72e-10!7;CL:0000066!5.25e-08!25 | |ontology_enrichment_celltype=CL:0002563!4.63e-12!9;CL:0002251!4.63e-12!9;CL:0000239!1.56e-11!6;CL:0000677!1.56e-11!6;CL:0000212!1.56e-11!6;CL:0000584!1.56e-11!6;CL:0000075!9.72e-10!7;CL:0000066!5.25e-08!25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.54e-17,6;CL:0000677,1.54e-17,6;CL:0000584,1.54e-17,6;CL:0000075,6.12e-15,7;CL:0002563,1.81e-11,9;CL:0002251,1.81e-11,9;CL:0000682,1.80e-09,3;CL:0000066,4.11e-08,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.01e-29!43;UBERON:0000344!2.78e-22!15;UBERON:0005409!1.71e-20!59;UBERON:0001242!6.33e-19!13;UBERON:0000060!6.33e-19!13;UBERON:0001262!6.33e-19!13;UBERON:0004786!6.33e-19!13;UBERON:0004923!1.87e-12!24;UBERON:0003350!4.63e-12!9;UBERON:0004808!4.63e-12!9;UBERON:0001277!4.63e-12!9;UBERON:0000485!1.46e-09!11;UBERON:0001007!2.79e-09!128;UBERON:0001555!2.79e-09!128;UBERON:0007026!2.79e-09!128;UBERON:0004119!5.35e-09!130;UBERON:0000925!5.35e-09!130;UBERON:0006595!5.35e-09!130;UBERON:0004921!6.81e-08!126;UBERON:0004185!6.81e-08!126 | |ontology_enrichment_uberon=UBERON:0000160!5.01e-29!43;UBERON:0000344!2.78e-22!15;UBERON:0005409!1.71e-20!59;UBERON:0001242!6.33e-19!13;UBERON:0000060!6.33e-19!13;UBERON:0001262!6.33e-19!13;UBERON:0004786!6.33e-19!13;UBERON:0004923!1.87e-12!24;UBERON:0003350!4.63e-12!9;UBERON:0004808!4.63e-12!9;UBERON:0001277!4.63e-12!9;UBERON:0000485!1.46e-09!11;UBERON:0001007!2.79e-09!128;UBERON:0001555!2.79e-09!128;UBERON:0007026!2.79e-09!128;UBERON:0004119!5.35e-09!130;UBERON:0000925!5.35e-09!130;UBERON:0006595!5.35e-09!130;UBERON:0004921!6.81e-08!126;UBERON:0004185!6.81e-08!126 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.14e-37,31;UBERON:0000344,8.42e-27,15;UBERON:0005409,2.03e-25,47;UBERON:0001242,1.20e-21,13;UBERON:0001262,1.20e-21,13;UBERON:0004786,1.20e-21,13;UBERON:0004923,8.68e-16,24;UBERON:0002108,3.62e-12,4;UBERON:0003350,1.81e-11,9;UBERON:0004808,1.81e-11,9;UBERON:0001277,1.81e-11,9;UBERON:0000331,9.31e-10,3;UBERON:0002116,9.31e-10,3;UBERON:0001204,9.31e-10,3;UBERON:0001168,9.31e-10,3;UBERON:0001007,1.66e-09,116;UBERON:0001555,1.66e-09,116;UBERON:0007026,1.66e-09,116;UBERON:0004119,2.93e-09,118;UBERON:0000925,2.93e-09,118;UBERON:0006595,2.93e-09,118;UBERON:0000485,2.94e-09,11;UBERON:0004921,1.08e-07,114;UBERON:0001962,6.61e-07,2;UBERON:0001961,6.61e-07,2;UBERON:0001744,6.61e-07,2;UBERON:0001155,8.62e-07,2;UBERON:0000059,8.62e-07,2 | |||
|phase1_expression=0,16.40184415905,15.9249733786338,30.5488853419898,27.0483694171027,1.6787927191189,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,11.4704640533585,7.46501553349526,9.04600191934057,10.5580904016086,24.7030445293286,9.07308467135751,9.5344119581781,0,0,0,0.288851619751275,0,0.408338712524738,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,3.72783522436244,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.3460661282178,5.28901133327089,0,0,0,0,0,0.190225626112559,6.64340686162316,0.988193728344065,2.01068167040216,2.38747766449381,2.14460495831032,6.29173586057955,10.3746263939853,11.1519113022446,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96705709207614,1.10374698521893,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0.948110273807448,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03691978633434,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,16.40184415905,15.9249733786338,30.5488853419898,27.0483694171027,1.6787927191189,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.71968175732308,11.4704640533585,7.46501553349526,9.04600191934057,10.5580904016086,24.7030445293286,9.07308467135751,9.5344119581781,0,0,0,0.288851619751275,0,0.408338712524738,0.418531630736908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.82694207550496,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,3.72783522436244,0,0,12.7728527604296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.3460661282178,5.28901133327089,0,0,0,0,0,0.190225626112559,6.64340686162316,0.988193728344065,2.01068167040216,2.38747766449381,2.14460495831032,6.29173586057955,10.3746263939853,11.1519113022446,0,0,0,0,0,0,0,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96705709207614,1.10374698521893,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0.948110273807448,2.10837217149998,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03691978633434,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0.192423683280659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0574354689556133,0,0.115884325944855,0,0,0,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0.561142271657738,0.118635018124174,0,0,0,0,0,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p2@Ceacam20 | |short_description=p2@Ceacam20 | ||
}} | }} |
Revision as of 21:18, 13 November 2012
Short description: | p2@Ceacam20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ceacam20_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 63bp_to_ENSMUST00000094753, NM_027839, uc012fbl.1_5end |
EntrezGene: | Ceacam20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.54e-17 | 6 |
gut absorptive cell | 1.54e-17 | 6 |
enterocyte | 1.54e-17 | 6 |
columnar/cuboidal epithelial cell | 6.12e-15 | 7 |
intestinal epithelial cell | 1.81e-11 | 9 |
epithelial cell of alimentary canal | 1.81e-11 | 9 |
M cell of gut | 1.80e-09 | 3 |
epithelial cell | 4.11e-08 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.14e-37 | 31 |
mucosa | 8.42e-27 | 15 |
gastrointestinal system | 2.03e-25 | 47 |
intestinal mucosa | 1.20e-21 | 13 |
wall of intestine | 1.20e-21 | 13 |
gastrointestinal system mucosa | 1.20e-21 | 13 |
organ component layer | 8.68e-16 | 24 |
small intestine | 3.62e-12 | 4 |
epithelium of mucosa | 1.81e-11 | 9 |
gastrointestinal system epithelium | 1.81e-11 | 9 |
intestinal epithelium | 1.81e-11 | 9 |
ileal mucosa | 9.31e-10 | 3 |
ileum | 9.31e-10 | 3 |
mucosa of small intestine | 9.31e-10 | 3 |
wall of small intestine | 9.31e-10 | 3 |
digestive system | 1.66e-09 | 116 |
digestive tract | 1.66e-09 | 116 |
primitive gut | 1.66e-09 | 116 |
endoderm-derived structure | 2.93e-09 | 118 |
endoderm | 2.93e-09 | 118 |
presumptive endoderm | 2.93e-09 | 118 |
simple columnar epithelium | 2.94e-09 | 11 |
subdivision of digestive tract | 1.08e-07 | 114 |
gut-associated lymphoid tissue | 6.61e-07 | 2 |
mucosa-associated lymphoid tissue | 6.61e-07 | 2 |
lymphoid tissue | 6.61e-07 | 2 |
colon | 8.62e-07 | 2 |
large intestine | 8.62e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.