FFCP PHASE1:Mm9::chr1:13658880..13658893,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr1:13658880..13658893,+ | |id=chr1:13658880..13658893,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.25e-07!6;CL:0000677!1.25e-07!6;CL:0000212!1.25e-07!6;CL:0000584!1.25e-07!6 | |ontology_enrichment_celltype=CL:0000239!1.25e-07!6;CL:0000677!1.25e-07!6;CL:0000212!1.25e-07!6;CL:0000584!1.25e-07!6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,7.74e-13,6;CL:0000677,7.74e-13,6;CL:0000584,7.74e-13,6;CL:0000066,2.48e-12,25;CL:0000075,6.88e-11,7;CL:0000223,2.30e-09,20;CL:0002563,2.73e-08,9;CL:0002251,2.73e-08,9;CL:0000182,1.03e-07,5;CL:0000682,3.30e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!5.09e-16!43;UBERON:0005409!1.93e-13!59;UBERON:0001007!7.31e-12!128;UBERON:0001555!7.31e-12!128;UBERON:0007026!7.31e-12!128;UBERON:0004119!1.99e-11!130;UBERON:0000925!1.99e-11!130;UBERON:0006595!1.99e-11!130;UBERON:0004921!1.12e-10!126;UBERON:0004185!1.12e-10!126;UBERON:0000344!2.17e-10!15;UBERON:0001242!1.39e-08!13;UBERON:0000060!1.39e-08!13;UBERON:0001262!1.39e-08!13;UBERON:0004786!1.39e-08!13 | |ontology_enrichment_uberon=UBERON:0000160!5.09e-16!43;UBERON:0005409!1.93e-13!59;UBERON:0001007!7.31e-12!128;UBERON:0001555!7.31e-12!128;UBERON:0007026!7.31e-12!128;UBERON:0004119!1.99e-11!130;UBERON:0000925!1.99e-11!130;UBERON:0006595!1.99e-11!130;UBERON:0004921!1.12e-10!126;UBERON:0004185!1.12e-10!126;UBERON:0000344!2.17e-10!15;UBERON:0001242!1.39e-08!13;UBERON:0000060!1.39e-08!13;UBERON:0001262!1.39e-08!13;UBERON:0004786!1.39e-08!13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.00e-35,31;UBERON:0005409,6.16e-23,47;UBERON:0000344,3.29e-19,15;UBERON:0001007,2.00e-17,116;UBERON:0001555,2.00e-17,116;UBERON:0007026,2.00e-17,116;UBERON:0004119,5.49e-17,118;UBERON:0000925,5.49e-17,118;UBERON:0006595,5.49e-17,118;UBERON:0001242,8.34e-16,13;UBERON:0001262,8.34e-16,13;UBERON:0004786,8.34e-16,13;UBERON:0004921,2.20e-15,114;UBERON:0004923,6.26e-11,24;UBERON:0002108,1.24e-09,4;UBERON:0003350,2.73e-08,9;UBERON:0004808,2.73e-08,9;UBERON:0001277,2.73e-08,9;UBERON:0000331,9.12e-08,3;UBERON:0002116,9.12e-08,3;UBERON:0001204,9.12e-08,3;UBERON:0001168,9.12e-08,3;UBERON:0002107,1.28e-07,22;UBERON:0007499,1.28e-07,22;UBERON:0006925,1.28e-07,22;UBERON:0009497,1.28e-07,22;UBERON:0000015,1.28e-07,22;UBERON:0002423,1.28e-07,22;UBERON:0006235,1.28e-07,22;UBERON:0008835,1.28e-07,22;UBERON:0003894,1.28e-07,22;UBERON:0004161,1.28e-07,22;UBERON:0008836,1.28e-07,22;UBERON:0009854,3.35e-07,23;UBERON:0009856,3.35e-07,23 | |||
|phase1_expression=0,5.58360652222978,9.09998478779072,11.1911758183527,8.5152274090879,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31979541542198,2.98232065387321,6.31655160526522,3.01533397311352,5.817723282519,7.60093677825496,9.32511480111744,5.09980174507201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,11.5595126730318,5.93673510801599,7.14754059192436,4.03224198387602,2.24711072210803,0,0,0,0,0,0,0,0,0,0,2.62622923353838,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58214470653014,2.64450566663544,0,0,0.902072229254653,3.22693639397348,3.55804870151792,6.65789691393957,4.74529061544512,7.08205505313247,6.53471542880701,3.78017296878187,3.8992817423824,1.79763881730844,3.02593269824572,2.78797782556114,0,0,0,0,0,0.210407459670956,0,0,0,0,4.74324203339438,0,0,0,0,0,0.763877555344259,0,0.162135226775035,0,0,1.86070473834252,0.312037673114561,1.51547326768267,5.74071723270119,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377210159511796,0,0.614870295887855,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.655087691238533,0,0.826534557253359,1.57053565190418,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0.221985953374065,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,1.03017528619447,0,0.252697211763798,1.2673964994512,0.377252682772152,0.561849044819294,0.448176066834085,0.516919220600519,0.476293691283074,0.463537303779422,0.578727661391115,0.824171801606613,0.588795680537589,0.342869252385415,0.532427418478012,0.953744759789284,0.290692833264657,0.658765662907314,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.929621047115796,0,0,0.467863216890817,0.859484216193193,0,0,0 | |phase1_expression=0,5.58360652222978,9.09998478779072,11.1911758183527,8.5152274090879,1.17515490338323,1.86890112476421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.31979541542198,2.98232065387321,6.31655160526522,3.01533397311352,5.817723282519,7.60093677825496,9.32511480111744,5.09980174507201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,11.5595126730318,5.93673510801599,7.14754059192436,4.03224198387602,2.24711072210803,0,0,0,0,0,0,0,0,0,0,2.62622923353838,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,0,0,0,2.81002760729451,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58214470653014,2.64450566663544,0,0,0.902072229254653,3.22693639397348,3.55804870151792,6.65789691393957,4.74529061544512,7.08205505313247,6.53471542880701,3.78017296878187,3.8992817423824,1.79763881730844,3.02593269824572,2.78797782556114,0,0,0,0,0,0.210407459670956,0,0,0,0,4.74324203339438,0,0,0,0,0,0.763877555344259,0,0.162135226775035,0,0,1.86070473834252,0.312037673114561,1.51547326768267,5.74071723270119,1.4473305640901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377210159511796,0,0.614870295887855,0.516856586336442,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0.655087691238533,0,0.826534557253359,1.57053565190418,0.388844919875379,0.621339313086926,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0.0762068066549998,0,0,0.0962118416403295,0,0,0.221985953374065,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.666740183404846,1.03017528619447,0,0.252697211763798,1.2673964994512,0.377252682772152,0.561849044819294,0.448176066834085,0.516919220600519,0.476293691283074,0.463537303779422,0.578727661391115,0.824171801606613,0.588795680537589,0.342869252385415,0.532427418478012,0.953744759789284,0.290692833264657,0.658765662907314,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.355905054372522,0.394017929502254,0.409231043169689,0.929621047115796,0,0,0.467863216890817,0.859484216193193,0,0,0 | ||
|short_description=p3@Xkr9 | |short_description=p3@Xkr9 | ||
}} | }} |
Revision as of 14:01, 14 November 2012
Short description: | p3@Xkr9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Xkr9_5end |
Coexpression cluster: | MCL_coexpression_mm9:166 |
Association with transcript: | 28bp_to_ENSMUST00000088542, NM_001011873, uc007aiv.1_5end |
EntrezGene: | Xkr9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 7.74e-13 | 6 |
gut absorptive cell | 7.74e-13 | 6 |
enterocyte | 7.74e-13 | 6 |
epithelial cell | 2.48e-12 | 25 |
columnar/cuboidal epithelial cell | 6.88e-11 | 7 |
endodermal cell | 2.30e-09 | 20 |
intestinal epithelial cell | 2.73e-08 | 9 |
epithelial cell of alimentary canal | 2.73e-08 | 9 |
hepatocyte | 1.03e-07 | 5 |
M cell of gut | 3.30e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.