FFCP PHASE1:Hg19::chr5:78365437..78365489,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000181!1.48e-07!12;CL:0000417!1.48e-07!12;CL:0000668!1.48e-07!12;CL:0000414!1.48e-07!12;CL:0000412!1.48e-07!12;CL:0000182!1.48e-07!12;CL:0000136!6.65e-07!15 | |ontology_enrichment_celltype=CL:0000181!1.48e-07!12;CL:0000417!1.48e-07!12;CL:0000668!1.48e-07!12;CL:0000414!1.48e-07!12;CL:0000412!1.48e-07!12;CL:0000182!1.48e-07!12;CL:0000136!6.65e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0000182;7.05e-13;12!CL:0000136;9.81e-07;13 | |ontology_enrichment_celltype_v019=CL:0000182;7.05e-13;12!CL:0000136;9.81e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.00e-13,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;9.44e-14;11!UBERON:0003104;1.73e-12;31!UBERON:0009497;2.59e-11;13 | |ontology_enrichment_development_v019=UBERON:0004161;9.44e-14;11!UBERON:0003104;1.73e-12;31!UBERON:0009497;2.59e-11;13 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.19e-39!115;UBERON:0000475!2.27e-19!365;UBERON:0001049!5.59e-19!57;UBERON:0005068!5.59e-19!57;UBERON:0006241!5.59e-19!57;UBERON:0007135!5.59e-19!57;UBERON:0003075!1.16e-18!86;UBERON:0007284!1.16e-18!86;UBERON:0002346!6.67e-17!90;UBERON:0002616!1.60e-15!59;UBERON:0005743!1.69e-14!86;UBERON:0003080!2.86e-14!42;UBERON:0000153!9.01e-14!129;UBERON:0007811!9.01e-14!129;UBERON:0002780!1.41e-13!41;UBERON:0001890!1.41e-13!41;UBERON:0006240!1.41e-13!41;UBERON:0003056!1.41e-13!61;UBERON:0000033!4.32e-13!123;UBERON:0000073!4.34e-13!94;UBERON:0001016!4.34e-13!94;UBERON:0000481!4.43e-13!347;UBERON:0000955!5.99e-13!69;UBERON:0006238!5.99e-13!69;UBERON:0001017!8.07e-13!82;UBERON:0000477!3.49e-12!286;UBERON:0000483!3.80e-12!309;UBERON:0000119!1.12e-11!312;UBERON:0004111!2.00e-11!241;UBERON:0002020!2.16e-11!34;UBERON:0003528!2.16e-11!34;UBERON:0001893!4.89e-11!34;UBERON:0000025!1.09e-10!194;UBERON:0000062!1.09e-10!511;UBERON:0002791!1.17e-10!33;UBERON:0004121!1.64e-10!169;UBERON:0001869!3.15e-10!32;UBERON:0000468!4.37e-10!659;UBERON:0000924!9.62e-10!173;UBERON:0006601!9.62e-10!173;UBERON:0000467!1.02e-08!625;UBERON:0000480!1.30e-08!626;UBERON:0000479!1.72e-07!787;UBERON:0000064!2.00e-07!219;UBERON:0002308!7.26e-07!9;UBERON:0000125!7.26e-07!9;UBERON:0002368!7.72e-07!35;UBERON:0002619!9.08e-07!22;UBERON:0002107!9.67e-07!19;UBERON:0006925!9.67e-07!19;UBERON:0008836!9.67e-07!19 | |ontology_enrichment_uberon=UBERON:0007023!5.19e-39!115;UBERON:0000475!2.27e-19!365;UBERON:0001049!5.59e-19!57;UBERON:0005068!5.59e-19!57;UBERON:0006241!5.59e-19!57;UBERON:0007135!5.59e-19!57;UBERON:0003075!1.16e-18!86;UBERON:0007284!1.16e-18!86;UBERON:0002346!6.67e-17!90;UBERON:0002616!1.60e-15!59;UBERON:0005743!1.69e-14!86;UBERON:0003080!2.86e-14!42;UBERON:0000153!9.01e-14!129;UBERON:0007811!9.01e-14!129;UBERON:0002780!1.41e-13!41;UBERON:0001890!1.41e-13!41;UBERON:0006240!1.41e-13!41;UBERON:0003056!1.41e-13!61;UBERON:0000033!4.32e-13!123;UBERON:0000073!4.34e-13!94;UBERON:0001016!4.34e-13!94;UBERON:0000481!4.43e-13!347;UBERON:0000955!5.99e-13!69;UBERON:0006238!5.99e-13!69;UBERON:0001017!8.07e-13!82;UBERON:0000477!3.49e-12!286;UBERON:0000483!3.80e-12!309;UBERON:0000119!1.12e-11!312;UBERON:0004111!2.00e-11!241;UBERON:0002020!2.16e-11!34;UBERON:0003528!2.16e-11!34;UBERON:0001893!4.89e-11!34;UBERON:0000025!1.09e-10!194;UBERON:0000062!1.09e-10!511;UBERON:0002791!1.17e-10!33;UBERON:0004121!1.64e-10!169;UBERON:0001869!3.15e-10!32;UBERON:0000468!4.37e-10!659;UBERON:0000924!9.62e-10!173;UBERON:0006601!9.62e-10!173;UBERON:0000467!1.02e-08!625;UBERON:0000480!1.30e-08!626;UBERON:0000479!1.72e-07!787;UBERON:0000064!2.00e-07!219;UBERON:0002308!7.26e-07!9;UBERON:0000125!7.26e-07!9;UBERON:0002368!7.72e-07!35;UBERON:0002619!9.08e-07!22;UBERON:0002107!9.67e-07!19;UBERON:0006925!9.67e-07!19;UBERON:0008836!9.67e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0002368;2.55e-12;33!UBERON:0002107;1.89e-11;19!UBERON:0006925;1.89e-11;19!UBERON:0002423;1.72e-09;25!UBERON:0003296;5.08e-08;4!UBERON:0010133;5.08e-08;4!UBERON:0007023;1.07e-07;114!UBERON:0002298;2.28e-07;6!UBERON:0002365;5.04e-07;31!UBERON:0002330;5.04e-07;31 | |ontology_enrichment_uberon_v019=UBERON:0002368;2.55e-12;33!UBERON:0002107;1.89e-11;19!UBERON:0006925;1.89e-11;19!UBERON:0002423;1.72e-09;25!UBERON:0003296;5.08e-08;4!UBERON:0010133;5.08e-08;4!UBERON:0007023;1.07e-07;114!UBERON:0002298;2.28e-07;6!UBERON:0002365;5.04e-07;31!UBERON:0002330;5.04e-07;31 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.87e-29,114;UBERON:0002368,8.12e-13,35;UBERON:0002107,2.09e-11,19;UBERON:0006925,2.09e-11,19;UBERON:0008836,2.09e-11,19;UBERON:0009854,1.85e-10,23;UBERON:0008835,1.82e-09,22;UBERON:0003894,1.82e-09,22;UBERON:0009497,2.01e-09,25;UBERON:0000015,2.01e-09,25;UBERON:0002423,2.01e-09,25;UBERON:0006235,2.01e-09,25;UBERON:0004161,2.01e-09,25;UBERON:0000949,6.23e-09,45;UBERON:0009856,6.71e-09,26;UBERON:0003296,3.89e-08,4;UBERON:0010133,3.89e-08,4;UBERON:0007499,5.31e-08,25;UBERON:0002298,7.59e-08,6;UBERON:0002530,1.84e-07,59;UBERON:0002417,1.86e-07,60;UBERON:0000916,1.86e-07,60;UBERON:0002365,4.73e-07,31;UBERON:0002330,4.73e-07,31;UBERON:0005172,5.62e-07,54;UBERON:0005173,5.62e-07,54 | |||
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| ||
|short_description=p2@DMGDH | |short_description=p2@DMGDH | ||
}} | }} |
Revision as of 22:02, 17 November 2012
Short description: | p2@DMGDH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_DMGDH_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000255189, ENST00000380311, ENST00000517853, ENST00000518477, ENST00000524206, ENST00000539598, ENST00000540686, NM_013391, uc003kfs.2, uc011ctf.1, uc011ctg.1_5end |
EntrezGene: | DMGDH |
HGNC: | 24475 |
UniProt: | Q9UI17F8W6P8E5RK15E5RG50E5RGI4F5H1C7B4E1J9B3KQ84 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.00e-13 | 12 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.87e-29 | 114 |
endocrine gland | 8.12e-13 | 35 |
liver | 2.09e-11 | 19 |
digestive gland | 2.09e-11 | 19 |
liver bud | 2.09e-11 | 19 |
digestive tract diverticulum | 1.85e-10 | 23 |
hepatic diverticulum | 1.82e-09 | 22 |
liver primordium | 1.82e-09 | 22 |
epithelium of foregut-midgut junction | 2.01e-09 | 25 |
anatomical boundary | 2.01e-09 | 25 |
hepatobiliary system | 2.01e-09 | 25 |
foregut-midgut junction | 2.01e-09 | 25 |
septum transversum | 2.01e-09 | 25 |
endocrine system | 6.23e-09 | 45 |
sac | 6.71e-09 | 26 |
gland of diencephalon | 3.89e-08 | 4 |
neuroendocrine gland | 3.89e-08 | 4 |
epithelial sac | 5.31e-08 | 25 |
brainstem | 7.59e-08 | 6 |
gland | 1.84e-07 | 59 |
abdominal segment of trunk | 1.86e-07 | 60 |
abdomen | 1.86e-07 | 60 |
exocrine gland | 4.73e-07 | 31 |
exocrine system | 4.73e-07 | 31 |
abdomen element | 5.62e-07 | 54 |
abdominal segment element | 5.62e-07 | 54 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.