FFCP PHASE1:Hg19::chr18:21481125..21481150,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.14e-23!254;CL:0002076!7.37e-17!43;CL:0002159!1.49e-13!13;CL:0000223!4.49e-12!59;CL:0002251!3.49e-08!21;CL:0000362!4.69e-07!8;CL:0002368!5.03e-07!13;CL:0000240!7.42e-07!6;CL:0000311!7.42e-07!6;CL:0000079!7.42e-07!6;CL:0000237!7.42e-07!6;CL:0000036!7.42e-07!6;CL:0000357!7.42e-07!6;CL:0000114!7.42e-07!6 | |ontology_enrichment_celltype=CL:0000066!1.14e-23!254;CL:0002076!7.37e-17!43;CL:0002159!1.49e-13!13;CL:0000223!4.49e-12!59;CL:0002251!3.49e-08!21;CL:0000362!4.69e-07!8;CL:0002368!5.03e-07!13;CL:0000240!7.42e-07!6;CL:0000311!7.42e-07!6;CL:0000079!7.42e-07!6;CL:0000237!7.42e-07!6;CL:0000036!7.42e-07!6;CL:0000357!7.42e-07!6;CL:0000114!7.42e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002159;1.24e-22;14!CL:0002076;1.59e-18;42!CL:0002621;7.84e-17;3!CL:0002166;1.11e-16;3!CL:0002541;1.37e-16;3!CL:0000349;2.42e-16;19!CL:0000362;3.91e-14;9!CL:0000240;5.02e-14;6!CL:0000311;5.02e-14;6!CL:0000079;5.02e-14;6!CL:0000237;5.02e-14;6!CL:0002327;2.11e-12;4!CL:0000317;3.04e-11;2!CL:1000448;3.04e-11;2!CL:0002308;3.04e-11;2!CL:0002140;3.04e-11;2!CL:0000312;7.28e-10;5!CL:0002077;1.07e-09;34!CL:0000622;1.13e-09;5!CL:0002251;7.28e-09;20!CL:0002231;3.08e-08;3!CL:0000154;3.89e-08;6!CL:0002577;1.25e-07;3 | |ontology_enrichment_celltype_v019=CL:0002159;1.24e-22;14!CL:0002076;1.59e-18;42!CL:0002621;7.84e-17;3!CL:0002166;1.11e-16;3!CL:0002541;1.37e-16;3!CL:0000349;2.42e-16;19!CL:0000362;3.91e-14;9!CL:0000240;5.02e-14;6!CL:0000311;5.02e-14;6!CL:0000079;5.02e-14;6!CL:0000237;5.02e-14;6!CL:0002327;2.11e-12;4!CL:0000317;3.04e-11;2!CL:1000448;3.04e-11;2!CL:0002308;3.04e-11;2!CL:0002140;3.04e-11;2!CL:0000312;7.28e-10;5!CL:0002077;1.07e-09;34!CL:0000622;1.13e-09;5!CL:0002251;7.28e-09;20!CL:0002231;3.08e-08;3!CL:0000154;3.89e-08;6!CL:0002577;1.25e-07;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002159,1.57e-22,14;CL:0002076,1.82e-21,42;CL:0002621,6.17e-17,3;CL:0002166,9.44e-17,3;CL:0002541,1.44e-16,3;CL:0000349,2.30e-16,19;CL:0000223,1.03e-14,58;CL:0000066,1.74e-14,253;CL:0000362,5.31e-14,9;CL:0000240,6.70e-14,6;CL:0000311,6.70e-14,6;CL:0000079,6.70e-14,6;CL:0000237,6.70e-14,6;CL:0000036,6.70e-14,6;CL:0000357,6.70e-14,6;CL:0000114,6.70e-14,6;CL:0002327,2.11e-12,4;CL:0000317,3.65e-11,2;CL:1000448,3.65e-11,2;CL:0002308,3.65e-11,2;CL:0002140,3.65e-11,2;CL:0002077,9.58e-11,34;CL:0000312,9.15e-10,5;CL:0000622,1.28e-09,5;CL:0002251,7.02e-09,20;CL:0002231,3.31e-08,3;CL:0000154,4.29e-08,6;CL:0002577,1.23e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;5.02e-14;6!CL:0000114;5.02e-14;6!CL:0000223;1.68e-07;58 | |ontology_enrichment_development_v019=CL:0000357;5.02e-14;6!CL:0000114;5.02e-14;6!CL:0000223;1.68e-07;58 | ||
|ontology_enrichment_disease=DOID:305!1.21e-11!106;DOID:1749!3.99e-09!14;DOID:0050687!1.25e-08!143;DOID:299!6.89e-07!25 | |ontology_enrichment_disease=DOID:305!1.21e-11!106;DOID:1749!3.99e-09!14;DOID:0050687!1.25e-08!143;DOID:299!6.89e-07!25 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!4.32e-15!14;UBERON:0000158!4.32e-15!14;UBERON:0004119!8.47e-10!169;UBERON:0000925!8.47e-10!169;UBERON:0006595!8.47e-10!169;UBERON:0003124!1.03e-08!7;UBERON:0000305!5.19e-08!7;UBERON:0004923!7.80e-08!57;UBERON:0003100!1.84e-07!41;UBERON:0000478!2.24e-07!24;UBERON:0004175!2.27e-07!25;UBERON:0005156!2.78e-07!59;UBERON:0000990!2.78e-07!59;UBERON:0004871!7.08e-07!8 | |ontology_enrichment_uberon=UBERON:0005631!4.32e-15!14;UBERON:0000158!4.32e-15!14;UBERON:0004119!8.47e-10!169;UBERON:0000925!8.47e-10!169;UBERON:0006595!8.47e-10!169;UBERON:0003124!1.03e-08!7;UBERON:0000305!5.19e-08!7;UBERON:0004923!7.80e-08!57;UBERON:0003100!1.84e-07!41;UBERON:0000478!2.24e-07!24;UBERON:0004175!2.27e-07!25;UBERON:0005156!2.78e-07!59;UBERON:0000990!2.78e-07!59;UBERON:0004871!7.08e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.67e-18;10!UBERON:0000158;1.67e-18;10!UBERON:0001949;7.84e-17;3!UBERON:0003124;1.37e-16;3!UBERON:0000920;1.37e-16;3!UBERON:0000478;1.11e-12;24!UBERON:0001708;1.22e-12;4!UBERON:0008895;1.22e-12;4!UBERON:0001911;2.11e-12;4!UBERON:0002419;3.04e-11;2!UBERON:0007771;3.04e-11;2!UBERON:0003297;3.04e-11;2!UBERON:0001821;3.04e-11;2!UBERON:0003487;3.04e-11;2!UBERON:0001820;3.04e-11;2!UBERON:0011159;3.32e-10;5!UBERON:0003729;5.38e-10;13!UBERON:0010371;1.75e-09;31!UBERON:0001003;2.20e-08;15!UBERON:0007376;2.20e-08;15!UBERON:0003929;1.80e-07;7!UBERON:0000486;2.53e-07;12!UBERON:0000305;2.75e-07;7!UBERON:0004923;9.79e-07;55 | |ontology_enrichment_uberon_v019=UBERON:0005631;1.67e-18;10!UBERON:0000158;1.67e-18;10!UBERON:0001949;7.84e-17;3!UBERON:0003124;1.37e-16;3!UBERON:0000920;1.37e-16;3!UBERON:0000478;1.11e-12;24!UBERON:0001708;1.22e-12;4!UBERON:0008895;1.22e-12;4!UBERON:0001911;2.11e-12;4!UBERON:0002419;3.04e-11;2!UBERON:0007771;3.04e-11;2!UBERON:0003297;3.04e-11;2!UBERON:0001821;3.04e-11;2!UBERON:0003487;3.04e-11;2!UBERON:0001820;3.04e-11;2!UBERON:0011159;3.32e-10;5!UBERON:0003729;5.38e-10;13!UBERON:0010371;1.75e-09;31!UBERON:0001003;2.20e-08;15!UBERON:0007376;2.20e-08;15!UBERON:0003929;1.80e-07;7!UBERON:0000486;2.53e-07;12!UBERON:0000305;2.75e-07;7!UBERON:0004923;9.79e-07;55 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.21e-22,14;UBERON:0000158,1.21e-22,14;UBERON:0003124,2.11e-18,7;UBERON:0001949,6.17e-17,3;UBERON:0000920,1.44e-16,3;UBERON:0000478,1.07e-12,24;UBERON:0001708,1.08e-12,4;UBERON:0008895,1.08e-12,4;UBERON:0001911,2.11e-12,4;UBERON:0005333,2.11e-12,4;UBERON:0008425,2.11e-12,4;UBERON:0005311,2.11e-12,4;UBERON:0002419,3.65e-11,2;UBERON:0007771,3.65e-11,2;UBERON:0003297,3.65e-11,2;UBERON:0001821,3.65e-11,2;UBERON:0003487,3.65e-11,2;UBERON:0001820,3.65e-11,2;UBERON:0005089,3.65e-11,2;UBERON:0005088,3.65e-11,2;UBERON:0004923,1.10e-10,66;UBERON:0011159,3.02e-10,5;UBERON:0003729,5.09e-10,13;UBERON:0003102,5.51e-10,99;UBERON:0010188,1.31e-08,6;UBERON:0002539,1.31e-08,6;UBERON:0008816,1.31e-08,6;UBERON:0001003,2.62e-08,15;UBERON:0007376,2.62e-08,15;UBERON:0007383,2.62e-08,15;UBERON:0000305,2.58e-07,7 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,1.96597234917155,0.791300934685361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.323292113637624,0,0,0,8.69673839234836,6.54590689418003,6.59650569394709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,6.03626569747441,1.1240175325762,5.83068039987459,5.55530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,33.0924792551753,8.64828093178557,7.52291590703926,4.35950907770943,3.83382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,1.81876542867756,3.32870879020994,0.907170879989041,0,0,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,0,17.2435564460825,6.07734526976916,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0.509752546090077,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,1.14853107599234,6.50060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,9.0906703448538,8.45636296406467,2.80747967488085,4.046311234222,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.769776901804097,0,0,0,0.43050537267123,0,0.443430153536676,6.66197860600182,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.44610108791763,0.296964680832639,8.29333895667927,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0,0,0.311039587661807,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0.910347586283997,0.508507300585533,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0.153900517007594,0,0,0,0,7.97502899329799,1.37396390102793,24.5195996968572,0,0,0,0,0,0,0,0,1.89898258075224,0.326465616318295,0.141353071433941,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0,0,0.103688191397247,0,0,0,0,0,0,1.90915712168644,0.587954384486266,0.0870592065804026,0,0,0.0967563312890851,0,0,0.193978032976839,0,0,0,0,0.0633107959558787,0.195551382734803,0.0801588202515337,0,0,0.576361668616424,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,1.05154941711726,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.959575986597226,0,0,0,0.542999601753713,0.864221491201268,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0.530067437837643,0,0,0,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0.368211900503681,0.979156554036111,1.24415452006595,0,0,0.157265941855896,0.109209638192014,0,0,0,0,0,0.94634094001504,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,2.38457178078183,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0.295712172434091,0,0,0,0,0,0,0.496211178389294,0,0.511049710558381,0,0,0,0,0,0,0,0,0,0.709163045303809,0.556157009460346,0.156986185701028,0,0,0,0,0.9555033757741,0,0,0,0,0,1.45051314914126,0.51215543128185,0,0,0.118332000730565,0.255640214277473,0.423387050190929,3.89481676524885,0.62041277132864,0,0.223710863595585,0.196300467230486,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0,0,0,0,5.99921281916676,0.641930933513346,0,0,0.143339583151451,0,0.0679914901909147,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0.244209805832924,0.106727345877715,0,0,0,0,0,0,0,0 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| ||
|short_description=p@chr18:21481125..21481150,+ | |short_description=p@chr18:21481125..21481150,+ | ||
}} | }} |
Revision as of 13:32, 17 November 2012
Short description: | p@chr18:21481125..21481150, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:21481125..21481150, + |
Coexpression cluster: | C363_Mallassezderived_Gingival_Keratinocyte_Mammary_Prostate_Small_Urothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 1.57e-22 | 14 |
endo-epithelial cell | 1.82e-21 | 42 |
gingival epithelial cell | 6.17e-17 | 3 |
epithelial cell of Malassez | 9.44e-17 | 3 |
chorionic membrane mesenchymal stem cell | 1.44e-16 | 3 |
extraembryonic cell | 2.30e-16 | 19 |
endodermal cell | 1.03e-14 | 58 |
epithelial cell | 1.74e-14 | 253 |
epidermal cell | 5.31e-14 | 9 |
stratified squamous epithelial cell | 6.70e-14 | 6 |
keratin accumulating cell | 6.70e-14 | 6 |
stratified epithelial cell | 6.70e-14 | 6 |
keratinizing barrier epithelial cell | 6.70e-14 | 6 |
epithelial fate stem cell | 6.70e-14 | 6 |
stratified epithelial stem cell | 6.70e-14 | 6 |
surface ectodermal cell | 6.70e-14 | 6 |
mammary gland epithelial cell | 2.11e-12 | 4 |
sebum secreting cell | 3.65e-11 | 2 |
epithelial cell of sweat gland | 3.65e-11 | 2 |
epithelial cell of skin gland | 3.65e-11 | 2 |
acinar cell of sebaceous gland | 3.65e-11 | 2 |
ecto-epithelial cell | 9.58e-11 | 34 |
keratinocyte | 9.15e-10 | 5 |
acinar cell | 1.28e-09 | 5 |
epithelial cell of alimentary canal | 7.02e-09 | 20 |
epithelial cell of prostate | 3.31e-08 | 3 |
protein secreting cell | 4.29e-08 | 6 |
placental epithelial cell | 1.23e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.21e-22 | 14 |
membranous layer | 1.21e-22 | 14 |
chorion | 2.11e-18 | 7 |
gingival epithelium | 6.17e-17 | 3 |
egg chorion | 1.44e-16 | 3 |
extraembryonic structure | 1.07e-12 | 24 |
jaw skeleton | 1.08e-12 | 4 |
splanchnocranium | 1.08e-12 | 4 |
mammary gland | 2.11e-12 | 4 |
mammary bud | 2.11e-12 | 4 |
mammary ridge | 2.11e-12 | 4 |
mammary placode | 2.11e-12 | 4 |
skin gland | 3.65e-11 | 2 |
epidermis gland | 3.65e-11 | 2 |
gland of integumental system | 3.65e-11 | 2 |
sebaceous gland | 3.65e-11 | 2 |
skin sebaceous gland | 3.65e-11 | 2 |
sweat gland | 3.65e-11 | 2 |
sweat gland placode | 3.65e-11 | 2 |
sebaceous gland placode | 3.65e-11 | 2 |
organ component layer | 1.10e-10 | 66 |
primary subdivision of cranial skeletal system | 3.02e-10 | 5 |
mouth mucosa | 5.09e-10 | 13 |
surface structure | 5.51e-10 | 99 |
protuberance | 1.31e-08 | 6 |
pharyngeal arch | 1.31e-08 | 6 |
embryonic head | 1.31e-08 | 6 |
skin epidermis | 2.62e-08 | 15 |
outer epithelium | 2.62e-08 | 15 |
enveloping layer of ectoderm | 2.62e-08 | 15 |
amnion | 2.58e-07 | 7 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.