FFCP PHASE1:Hg19::chr2:21228661..21228669,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype=CL:0000181!1.22e-40!12;CL:0000417!1.22e-40!12;CL:0000668!1.22e-40!12;CL:0000414!1.22e-40!12;CL:0000412!1.22e-40!12;CL:0000182!1.22e-40!12;CL:0000223!1.61e-15!59;CL:0002563!1.21e-10!4 | |ontology_enrichment_celltype=CL:0000181!1.22e-40!12;CL:0000417!1.22e-40!12;CL:0000668!1.22e-40!12;CL:0000414!1.22e-40!12;CL:0000412!1.22e-40!12;CL:0000182!1.22e-40!12;CL:0000223!1.61e-15!59;CL:0002563!1.21e-10!4 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.09e-42;12 | |ontology_enrichment_celltype_v019=CL:0000182;1.09e-42;12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.02e-42,12;CL:0000223,1.15e-08,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;2.82e-32;11!UBERON:0009497;2.45e-27;13!UBERON:0001041;6.96e-12;30!UBERON:0003104;1.74e-11;31 | |ontology_enrichment_development_v019=UBERON:0004161;2.82e-32;11!UBERON:0009497;2.45e-27;13!UBERON:0001041;6.96e-12;30!UBERON:0003104;1.74e-11;31 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.92e-42!19;UBERON:0006925!5.92e-42!19;UBERON:0008836!5.92e-42!19;UBERON:0008835!4.32e-36!22;UBERON:0003894!4.32e-36!22;UBERON:0009854!1.78e-34!23;UBERON:0007499!1.24e-31!25;UBERON:0009497!1.24e-31!25;UBERON:0000015!1.24e-31!25;UBERON:0002423!1.24e-31!25;UBERON:0006235!1.24e-31!25;UBERON:0004161!1.24e-31!25;UBERON:0005057!2.25e-30!26;UBERON:0009856!2.25e-30!26;UBERON:0002365!2.69e-25!31;UBERON:0002330!2.69e-25!31;UBERON:0003929!7.12e-25!54;UBERON:0002368!2.81e-22!35;UBERON:0004921!2.74e-17!129;UBERON:0004185!2.74e-17!129;UBERON:0000949!4.53e-17!45;UBERON:0005911!9.02e-16!82;UBERON:0002530!1.09e-15!59;UBERON:0001007!5.30e-14!155;UBERON:0001555!5.30e-14!155;UBERON:0007026!5.30e-14!155;UBERON:0005172!9.44e-14!55;UBERON:0005173!9.44e-14!55;UBERON:0004119!1.20e-12!169;UBERON:0000925!1.20e-12!169;UBERON:0006595!1.20e-12!169;UBERON:0000160!2.74e-12!27;UBERON:0002417!2.79e-12!61;UBERON:0000916!2.79e-12!61;UBERON:0001242!1.21e-10!4;UBERON:0001262!1.21e-10!4;UBERON:0004786!1.21e-10!4;UBERON:0004808!1.21e-10!4;UBERON:0001277!1.21e-10!4;UBERON:0005409!1.81e-09!35;UBERON:0003350!1.08e-08!5;UBERON:0000490!1.28e-08!138;UBERON:0000077!1.04e-07!130;UBERON:0001041!3.51e-07!98 | |ontology_enrichment_uberon=UBERON:0002107!5.92e-42!19;UBERON:0006925!5.92e-42!19;UBERON:0008836!5.92e-42!19;UBERON:0008835!4.32e-36!22;UBERON:0003894!4.32e-36!22;UBERON:0009854!1.78e-34!23;UBERON:0007499!1.24e-31!25;UBERON:0009497!1.24e-31!25;UBERON:0000015!1.24e-31!25;UBERON:0002423!1.24e-31!25;UBERON:0006235!1.24e-31!25;UBERON:0004161!1.24e-31!25;UBERON:0005057!2.25e-30!26;UBERON:0009856!2.25e-30!26;UBERON:0002365!2.69e-25!31;UBERON:0002330!2.69e-25!31;UBERON:0003929!7.12e-25!54;UBERON:0002368!2.81e-22!35;UBERON:0004921!2.74e-17!129;UBERON:0004185!2.74e-17!129;UBERON:0000949!4.53e-17!45;UBERON:0005911!9.02e-16!82;UBERON:0002530!1.09e-15!59;UBERON:0001007!5.30e-14!155;UBERON:0001555!5.30e-14!155;UBERON:0007026!5.30e-14!155;UBERON:0005172!9.44e-14!55;UBERON:0005173!9.44e-14!55;UBERON:0004119!1.20e-12!169;UBERON:0000925!1.20e-12!169;UBERON:0006595!1.20e-12!169;UBERON:0000160!2.74e-12!27;UBERON:0002417!2.79e-12!61;UBERON:0000916!2.79e-12!61;UBERON:0001242!1.21e-10!4;UBERON:0001262!1.21e-10!4;UBERON:0004786!1.21e-10!4;UBERON:0004808!1.21e-10!4;UBERON:0001277!1.21e-10!4;UBERON:0005409!1.81e-09!35;UBERON:0003350!1.08e-08!5;UBERON:0000490!1.28e-08!138;UBERON:0000077!1.04e-07!130;UBERON:0001041!3.51e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.14e-47;19!UBERON:0006925;2.14e-47;19!UBERON:0002423;6.58e-36;25!UBERON:0002365;9.23e-28;31!UBERON:0002330;9.23e-28;31!UBERON:0002108;6.31e-26;4!UBERON:0002368;1.60e-24;33!UBERON:0000949;6.33e-18;43!UBERON:0005172;9.69e-11;52!UBERON:0005173;9.69e-11;52!UBERON:0001007;3.33e-10;81!UBERON:0002417;1.78e-09;58!UBERON:0000916;1.78e-09;58!UBERON:0002530;2.38e-09;57!UBERON:0000160;1.20e-07;17 | |ontology_enrichment_uberon_v019=UBERON:0002107;2.14e-47;19!UBERON:0006925;2.14e-47;19!UBERON:0002423;6.58e-36;25!UBERON:0002365;9.23e-28;31!UBERON:0002330;9.23e-28;31!UBERON:0002108;6.31e-26;4!UBERON:0002368;1.60e-24;33!UBERON:0000949;6.33e-18;43!UBERON:0005172;9.69e-11;52!UBERON:0005173;9.69e-11;52!UBERON:0001007;3.33e-10;81!UBERON:0002417;1.78e-09;58!UBERON:0000916;1.78e-09;58!UBERON:0002530;2.38e-09;57!UBERON:0000160;1.20e-07;17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.89e-47,19;UBERON:0006925,1.89e-47,19;UBERON:0008836,1.89e-47,19;UBERON:0008835,6.45e-41,22;UBERON:0003894,6.45e-41,22;UBERON:0009854,4.07e-39,23;UBERON:0007499,6.00e-36,25;UBERON:0009497,6.00e-36,25;UBERON:0000015,6.00e-36,25;UBERON:0002423,6.00e-36,25;UBERON:0006235,6.00e-36,25;UBERON:0004161,6.00e-36,25;UBERON:0009856,1.51e-34,26;UBERON:0002365,6.88e-29,31;UBERON:0002330,6.88e-29,31;UBERON:0002108,7.82e-26,4;UBERON:0002368,1.60e-25,35;UBERON:0000949,1.02e-19,45;UBERON:0003929,2.52e-16,54;UBERON:0005172,2.52e-16,54;UBERON:0005173,2.52e-16,54;UBERON:0002530,6.93e-15,59;UBERON:0002417,1.26e-14,60;UBERON:0000916,1.26e-14,60;UBERON:0004921,2.29e-13,118;UBERON:0001007,1.13e-10,145;UBERON:0001555,1.13e-10,145;UBERON:0007026,1.13e-10,145;UBERON:0005911,1.64e-10,82;UBERON:0001041,7.28e-10,87;UBERON:0004119,1.46e-09,160;UBERON:0000925,1.46e-09,160;UBERON:0006595,1.46e-09,160;UBERON:0005177,2.16e-08,101;UBERON:0011216,9.12e-08,223;UBERON:0000160,1.28e-07,17;UBERON:0009569,1.72e-07,112;UBERON:0003914,3.90e-07,117;UBERON:0005256,8.25e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.478154526838,5.89696330006576,7.68026878685825,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46646002151784,3.21421847686549,2.2243169471881,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,5.30027555648885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00652811080656,1.31135736302374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.478154526838,5.89696330006576,7.68026878685825,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12972560932135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.619202951523374,0,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46646002151784,3.21421847686549,2.2243169471881,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78449243988357,5.30027555648885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00652811080656,1.31135736302374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.1741610430924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p30@APOB | |short_description=p30@APOB | ||
}} | }} |
Revision as of 06:52, 17 November 2012
Short description: | p30@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_30_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -104bp_to_M12413_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | P04114 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.02e-42 | 12 |
endodermal cell | 1.15e-08 | 58 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.