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FFCP PHASE1:Mm9::chr7:25692688..25692751,+: Difference between revisions

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|id=chr7:25692688..25692751,+
|id=chr7:25692688..25692751,+
|ontology_enrichment_celltype=CL:0000791!1.06e-07!9;CL:0000789!1.06e-07!9;CL:0002420!1.06e-07!9;CL:0002419!1.06e-07!9;CL:0000790!1.06e-07!9;CL:0000624!5.37e-07!8
|ontology_enrichment_celltype=CL:0000791!1.06e-07!9;CL:0000789!1.06e-07!9;CL:0002420!1.06e-07!9;CL:0002419!1.06e-07!9;CL:0000790!1.06e-07!9;CL:0000624!5.37e-07!8
|ontology_enrichment_celltype_v019_2=CL:0000791,3.36e-14,9;CL:0000789,3.36e-14,9;CL:0002420,3.36e-14,9;CL:0002419,3.36e-14,9;CL:0000790,3.36e-14,9;CL:0000624,9.36e-13,8;CL:0000084,3.55e-11,11;CL:0000827,3.55e-11,11;CL:0000838,4.78e-10,12;CL:0000893,6.82e-10,6;CL:0002489,6.82e-10,6;CL:0000898,6.82e-10,6;CL:0000809,6.82e-10,6;CL:0000810,6.82e-10,6;CL:0000895,6.82e-10,6;CL:0000808,6.82e-10,6;CL:0000894,6.82e-10,6;CL:0000806,6.82e-10,6;CL:0000807,6.82e-10,6;CL:0000805,6.82e-10,6;CL:0002425,6.82e-10,6;CL:0002436,6.82e-10,6;CL:0002427,6.82e-10,6;CL:0002428,6.82e-10,6;CL:0002429,6.82e-10,6;CL:0002433,6.82e-10,6;CL:0002431,6.82e-10,6;CL:0002432,6.82e-10,6;CL:0000542,4.29e-09,13;CL:0000051,4.29e-09,13;CL:0000738,1.05e-07,17;CL:0002087,1.05e-07,17
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001004!1.55e-18!42;UBERON:0000065!2.66e-18!41;UBERON:0000077!3.46e-13!97;UBERON:0000072!6.09e-13!27;UBERON:0001041!5.94e-12!92;UBERON:0003408!3.68e-11!24;UBERON:0002370!5.87e-11!23;UBERON:0000974!5.87e-11!23;UBERON:0004807!5.87e-11!23;UBERON:0005058!5.87e-11!23;UBERON:0003351!5.87e-11!23;UBERON:0009113!5.87e-11!23;UBERON:0003295!5.87e-11!23;UBERON:0009722!5.87e-11!23;UBERON:0005562!5.87e-11!23;UBERON:0007690!5.87e-11!23;UBERON:0004177!6.14e-11!29;UBERON:0006562!9.76e-11!24;UBERON:0001557!9.76e-11!24;UBERON:0001042!9.76e-11!24;UBERON:0008814!9.76e-11!24;UBERON:0009145!9.76e-11!24;UBERON:0001048!8.89e-09!147;UBERON:0000063!9.51e-09!35;UBERON:0002193!1.38e-08!48;UBERON:0005178!1.96e-08!17;UBERON:0005181!1.96e-08!17;UBERON:0002224!1.96e-08!17;UBERON:0000915!1.96e-08!17;UBERON:0008947!1.96e-08!17;UBERON:0003258!1.96e-08!17;UBERON:0003104!2.31e-08!131;UBERON:0009142!2.31e-08!131;UBERON:0000926!4.05e-08!193;UBERON:0004120!4.05e-08!193;UBERON:0006603!4.05e-08!193;UBERON:0002390!4.64e-08!45;UBERON:0003061!4.64e-08!45;UBERON:0004119!4.15e-07!130;UBERON:0000925!4.15e-07!130;UBERON:0006595!4.15e-07!130;UBERON:0005153!6.89e-07!17
|ontology_enrichment_uberon=UBERON:0001004!1.55e-18!42;UBERON:0000065!2.66e-18!41;UBERON:0000077!3.46e-13!97;UBERON:0000072!6.09e-13!27;UBERON:0001041!5.94e-12!92;UBERON:0003408!3.68e-11!24;UBERON:0002370!5.87e-11!23;UBERON:0000974!5.87e-11!23;UBERON:0004807!5.87e-11!23;UBERON:0005058!5.87e-11!23;UBERON:0003351!5.87e-11!23;UBERON:0009113!5.87e-11!23;UBERON:0003295!5.87e-11!23;UBERON:0009722!5.87e-11!23;UBERON:0005562!5.87e-11!23;UBERON:0007690!5.87e-11!23;UBERON:0004177!6.14e-11!29;UBERON:0006562!9.76e-11!24;UBERON:0001557!9.76e-11!24;UBERON:0001042!9.76e-11!24;UBERON:0008814!9.76e-11!24;UBERON:0009145!9.76e-11!24;UBERON:0001048!8.89e-09!147;UBERON:0000063!9.51e-09!35;UBERON:0002193!1.38e-08!48;UBERON:0005178!1.96e-08!17;UBERON:0005181!1.96e-08!17;UBERON:0002224!1.96e-08!17;UBERON:0000915!1.96e-08!17;UBERON:0008947!1.96e-08!17;UBERON:0003258!1.96e-08!17;UBERON:0003104!2.31e-08!131;UBERON:0009142!2.31e-08!131;UBERON:0000926!4.05e-08!193;UBERON:0004120!4.05e-08!193;UBERON:0006603!4.05e-08!193;UBERON:0002390!4.64e-08!45;UBERON:0003061!4.64e-08!45;UBERON:0004119!4.15e-07!130;UBERON:0000925!4.15e-07!130;UBERON:0006595!4.15e-07!130;UBERON:0005153!6.89e-07!17
|ontology_enrichment_uberon_v019_2=UBERON:0000065,2.01e-33,41;UBERON:0001004,2.21e-32,42;UBERON:0000072,6.42e-27,27;UBERON:0002370,1.59e-23,23;UBERON:0000974,1.59e-23,23;UBERON:0004807,1.59e-23,23;UBERON:0005058,1.59e-23,23;UBERON:0003351,1.59e-23,23;UBERON:0009113,1.59e-23,23;UBERON:0003295,1.59e-23,23;UBERON:0009722,1.59e-23,23;UBERON:0005562,1.59e-23,23;UBERON:0007690,1.59e-23,23;UBERON:0006562,2.82e-22,24;UBERON:0003408,2.82e-22,24;UBERON:0001557,2.82e-22,24;UBERON:0001042,2.82e-22,24;UBERON:0008814,2.82e-22,24;UBERON:0009145,2.82e-22,24;UBERON:0000153,3.68e-19,43;UBERON:0004177,2.44e-17,29;UBERON:0005057,2.44e-17,29;UBERON:0000077,9.91e-17,35;UBERON:0007811,1.02e-15,36;UBERON:0001041,2.72e-12,80;UBERON:0002193,3.45e-12,48;UBERON:0002405,3.45e-12,48;UBERON:0002390,3.69e-12,45;UBERON:0003061,3.69e-12,45;UBERON:0005911,7.95e-12,69;UBERON:0005178,1.31e-11,17;UBERON:0005181,1.31e-11,17;UBERON:0002224,1.31e-11,17;UBERON:0000915,1.31e-11,17;UBERON:0008947,1.31e-11,17;UBERON:0003258,1.31e-11,17;UBERON:0003081,7.59e-11,87;UBERON:0001048,1.59e-09,134;UBERON:0002048,1.03e-07,14;UBERON:0000117,1.03e-07,14;UBERON:0000171,1.03e-07,14;UBERON:0000170,1.03e-07,14;UBERON:0005597,1.03e-07,14;UBERON:0000118,1.03e-07,14;UBERON:0000926,3.93e-07,120;UBERON:0004120,3.93e-07,120;UBERON:0006603,3.93e-07,120;UBERON:0004119,8.44e-07,118;UBERON:0000925,8.44e-07,118;UBERON:0006595,8.44e-07,118
|phase1_expression=2.08193501236232,0,0,0,0,0.671517087647559,0,7.87652272993615,3.09735188733667,4.44722600011788,20.8885921235116,16.113976117058,11.641649635322,13.1130603628496,0.333109761815663,0.404950534779652,0.699561878128147,1.41957974411207,1.50825876966313,0.84877930359606,1.10556277196391,0.198581902401771,0,0.159992422793407,0.45881856213434,0,0,0,0.190023419456374,0,0.443461021310609,0.635030673459631,0,0,0,0,0,0.418531630736908,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0.671130424230945,11.6057942721815,9.07453257684653,0,0,0,0.202316460859598,0,0,0,0,0,0,0,0.599200221036809,0,0,0,0,0,0,0,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0.279182999001381,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0.259786004602869,0,2.81686839553361,0,0,0,15.5873549528074,21.5355885653834,22.2430755806505,0.22836775943812,3.10725460376606,0.148442139064825,0,0,0.230615497256059,0,0.117588707135705,0,6.67426412882809,0.144599356919912,1.76922110389975,2.75003644910596,1.32504911076236,0,0,0,0.41889341362691,0.255457055208591,0,0,0.254140454146129,0.299581278809645,0,0,0,0,0,0.162241263067758,0.305518091550949,0.497627882440372,0,0.210441855886474,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0.12811372028485,0.0937017245597288,0,0.215567992932842,1.89106080167819,2.46331573829528,2.41115305670332,2.22437799380478,2.43776516565517,0.61734640922383,0,0,0,0,0,0.234526059981096,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0.330418782983798,0,0,0.232236671860439,0.257734922644187,0,0,0.190225626112559,0,0,0,0.397912944082302,0,0,0.216138049874694,0,0.379335801906163,0.114248512609729,0,0.407302655690628,0,0.280543279561274,0,0,0,0,0,0.166845105716094,0,0.449724224769707,0,0,0,0,0.648540907100142,0,0,0.372140947668503,0,0.505157755894224,0.358794827043824,0.482443521363367,7.02062122633098,0.37898282354097,0.488894929326078,0.339490171550376,0.234690248288502,1.34005005953453,2.38043640886014,7.02481132288076,1.41871629695572,1.32878813789265,2.23236676120482,3.27726629431476,1.55416483679306,4.19482269886384,1.50791283939272,0,0.491764273019036,0.551873492609465,0,0.117211686592203,0,0.504941854408746,0,0,0,0.238968797952552,0,0,0,0,0,0,0.425820255624806,0,0.325773918707152,0.164970122972535,0,3.39892890616974,1.51161778482376,0.754420319023592,0.885905678642318,0.307435147943927,0.775284879504663,2.18120237686503,0.712994756769443,0.632073515871632,0,0,0,0,0,0,0.177340233642274,0,0,0.913394847343798,3.28540391289194,12.921756322693,0.661585194164886,1.81374878235628,0.322928853391811,0.422190474497091,0.358117032009409,0.820704498725306,0,0,0.854354403989263,0,0.185194527369712,0.753473828018764,0.683471138605126,0.686334519619568,0.339956859987711,1.11961161858926,0.967399816630967,0.954670618015114,0.790839983952838,0.203319467126849,0,0.418176592028937,0,0.269728692769641,0.247960367176008,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.330916980914195,0.194451188344048,0.258319646955462,0,0.234714477291508,0,0.104859344425711,0.241584120826006,0,4.4241556887945,2.63542779877213,7.9087437016917,6.62596197186755,5.19177417435696,7.54989148168807,4.44723163223885,4.28299628806274,4.54349024766664,4.95344243257499,3.42809029465258,4.97035191772737,6.83104075646339,7.36324483743884,0.226730383615211,1.55390167361845,1.25599399253266,1.51096154727671,0,1.31377732815827,0,0.857473516316263,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.682934423016537,0.486213434136588,0.209613162627982,0.551530525350042,0.222246727801615,0.206035057238894,0.64183841918363,0.252697211763798,0,0.377252682772152,0,0.320125762024346,0.287177344778066,0,0.115884325944855,0.38581844092741,1.64834360321323,0.294397840268795,0,0.532427418478012,0.238436189947321,0.436039249896986,0.282328141245992,0.338458431566706,0,0,0.271608227691724,0.561142271657738,0.474540072496697,0.197008964751127,0.409231043169689,0.154936841185966,0.385813221962283,0.749431733813838,1.40358965067245,0.429742108096597,2.10417165275728,1.32354851471709,0.695603506861264
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|short_description=p5@Arhgef1
|short_description=p5@Arhgef1
}}
}}

Revision as of 00:42, 14 November 2012

Short description:p5@Arhgef1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Arhgef1_5end
Coexpression cluster:NA
Association with transcript: 22bp_to_ENSMUST00000151121_5end
EntrezGene:Arhgef1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Arhgef1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.08
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.67
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E97.88
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E73.10
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F24.45
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E620.89
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F116.11
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E411.64
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E813.11
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A21.42
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.51
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.20
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.67
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I911.61
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.07
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.82
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.59
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G221.54
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G322.24
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H93.11
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A86.67
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G21.77
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.30
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.15
eyeball, neonate N00.CNhs11207.633-15C60.14
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H21.89
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B50.62
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.65
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B17.02
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.49
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A61.34
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C67.02
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.33
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A43.28
lung, neonate N25.CNhs11119.1359-25C71.55
lung, neonate N30.CNhs11133.1394-42H24.19
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.12
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F21.51
pancreas, embryo E16.CNhs11003.460-26E50.75
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G312.92
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C31.81
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.36
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.75
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.69
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.97
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B54.42
thymus, embryo E14.CNhs11041.402-44I42.64
thymus, embryo E15.CNhs11005.430-45I27.91
thymus, embryo E16.CNhs11002.456-26C56.63
thymus, embryo E17.CNhs10581.478-18C15.19
thymus, embryo E18.CNhs10595.1273-19G47.55
thymus, neonate N02.CNhs11181.1541-43F84.45
thymus, neonate N03.CNhs11137.2104-43C74.28
thymus, neonate N06.CNhs11197.681-26C44.54
thymus, neonate N07.CNhs11211.713-19D34.95
thymus, neonate N10.CNhs11194.748-24E43.43
thymus, neonate N20.CNhs11186.820-7A24.97
thymus, neonate N25.CNhs11125.1362-25G76.83
thymus, neonate N30.CNhs11132.1393-42G27.36
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H31.55
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F71.26
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.51
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F51.31
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B31.40
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C62.10
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell3.36e-149
alpha-beta T cell3.36e-149
immature T cell3.36e-149
mature T cell3.36e-149
immature alpha-beta T cell3.36e-149
CD4-positive, alpha-beta T cell9.36e-138
T cell3.55e-1111
pro-T cell3.55e-1111
lymphoid lineage restricted progenitor cell4.78e-1012
thymocyte6.82e-106
double negative thymocyte6.82e-106
naive T cell6.82e-106
double-positive, alpha-beta thymocyte6.82e-106
CD4-positive, alpha-beta thymocyte6.82e-106
naive thymus-derived CD4-positive, alpha-beta T cell6.82e-106
DN4 thymocyte6.82e-106
DN1 thymic pro-T cell6.82e-106
DN2 thymocyte6.82e-106
DN3 thymocyte6.82e-106
immature single positive thymocyte6.82e-106
early T lineage precursor6.82e-106
mature CD4 single-positive thymocyte6.82e-106
resting double-positive thymocyte6.82e-106
double-positive blast6.82e-106
CD69-positive double-positive thymocyte6.82e-106
CD69-positive, CD4-positive single-positive thymocyte6.82e-106
CD4-positive, CD8-intermediate double-positive thymocyte6.82e-106
CD24-positive, CD4 single-positive thymocyte6.82e-106
lymphocyte4.29e-0913
common lymphoid progenitor4.29e-0913
leukocyte1.05e-0717
nongranular leukocyte1.05e-0717

Uber anatomy
Ontology termp-valuen
respiratory tract2.01e-3341
respiratory system2.21e-3242
segment of respiratory tract6.42e-2727
thymus1.59e-2323
neck1.59e-2323
respiratory system epithelium1.59e-2323
hemolymphoid system gland1.59e-2323
pharyngeal epithelium1.59e-2323
thymic region1.59e-2323
pharyngeal gland1.59e-2323
entire pharyngeal arch endoderm1.59e-2323
thymus primordium1.59e-2323
early pharyngeal endoderm1.59e-2323
pharynx2.82e-2224
gland of gut2.82e-2224
upper respiratory tract2.82e-2224
chordate pharynx2.82e-2224
pharyngeal arch system2.82e-2224
pharyngeal region of foregut2.82e-2224
anterior region of body3.68e-1943
hemopoietic organ2.44e-1729
immune organ2.44e-1729
mixed endoderm/mesoderm-derived structure9.91e-1735
craniocervical region1.02e-1536
foregut2.72e-1280
hemolymphoid system3.45e-1248
immune system3.45e-1248
hematopoietic system3.69e-1245
blood island3.69e-1245
endo-epithelium7.95e-1269
thoracic cavity element1.31e-1117
thoracic segment organ1.31e-1117
thoracic cavity1.31e-1117
thoracic segment of trunk1.31e-1117
respiratory primordium1.31e-1117
endoderm of foregut1.31e-1117
lateral plate mesoderm7.59e-1187
primordium1.59e-09134
lung1.03e-0714
respiratory tube1.03e-0714
respiration organ1.03e-0714
pair of lungs1.03e-0714
lung primordium1.03e-0714
lung bud1.03e-0714
mesoderm3.93e-07120
mesoderm-derived structure3.93e-07120
presumptive mesoderm3.93e-07120
endoderm-derived structure8.44e-07118
endoderm8.44e-07118
presumptive endoderm8.44e-07118







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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