Personal tools

FFCP PHASE1:Mm9::chr5:66472210..66472248,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=245945
|EntrezGene=245945
|HGNC=
|HGNC=
|MCL_coexpression_id=297
|TSSclassifier=NA
|UniProt=Q91WT8,D3Z5E3
|UniProt=Q91WT8,D3Z5E3
|association_with_transcript=0bp_to_ENSMUST00000113724,ENSMUST00000127275,uc008xok.2_5end
|association_with_transcript=0bp_to_ENSMUST00000113724,ENSMUST00000127275,uc008xok.2_5end
|cluster_id=chr5:66472210..66472248,-
|description=CAGE_peak_2_at_Rbm47_5end
|description=CAGE_peak_2_at_Rbm47_5end
|id=chr5:66472210..66472248,-
|id=chr5:66472210..66472248,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,3.15e-07,25;CL:0002563,7.21e-07,9;CL:0002251,7.21e-07,9;CL:0000223,9.16e-07,20
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!1.06e-25!130;UBERON:0000925!1.06e-25!130;UBERON:0006595!1.06e-25!130;UBERON:0001007!2.45e-25!128;UBERON:0001555!2.45e-25!128;UBERON:0007026!2.45e-25!128;UBERON:0004921!3.69e-24!126;UBERON:0004185!3.69e-24!126;UBERON:0005409!4.01e-23!59;UBERON:0000160!3.50e-22!43;UBERON:0005177!1.13e-12!85;UBERON:0009569!1.43e-11!66;UBERON:0005172!7.75e-10!49;UBERON:0005173!7.75e-10!49;UBERON:0002417!7.75e-10!49;UBERON:0000916!7.75e-10!49;UBERON:0000344!8.83e-10!15;UBERON:0009854!1.02e-09!23;UBERON:0009856!1.02e-09!23;UBERON:0002107!5.11e-09!22;UBERON:0007499!5.11e-09!22;UBERON:0006925!5.11e-09!22;UBERON:0009497!5.11e-09!22;UBERON:0000015!5.11e-09!22;UBERON:0002423!5.11e-09!22;UBERON:0006235!5.11e-09!22;UBERON:0008835!5.11e-09!22;UBERON:0003894!5.11e-09!22;UBERON:0004161!5.11e-09!22;UBERON:0008836!5.11e-09!22;UBERON:0001242!7.90e-09!13;UBERON:0000060!7.90e-09!13;UBERON:0001262!7.90e-09!13;UBERON:0004786!7.90e-09!13;UBERON:0002100!9.10e-09!98;UBERON:0000077!1.43e-08!97;UBERON:0000466!1.43e-08!79;UBERON:0002365!5.59e-08!25;UBERON:0002330!5.59e-08!25;UBERON:0003104!9.33e-08!131;UBERON:0009142!9.33e-08!131;UBERON:0001041!1.03e-07!92;UBERON:0000481!3.95e-07!230;UBERON:0002108!5.35e-07!16;UBERON:0001008!8.33e-07!17;UBERON:0006554!8.35e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0005409,4.15e-21,47;UBERON:0000160,1.21e-20,31;UBERON:0004119,1.28e-20,118;UBERON:0000925,1.28e-20,118;UBERON:0006595,1.28e-20,118;UBERON:0001007,2.84e-20,116;UBERON:0001555,2.84e-20,116;UBERON:0007026,2.84e-20,116;UBERON:0004921,3.83e-19,114;UBERON:0005177,9.19e-15,79;UBERON:0002100,1.49e-11,90;UBERON:0000344,1.02e-10,15;UBERON:0009854,1.19e-10,23;UBERON:0009856,1.19e-10,23;UBERON:0009569,2.10e-10,66;UBERON:0002107,7.17e-10,22;UBERON:0007499,7.17e-10,22;UBERON:0006925,7.17e-10,22;UBERON:0009497,7.17e-10,22;UBERON:0000015,7.17e-10,22;UBERON:0002423,7.17e-10,22;UBERON:0006235,7.17e-10,22;UBERON:0008835,7.17e-10,22;UBERON:0003894,7.17e-10,22;UBERON:0004161,7.17e-10,22;UBERON:0008836,7.17e-10,22;UBERON:0001242,1.17e-09,13;UBERON:0001262,1.17e-09,13;UBERON:0004786,1.17e-09,13;UBERON:0005172,7.65e-09,49;UBERON:0005173,7.65e-09,49;UBERON:0002417,7.65e-09,49;UBERON:0000916,7.65e-09,49;UBERON:0002365,2.67e-08,25;UBERON:0002330,2.67e-08,25;UBERON:0001008,1.90e-07,19;UBERON:0006554,2.00e-07,18;UBERON:0004923,3.13e-07,24;UBERON:0003350,7.21e-07,9;UBERON:0004808,7.21e-07,9;UBERON:0001277,7.21e-07,9;UBERON:0002113,8.98e-07,14;UBERON:0003918,8.98e-07,14;UBERON:0011143,8.98e-07,14;UBERON:0005095,8.98e-07,14;UBERON:0007687,8.98e-07,14
|phase1_expression=0,59.3258192986914,49.1399178540699,70.4741612344914,65.6173406229715,34.9188885576731,29.4351927150362,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,18.1142208021779,0,0,30.7185451763341,25.9232487605902,33.8796858827862,46.091533589021,39.8621780468895,39.3348478274694,46.8776041353471,36.5855342581253,0,0,0,20.5084650023405,15.4598220183398,16.9460565697766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3628179011889,18.9293252935905,27.19885334831,45.3350680975766,27.9403859502498,56.4513877742643,18.117330196996,0,0,0,0,0,0,0,1.08245520505607,2.78695852022608,2.02209778005913,43.7324259324,0,0,0.520455980298408,0.913396434936424,1.84492397804847,0.60289056221049,0.23517741427141,0.376999773989026,194.048049671483,0,0,0,0,0,82.0123749359738,0,0,76.6371165625774,0,0,0,0,0,0,0,0,0,0,1.93494791315601,2.48813941220186,10.3616330957807,2.73574412652416,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.374806898238915,1.29351685369508,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,0,105.073172988848,51.8323110660547,2.55945900642281,5.34144345279009,18.2991795077373,42.958590744772,39.360913760542,35.1917408308234,56.9434873853414,42.6570292735188,27.6468729680296,30.8382531663784,32.9489307231313,49.4350674759822,52.5215461195507,62.92864234838,4.55202962287396,8.45438993311993,18.0332377076929,15.6811522440892,21.9166310499417,33.454786087682,39.0169434056667,82.5140727205976,71.9054173513497,79.9613622213267,36.1672205046322,2.00214126859313,3.34150291692445,5.62155280962134,6.8972441272091,7.95884627182976,10.4396599230382,16.686375972147,16.2135226775035,10.4333337011471,10.0637744569148,11.9085103253921,10.9213185590096,22.9846778931872,31.0357525392908,35.7008205808892,5.54259570499814,0.757965647081939,3.09633455239849,3.39490171550376,1.87752198630802,9.88286918906713,7.61739650835244,13.6593553500459,3.15270288212382,2.87904096543407,1.91345722388985,2.94953966488328,3.7990696010497,3.61622646453779,0,0,0.491764273019036,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0.712262414669021,0.488660878060728,4.78413356620353,3.98235415019888,8.49732226542435,13.9068836203785,18.8605079755898,23.9194533233426,14.7568871013085,11.1124166062335,10.9060118843252,5.70395805415554,11.0612865277536,8.4334886859999,6.18813259489121,0,0.18006109403131,0,0,0,0,0,0,3.28540391289194,3.81297727554876,11.467476698858,0.32977250588296,0,0,0,0.164140899745061,53.0495122666328,0,0,2.47664241555867,0,0.188368457004691,0,0,0,0,0,54.4162252268615,4.74503990371703,14.4356821660063,18.1448972580626,14.8452690170273,21.8362563746178,20.9039736896472,29.2593233267689,62.8214260761671,74.1397647229055,0,0,0,0,0,0,0,0.352071715937262,1.3020438484395,0.104859344425711,0,0.864090018773596,0,0,0,0,0.358053391334963,0,0,0.295379054349154,0.302899349844443,0.0762068066549998,0.100826185136841,0.38983152295901,0.0962118416403295,0.116876902181569,0.906921534460845,0,0,0,9.65947970160952,5.63047426353546,14.1026750685794,3.42989406526505,6.01886524842436,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.682934423016537,3.16038732188782,2.93458427679175,5.51530525350042,4.00044110042907,4.12070114477788,5.13470735346904,4.80124702351215,5.32306529769503,4.71565853465191,6.18033949301224,5.05798703998467,5.57124048869449,4.28664322154766,6.83717523074647,5.59436739344745,2.47251540481984,5.00476328456951,4.11443102862498,6.74408063405482,6.67621331852499,3.19762116591123,3.48204707536723,4.99226186560891,4.57319932181931,3.94604567156764,5.70377278152619,4.48913817326191,5.21994079746366,6.40279135441163,6.54769669071503,6.8172210121825,4.62975866354739,0,6.31615342802603,5.15690529715916,0.956441660344217,0.220591419119515,0.231867835620421
|phase1_expression=0,59.3258192986914,49.1399178540699,70.4741612344914,65.6173406229715,34.9188885576731,29.4351927150362,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,18.1142208021779,0,0,30.7185451763341,25.9232487605902,33.8796858827862,46.091533589021,39.8621780468895,39.3348478274694,46.8776041353471,36.5855342581253,0,0,0,20.5084650023405,15.4598220183398,16.9460565697766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335565212115473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.3628179011889,18.9293252935905,27.19885334831,45.3350680975766,27.9403859502498,56.4513877742643,18.117330196996,0,0,0,0,0,0,0,1.08245520505607,2.78695852022608,2.02209778005913,43.7324259324,0,0,0.520455980298408,0.913396434936424,1.84492397804847,0.60289056221049,0.23517741427141,0.376999773989026,194.048049671483,0,0,0,0,0,82.0123749359738,0,0,76.6371165625774,0,0,0,0,0,0,0,0,0,0,1.93494791315601,2.48813941220186,10.3616330957807,2.73574412652416,0.260240885925407,0.229902104433473,0.180062129805349,0.30140963567143,0.272145996605311,0.12811372028485,0.374806898238915,1.29351685369508,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0.420579897128254,0,105.073172988848,51.8323110660547,2.55945900642281,5.34144345279009,18.2991795077373,42.958590744772,39.360913760542,35.1917408308234,56.9434873853414,42.6570292735188,27.6468729680296,30.8382531663784,32.9489307231313,49.4350674759822,52.5215461195507,62.92864234838,4.55202962287396,8.45438993311993,18.0332377076929,15.6811522440892,21.9166310499417,33.454786087682,39.0169434056667,82.5140727205976,71.9054173513497,79.9613622213267,36.1672205046322,2.00214126859313,3.34150291692445,5.62155280962134,6.8972441272091,7.95884627182976,10.4396599230382,16.686375972147,16.2135226775035,10.4333337011471,10.0637744569148,11.9085103253921,10.9213185590096,22.9846778931872,31.0357525392908,35.7008205808892,5.54259570499814,0.757965647081939,3.09633455239849,3.39490171550376,1.87752198630802,9.88286918906713,7.61739650835244,13.6593553500459,3.15270288212382,2.87904096543407,1.91345722388985,2.94953966488328,3.7990696010497,3.61622646453779,0,0,0.491764273019036,1.65562047782839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41940085208269,0.712262414669021,0.488660878060728,4.78413356620353,3.98235415019888,8.49732226542435,13.9068836203785,18.8605079755898,23.9194533233426,14.7568871013085,11.1124166062335,10.9060118843252,5.70395805415554,11.0612865277536,8.4334886859999,6.18813259489121,0,0.18006109403131,0,0,0,0,0,0,3.28540391289194,3.81297727554876,11.467476698858,0.32977250588296,0,0,0,0.164140899745061,53.0495122666328,0,0,2.47664241555867,0,0.188368457004691,0,0,0,0,0,54.4162252268615,4.74503990371703,14.4356821660063,18.1448972580626,14.8452690170273,21.8362563746178,20.9039736896472,29.2593233267689,62.8214260761671,74.1397647229055,0,0,0,0,0,0,0,0.352071715937262,1.3020438484395,0.104859344425711,0,0.864090018773596,0,0,0,0,0.358053391334963,0,0,0.295379054349154,0.302899349844443,0.0762068066549998,0.100826185136841,0.38983152295901,0.0962118416403295,0.116876902181569,0.906921534460845,0,0,0,9.65947970160952,5.63047426353546,14.1026750685794,3.42989406526505,6.01886524842436,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.682934423016537,3.16038732188782,2.93458427679175,5.51530525350042,4.00044110042907,4.12070114477788,5.13470735346904,4.80124702351215,5.32306529769503,4.71565853465191,6.18033949301224,5.05798703998467,5.57124048869449,4.28664322154766,6.83717523074647,5.59436739344745,2.47251540481984,5.00476328456951,4.11443102862498,6.74408063405482,6.67621331852499,3.19762116591123,3.48204707536723,4.99226186560891,4.57319932181931,3.94604567156764,5.70377278152619,4.48913817326191,5.21994079746366,6.40279135441163,6.54769669071503,6.8172210121825,4.62975866354739,0,6.31615342802603,5.15690529715916,0.956441660344217,0.220591419119515,0.231867835620421
|short_description=p2@Rbm47
|short_description=p2@Rbm47
}}
}}

Latest revision as of 03:58, 26 September 2015

Short description:p2@Rbm47
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rbm47_5end
Coexpression cluster:MCL_coexpression_mm9:297
Association with transcript: 0bp_to_ENSMUST00000113724, ENSMUST00000127275, uc008xok.2_5end
EntrezGene:Rbm47
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rbm47

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I559.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I649.14
CD326+ enterocyte, pool1.CNhs13542.11848-124I370.47
CD326+ enterocyte, pool2.CNhs13197.11849-124I465.62
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I734.92
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I829.44
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A318.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D130.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D225.92
GP2+ M cell, pool1.CNhs13228.11845-124H933.88
GP2+ M cell, pool2.CNhs13231.11846-124I146.09
GP2+ M cell, pool3.CNhs13240.11847-124I239.86
Ileum epithelium, pool1.CNhs13199.10252-104B939.33
Ileum epithelium, pool2.CNhs13232.10253-104C146.88
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C836.59
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F520.51
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F615.46
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.95
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.34
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G315.36
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F718.93
Mouse hepatocyte, donor1.CNhs13078.11714-123C427.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C845.34
Mouse hepatocyte, donor6.CNhs13090.11822-124F427.94
Mouse hepatocyte, donor8.CNhs13091.11824-124F656.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A718.12
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.08
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G22.79
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.02
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B643.73
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I11.84
adrenal gland, embryo E18.CNhs11026.1262-18F50.60
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A8194.05
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H482.01
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H776.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.93
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.49
epididymis, adult.CNhs10490.58-23B210.36
eyeball, adult.CNhs10484.31-12G42.74
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.37
eyeball, neonate N16.CNhs11188.777-19A21.29
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I3105.07
intestine, adult.CNhs10496.178-9A351.83
intestine, embryo E12.CNhs11019.1251-16I52.56
intestine, embryo E13.CNhs11010.381-16D55.34
intestine, embryo E15.CNhs10602.976-16D818.30
intestine, embryo E16.CNhs10585.463-22H442.96
intestine, embryo E17.CNhs10582.482-18D339.36
intestine, embryo E18.CNhs10526.1289-20F735.19
intestine, neonate N00.CNhs11126.644-26D156.94
intestine, neonate N01.CNhs11192.1322-23E942.66
intestine, neonate N06.CNhs11102.688-20B827.65
intestine, neonate N07.CNhs11095.720-20F230.84
intestine, neonate N10.CNhs11098.755-23A532.95
intestine, neonate N20.CNhs11187.827-18D149.44
intestine, neonate N25.CNhs11121.1352-25E352.52
intestine, neonate N30.CNhs11131.1384-42G162.93
kidney, embryo E14.CNhs10606.411-4I94.55
kidney, embryo E15.CNhs10997.434-16F88.45
kidney, embryo E16.CNhs10584.464-22A518.03
kidney, embryo E17.CNhs11028.483-18I215.68
kidney, embryo E18.CNhs11001.1288-20C721.92
kidney, neonate N00.CNhs11214.646-21G733.45
kidney, neonate N10.CNhs11206.758-6D539.02
kidney, neonate N20.CNhs11113.832-19I182.51
kidney, neonate N25.CNhs11122.1353-25F371.91
kidney, neonate N30.CNhs11203.1385-42H179.96
liver, adult pregnant day01.CNhs10466.508-5B236.17
liver, embryo E12.CNhs10601.355-15F82.00
liver, embryo E13.CNhs10524.378-3H63.34
liver, embryo E14.CNhs10594.409-16E15.62
liver, embryo E15.CNhs10520.433-16D76.90
liver, embryo E16.CNhs10523.462-17F57.96
liver, embryo E17.CNhs10510.481-18A310.44
liver, embryo E18.CNhs10579.499-43G416.69
liver, neonate N00.CNhs11117.641-24F416.21
liver, neonate N03.CNhs11123.1345-25G210.43
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H211.91
liver, neonate N10.CNhs11115.751-24B910.92
liver, neonate N20.CNhs11220.823-25A322.98
liver, neonate N25.CNhs11198.1368-26H131.04
liver, neonate N30.CNhs11106.1382-42D135.70
lung, adult.CNhs10474.28-22B15.54
lung, embryo E12.CNhs10522.354-16G20.76
lung, embryo E14.CNhs10604.404-26F83.10
lung, embryo E15.CNhs11020.432-17C53.39
lung, embryo E16.CNhs10998.458-17B61.88
lung, embryo E17.CNhs10605.480-44A69.88
lung, embryo E18.CNhs10583.1287-20I67.62
lung, neonate N00.CNhs11224.640-42C613.66
lung, neonate N06.CNhs11212.683-20E53.15
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E61.91
lung, neonate N20.CNhs11109.822-18A42.95
lung, neonate N25.CNhs11119.1359-25C73.80
lung, neonate N30.CNhs11133.1394-42H23.62
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H21.66
medulla oblongata, adult.CNhs10477.17-12C20.00
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I71.42
ovary, embryo E18.CNhs11040.505-44H70.71
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G64.78
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F48.50
pancreas, embryo E15.CNhs11042.1556-45F213.91
pancreas, embryo E16.CNhs11003.460-26E518.86
pancreas, embryo E17.CNhs10599.1558-45G323.92
pancreas, embryo E18.CNhs10580.1535-43I714.76
pancreas, neonate N00.CNhs11105.645-26G911.11
pancreas, neonate N01.CNhs11138.1531-43D710.91
pancreas, neonate N02.CNhs11139.1539-43D85.70
pancreas, neonate N16.CNhs11136.787-43B611.06
pancreas, neonate N25.CNhs11094.1555-45E28.43
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I73.29
placenta, adult pregnant day17.CNhs10464.577-18G33.81
prostate, adult.CNhs10470.859-1F811.47
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I153.05
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C12.48
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H654.42
stomach, embryo E12.CNhs10588.356-43E34.75
stomach, embryo E15.CNhs10603.1252-16G814.44
stomach, embryo E16.CNhs11022.459-17D418.14
stomach, embryo E17.CNhs11006.1035-18D514.85
stomach, embryo E18.CNhs10999.1286-20C621.84
stomach, neonate N03.CNhs11193.1340-24B820.90
stomach, neonate N07.CNhs11210.718-18A929.26
stomach, neonate N25.CNhs11104.1355-25E462.82
stomach, neonate N30.CNhs11134.1386-42I174.14
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I41.30
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.39
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E49.66
uterus, adult pregnant day19.CNhs10497.590-15F55.63
uterus, adult.CNhs10509.92-27E514.10
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F86.02
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B12.93
whole body, embryo E16.CNhs10514.453-14F25.52
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.32
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.29
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.84
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G56.74
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.48
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.99
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.95
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G55.22
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.40
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G56.55
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.82
whole body, embryo E17.5.CNhs10513.490-9F94.63
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B36.32
whole body, neonate N00.CNhs10525.657-19C25.16
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell3.15e-0725
intestinal epithelial cell7.21e-079
epithelial cell of alimentary canal7.21e-079
endodermal cell9.16e-0720

Uber anatomy
Ontology termp-valuen
gastrointestinal system4.15e-2147
intestine1.21e-2031
endoderm-derived structure1.28e-20118
endoderm1.28e-20118
presumptive endoderm1.28e-20118
digestive system2.84e-20116
digestive tract2.84e-20116
primitive gut2.84e-20116
subdivision of digestive tract3.83e-19114
trunk region element9.19e-1579
trunk1.49e-1190
mucosa1.02e-1015
digestive tract diverticulum1.19e-1023
sac1.19e-1023
subdivision of trunk2.10e-1066
liver7.17e-1022
epithelial sac7.17e-1022
digestive gland7.17e-1022
epithelium of foregut-midgut junction7.17e-1022
anatomical boundary7.17e-1022
hepatobiliary system7.17e-1022
foregut-midgut junction7.17e-1022
hepatic diverticulum7.17e-1022
liver primordium7.17e-1022
septum transversum7.17e-1022
liver bud7.17e-1022
intestinal mucosa1.17e-0913
wall of intestine1.17e-0913
gastrointestinal system mucosa1.17e-0913
abdomen element7.65e-0949
abdominal segment element7.65e-0949
abdominal segment of trunk7.65e-0949
abdomen7.65e-0949
exocrine gland2.67e-0825
exocrine system2.67e-0825
renal system1.90e-0719
urinary system structure2.00e-0718
organ component layer3.13e-0724
epithelium of mucosa7.21e-079
gastrointestinal system epithelium7.21e-079
intestinal epithelium7.21e-079
kidney8.98e-0714
kidney mesenchyme8.98e-0714
upper urinary tract8.98e-0714
kidney rudiment8.98e-0714
kidney field8.98e-0714
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr5:66472210..66472248,-&oldid=4231753"