FFCP PHASE1:Mm9::chr7:58877078..58877091,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=140919 | |EntrezGene=140919 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=224 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BLE7 | |UniProt=Q8BLE7 | ||
|association_with_transcript=-108bp_to_ENSMUST00000032710,NM_080853,uc009hcf.2_5end | |association_with_transcript=-108bp_to_ENSMUST00000032710,NM_080853,uc009hcf.2_5end | ||
|cluster_id=chr7:58877078..58877091,+ | |||
|description=CAGE_peak_6_at_Slc17a6_5end | |description=CAGE_peak_6_at_Slc17a6_5end | ||
|id=chr7:58877078..58877091,+ | |id=chr7:58877078..58877091,+ | ||
|ontology_enrichment_celltype=CL:0000117!5.44e-23!23;CL:0000337!5.44e-23!23;CL:0000540!6.66e-14!33;CL:0000047!6.66e-14!33;CL:0000031!6.66e-14!33;CL:0000404!6.66e-14!33;CL:0000393!9.49e-11!39;CL:0000211!9.49e-11!39;CL:0002319!4.26e-10!43;CL:0000221!1.02e-09!44;CL:0000133!1.02e-09!44;CL:0000055!8.67e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.82e-44,23;CL:0000337,4.82e-44,23;CL:0000540,4.71e-30,33;CL:0000047,4.71e-30,33;CL:0000031,4.71e-30,33;CL:0000404,4.71e-30,33;CL:0000393,4.29e-25,39;CL:0000211,4.29e-25,39;CL:0002319,1.49e-22,43;CL:0000221,5.45e-22,44;CL:0000133,5.45e-22,44;CL:0002613,1.10e-15,3;CL:0000120,1.54e-15,3;CL:0002612,7.10e-15,3;CL:0002321,5.69e-13,70;CL:0000723,1.99e-09,91;CL:0000048,1.99e-09,91;CL:0000034,1.07e-08,97;CL:0002614,8.97e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!6.83e-14!71;UBERON:0003075!6.83e-14!71;UBERON:0007284!6.83e-14!71;UBERON:0001049!6.71e-13!52;UBERON:0005068!6.71e-13!52;UBERON:0006241!6.71e-13!52;UBERON:0007135!6.71e-13!52;UBERON:0000033!4.64e-12!63;UBERON:0000073!7.78e-12!75;UBERON:0001016!7.78e-12!75;UBERON:0001017!1.39e-11!73;UBERON:0005743!1.39e-11!73;UBERON:0003056!1.50e-11!49;UBERON:0004121!1.96e-11!102;UBERON:0000924!1.96e-11!102;UBERON:0006601!1.96e-11!102;UBERON:0002020!7.35e-11!34;UBERON:0002616!2.45e-09!49;UBERON:0000955!5.16e-09!50;UBERON:0006238!5.16e-09!50;UBERON:0002298!1.26e-08!6;UBERON:0002420!2.75e-08!8;UBERON:0007245!2.75e-08!8;UBERON:0010009!2.75e-08!8;UBERON:0010011!2.75e-08!8;UBERON:0000454!2.75e-08!8;UBERON:0002240!4.00e-08!6;UBERON:0005174!4.00e-08!6;UBERON:0001137!4.00e-08!6;UBERON:0003076!9.05e-08!12;UBERON:0003057!9.05e-08!12;UBERON:0001948!3.27e-07!5;UBERON:0002315!3.27e-07!5;UBERON:0003080!3.31e-07!40;UBERON:0002791!9.86e-07!29;UBERON:0003528!9.86e-07!29;UBERON:0001893!9.86e-07!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.35e-21,73;UBERON:0001016,3.49e-20,75;UBERON:0000073,9.89e-20,54;UBERON:0001049,6.72e-18,52;UBERON:0005068,6.72e-18,52;UBERON:0006241,6.72e-18,52;UBERON:0007135,6.72e-18,52;UBERON:0004121,2.12e-15,95;UBERON:0000924,2.12e-15,95;UBERON:0006601,2.12e-15,95;UBERON:0001948,3.58e-15,5;UBERON:0002315,3.58e-15,5;UBERON:0002020,4.89e-15,34;UBERON:0002257,7.10e-15,3;UBERON:0002420,8.38e-15,8;UBERON:0007245,8.38e-15,8;UBERON:0010009,8.38e-15,8;UBERON:0010011,8.38e-15,8;UBERON:0000454,8.38e-15,8;UBERON:0002346,4.09e-14,64;UBERON:0003075,4.09e-14,64;UBERON:0007284,4.09e-14,64;UBERON:0003076,2.40e-13,12;UBERON:0003057,2.40e-13,12;UBERON:0002240,1.11e-12,6;UBERON:0005174,1.11e-12,6;UBERON:0001137,1.11e-12,6;UBERON:0010371,4.36e-12,73;UBERON:0002950,7.04e-11,4;UBERON:0001891,7.04e-11,4;UBERON:0009616,7.04e-11,4;UBERON:0010286,7.04e-11,4;UBERON:0002616,1.32e-10,46;UBERON:0000955,2.40e-10,47;UBERON:0006238,2.40e-10,47;UBERON:0001896,8.81e-10,2;UBERON:0002298,8.81e-10,2;UBERON:0005290,8.81e-10,2;UBERON:0010096,8.81e-10,2;UBERON:0000369,1.31e-09,5;UBERON:0002435,1.31e-09,5;UBERON:0000204,1.31e-09,5;UBERON:0010082,1.31e-09,5;UBERON:0010314,4.22e-09,92;UBERON:0003080,2.52e-08,40;UBERON:0003528,3.10e-07,29;UBERON:0002791,3.10e-07,29;UBERON:0001893,3.10e-07,29;UBERON:0000025,7.09e-07,114;UBERON:0002038,8.97e-07,3;UBERON:0009663,8.97e-07,3;UBERON:0009661,8.97e-07,3;UBERON:0000125,8.97e-07,3;UBERON:0002308,8.97e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,4.23192783417626,2.53532561402472,0,0,0,0,0,0,0,1.24427534770173,0.675029691658453,1.47227472945967,0.285650984403804,1.10434270475807,0.367472397644862,0.0958454710182364,0,0,1.53224805702225,0.46081959976873,4.2203612073662,5.03182039813253,3.12548022334056,0.558365998002762,1.12552522006336,1.06958773443767,2.06240009831567,1.56608848879013,2.23679334990361,0,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,3.44518470631092,0,0.376963056338593,0,0,1.45451631191692,0.648965052271031,0,0,0,0.210441855886474,0,0.459804208866946,0.180062129805349,0.60281927134286,0.340182495756639,0.640568601424249,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.68741272937475,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0.341467211508268,0.729320151204882,0.628839487883947,0.551530525350042,0,0.206035057238894,0.320919209591815,0.505394423527595,0,0.188626341386076,0.655490552289177,0.576226371643824,0.574354689556133,0,0.927074607558844,0.578727661391115,0,0.294397840268795,0.685738504770831,0.70990322463735,0.953744759789284,0.581385666529314,0.376437521661322,0.169229215783353,0.365855945745545,0.526139422875686,0.679020569229309,0,0.474540072496697,0.394017929502254,0,0.929621047115796,0.385813221962283,0.499621155875892,0.467863216890817,0.429742108096597,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.84401275633236,4.23192783417626,2.53532561402472,0,0,0,0,0,0,0,1.24427534770173,0.675029691658453,1.47227472945967,0.285650984403804,1.10434270475807,0.367472397644862,0.0958454710182364,0,0,1.53224805702225,0.46081959976873,4.2203612073662,5.03182039813253,3.12548022334056,0.558365998002762,1.12552522006336,1.06958773443767,2.06240009831567,1.56608848879013,2.23679334990361,0,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,3.44518470631092,0,0.376963056338593,0,0,1.45451631191692,0.648965052271031,0,0,0,0.210441855886474,0,0.459804208866946,0.180062129805349,0.60281927134286,0.340182495756639,0.640568601424249,0.281105173679186,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44495530989013,1.05490517932983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329098041204242,0,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460325236507177,0,0.68741272937475,0,0,0,0,0,0,0.518936737920883,0.399024873401031,0.341467211508268,0.729320151204882,0.628839487883947,0.551530525350042,0,0.206035057238894,0.320919209591815,0.505394423527595,0,0.188626341386076,0.655490552289177,0.576226371643824,0.574354689556133,0,0.927074607558844,0.578727661391115,0,0.294397840268795,0.685738504770831,0.70990322463735,0.953744759789284,0.581385666529314,0.376437521661322,0.169229215783353,0.365855945745545,0.526139422875686,0.679020569229309,0,0.474540072496697,0.394017929502254,0,0.929621047115796,0.385813221962283,0.499621155875892,0.467863216890817,0.429742108096597,0,0,0 | ||
|short_description=p6@Slc17a6 | |short_description=p6@Slc17a6 | ||
}} | }} |
Latest revision as of 23:23, 26 September 2015
Short description: | p6@Slc17a6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Slc17a6_5end |
Coexpression cluster: | MCL_coexpression_mm9:224 |
Association with transcript: | -108bp_to_ENSMUST00000032710, NM_080853, uc009hcf.2_5end |
EntrezGene: | Slc17a6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.82e-44 | 23 |
neuroblast (sensu Vertebrata) | 4.82e-44 | 23 |
neuron | 4.71e-30 | 33 |
neuronal stem cell | 4.71e-30 | 33 |
neuroblast | 4.71e-30 | 33 |
electrically signaling cell | 4.71e-30 | 33 |
electrically responsive cell | 4.29e-25 | 39 |
electrically active cell | 4.29e-25 | 39 |
neural cell | 1.49e-22 | 43 |
ectodermal cell | 5.45e-22 | 44 |
neurectodermal cell | 5.45e-22 | 44 |
striatum neuron | 1.10e-15 | 3 |
granule cell | 1.54e-15 | 3 |
neuron of the ventral spinal cord | 7.10e-15 | 3 |
embryonic cell | 5.69e-13 | 70 |
somatic stem cell | 1.99e-09 | 91 |
multi fate stem cell | 1.99e-09 | 91 |
stem cell | 1.07e-08 | 97 |
neuron of the substantia nigra | 8.97e-07 | 3 |