FFCP PHASE1:Mm9::chr6:83276023..83276058,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232157 | |EntrezGene=232157 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=586 | |||
|TSSclassifier=NA | |||
|UniProt=Q921Y0,Q3UDM0 | |UniProt=Q921Y0,Q3UDM0 | ||
|association_with_transcript=0bp_to_ENSMUST00000133045,NM_145571,uc009cnf.1,uc012eny.1_5end | |association_with_transcript=0bp_to_ENSMUST00000133045,NM_145571,uc009cnf.1,uc012eny.1_5end | ||
|cluster_id=chr6:83276023..83276058,+ | |||
|description=CAGE_peak_1_at_Mob1a_5end | |description=CAGE_peak_1_at_Mob1a_5end | ||
|id=chr6:83276023..83276058,+ | |id=chr6:83276023..83276058,+ | ||
|ontology_enrichment_celltype=CL:0000063!8.38e-14!66;CL:0000838!2.53e-08!12;CL:0002320!5.52e-08!46;CL:0000134!5.52e-08!46;CL:0000084!1.09e-07!11;CL:0000827!1.09e-07!11;CL:0000542!1.27e-07!13;CL:0000051!1.27e-07!13;CL:0000988!2.18e-07!32;CL:0002032!2.18e-07!32;CL:0000037!2.18e-07!32;CL:0000566!2.18e-07!32;CL:0000837!2.18e-07!32;CL:0002031!3.49e-07!25;CL:0000738!6.19e-07!17;CL:0002087!6.19e-07!17;CL:0000219!8.09e-07!54;CL:0000791!8.15e-07!9;CL:0000789!8.15e-07!9;CL:0002420!8.15e-07!9;CL:0002419!8.15e-07!9;CL:0000790!8.15e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.53e-08,12;CL:0002320,5.52e-08,46;CL:0000134,5.52e-08,46;CL:0000084,1.09e-07,11;CL:0000827,1.09e-07,11;CL:0000542,1.27e-07,13;CL:0000051,1.27e-07,13;CL:0000988,2.18e-07,32;CL:0002032,2.18e-07,32;CL:0000037,2.18e-07,32;CL:0000837,2.18e-07,32;CL:0002031,3.49e-07,25;CL:0000738,6.19e-07,17;CL:0002087,6.19e-07,17;CL:0000219,8.09e-07,54;CL:0000791,8.15e-07,9;CL:0000789,8.15e-07,9;CL:0002420,8.15e-07,9;CL:0002419,8.15e-07,9;CL:0000790,8.15e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!1.75e-13!130;UBERON:0000925!1.75e-13!130;UBERON:0006595!1.75e-13!130;UBERON:0002193!5.70e-13!48;UBERON:0001007!7.77e-13!128;UBERON:0001555!7.77e-13!128;UBERON:0007026!7.77e-13!128;UBERON:0004921!3.00e-12!126;UBERON:0004185!3.00e-12!126;UBERON:0002390!7.34e-12!45;UBERON:0003061!7.34e-12!45;UBERON:0002405!6.01e-11!70;UBERON:0000926!2.22e-10!193;UBERON:0004120!2.22e-10!193;UBERON:0006603!2.22e-10!193;UBERON:0001004!2.23e-10!42;UBERON:0000065!3.17e-10!41;UBERON:0005911!4.44e-10!69;UBERON:0000490!6.84e-10!66;UBERON:0003104!7.04e-10!131;UBERON:0009142!7.04e-10!131;UBERON:0004177!1.57e-08!29;UBERON:0002384!5.52e-08!46;UBERON:0000077!7.29e-08!97;UBERON:0003081!9.14e-08!88;UBERON:0004923!1.15e-07!24;UBERON:0000072!1.50e-07!27;UBERON:0003929!2.75e-07!55 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,4.12e-18,118;UBERON:0000925,4.12e-18,118;UBERON:0006595,4.12e-18,118;UBERON:0001007,2.24e-17,116;UBERON:0001555,2.24e-17,116;UBERON:0007026,2.24e-17,116;UBERON:0004921,1.04e-16,114;UBERON:0002193,5.70e-13,48;UBERON:0002405,5.70e-13,48;UBERON:0002390,7.34e-12,45;UBERON:0003061,7.34e-12,45;UBERON:0001041,1.72e-10,80;UBERON:0000077,2.04e-10,35;UBERON:0001004,2.23e-10,42;UBERON:0000065,3.17e-10,41;UBERON:0005911,4.44e-10,69;UBERON:0000490,6.84e-10,66;UBERON:0000926,2.82e-09,120;UBERON:0004120,2.82e-09,120;UBERON:0006603,2.82e-09,120;UBERON:0004177,1.57e-08,29;UBERON:0005057,1.57e-08,29;UBERON:0002384,5.52e-08,46;UBERON:0004923,1.15e-07,24;UBERON:0000072,1.50e-07,27;UBERON:0003081,2.20e-07,87;UBERON:0003929,2.75e-07,55 | |||
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|phase1_expression=38.2755744580458,51.2993849229861,60.9698980781978,51.7213801334679,70.626297922435,61.7795720635754,58.6367727894769,101.620055548521,122.626976994102,99.7114882131692,98.6215496978909,103.783578852933,108.198861316522,89.4310716746343,60.9590864122663,64.9945608321341,69.9561878128147,117.351925513264,132.452542863144,119.677881807045,30.1903680036298,65.2341549389816,74.7031396937355,57.5972722056264,52.7641346454491,51.1066448062368,54.2760115160434,58.17723282519,59.2873068703887,71.8285869815803,43.4591800884397,13.9706748161119,15.3766196896143,0,48.8159237379654,56.3535447765289,48.5923067904438,215.543789829507,178.92579389595,196.321403990174,285.880503183073,285.51301271263,251.008852517106,49.3515526464263,53.0201350278061,38.1777244496298,23.4717403304412,27.4711697039363,26.3623419281366,30.9143539528111,48.5752883040008,34.5006154475932,119.796780725224,94.2970784614748,101.164233541882,57.6261136720521,79.9428297429131,68.5843882728998,12.7459370341547,11.1088105647127,13.3104594736298,35.5786758672589,35.5717918444456,48.5945847331955,63.2874472042864,51.1545682761192,32.0572118254693,14.6002956022191,23.7449212186414,21.8709620097339,22.2944459032465,15.7108041422092,17.2277461942259,19.7210186736076,24.6322860516867,21.1420320920305,13.2139057199266,15.4501679083077,11.8277030607307,12.924856197559,16.2848005612289,16.1483144872596,14.2383329490704,12.9435400307286,14.3630352910202,25.0434297652618,20.3591503542717,14.7255562201987,71.182621733193,56.0740975992349,80.0025988816631,49.044160987939,38.078394687634,27.5248627735287,25.9910566979068,37.6342585161762,32.3022166303029,73.796329676299,77.4162293716549,66.7811795824543,37.1826628210436,79.562415996877,81.5376767061266,106.660005473,77.5037926820146,74.7411603151541,67.740275631981,38.3657835856041,85.1905637199195,40.8215882428268,36.0849479673563,38.6671157456419,38.0515570472497,40.2429450275502,43.3902329330751,48.2559710705954,65.2594714818747,42.512210934454,70.7688441559899,41.4123135865367,48.1434510243658,35.8807687320064,46.5979403045305,9.36898550436951,13.6140359428746,47.2595552135894,67.575730221339,38.9936775145715,62.5185517199478,12.2828324311955,10.5225138648284,15.4554853098823,9.56033761057521,12.5300574091862,10.1816141834184,12.4925772562173,47.660822281948,52.9973694798996,46.7537103102298,42.0883711772948,28.8867383377202,26.2088399054159,34.3918667928217,29.5381442958002,25.309577684294,25.1102891758306,29.9845518591132,27.4225572983357,28.8861110530009,32.5262457888649,31.4952512253468,37.7016659775429,39.2046621408093,39.0042426504827,47.5356735102349,41.0010589646096,39.3239384895411,38.3448381600926,55.6960458815362,31.0688658803253,29.0812314376559,28.4498057108403,25.0949419720323,23.8084720414359,27.9223474326155,18.3701816352822,27.3638869427612,23.2363031310667,25.8358964364164,27.0876315730507,29.1847714365081,25.4387978120078,34.0302678701129,32.0753340837289,11.565947171027,14.097931895962,37.9981600431368,33.8496725329337,34.7659848372431,32.5131340604614,49.0985027637176,42.958590744772,39.8056698482318,45.2736990147891,50.3000805237182,44.4687177754829,51.7750530128555,48.5453791780408,52.2503753479242,59.3220809711786,52.0892700198013,51.1793072263724,45.3306283277865,38.8444942873078,43.9560169125014,34.6207257337034,36.6570200746813,32.1222055097659,38.7007607200455,27.455487524206,33.1267315745301,25.6666100957345,28.1629995732791,48.0513904462351,47.1741588271687,51.2685616237466,44.8320868268591,42.6883572761778,40.2308845814643,44.3052051674248,32.9134510353322,38.4385978463314,79.072513590045,43.5404908772149,38.6926714662055,37.6342528141196,29.6005732311155,34.7359335381624,69.0976931223101,37.7087909423265,38.4597344403181,39.8900951571692,43.6523861816614,51.0894085197538,52.845688276695,61.6622327230644,53.7535841402111,52.9300608260572,63.7819074629948,58.6630666682342,69.7647326738218,67.9850575333104,123.648852830203,122.37877885921,31.4729134732183,43.0461324235383,12.6834966090356,12.4244387787735,79.5084485076876,22.9748543755979,37.2299698911183,35.5299257309941,38.7762115919038,38.7129452683134,41.8861507274901,39.9137908412254,36.8377738524154,39.1622849601158,32.4135977916149,14.4594592389813,47.54992854477,33.6543990931112,45.2825747002941,46.1916344323099,23.8941249011933,34.4748503340074,30.5346792534399,24.7072654480227,20.6711325016541,31.0509499423367,39.2811005615696,30.5368332761105,22.8158322166222,25.9150141507369,28.4630243152497,25.7838858120467,15.6602218646742,34.0315467719176,29.1057038511198,28.935499729265,35.1133662611702,27.4687979107189,27.4796864405542,18.5723618959906,58.4332553078639,54.4408422120018,53.1473439312458,43.5299707765507,42.4651442210232,53.1356868617053,51.3301079213487,53.0175106176548,45.4710105142567,18.7279555030615,65.4435473455776,53.8669725384011,57.0399144298712,55.9454317303932,59.598683286367,73.6665717725003,62.7220406677326,55.4207751201686,63.4337879762305,32.4588010125139,37.0113112489928,38.22405981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| ||
|short_description=p1@Mob1a | |short_description=p1@Mob1a | ||
}} | }} |
Latest revision as of 19:11, 1 October 2015
Short description: | p1@Mob1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mob1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:586 |
Association with transcript: | 0bp_to_ENSMUST00000133045, NM_145571, uc009cnf.1, uc012eny.1_5end |
EntrezGene: | Mob1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.53e-08 | 12 |
connective tissue cell | 5.52e-08 | 46 |
mesenchymal cell | 5.52e-08 | 46 |
T cell | 1.09e-07 | 11 |
pro-T cell | 1.09e-07 | 11 |
lymphocyte | 1.27e-07 | 13 |
common lymphoid progenitor | 1.27e-07 | 13 |
hematopoietic cell | 2.18e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.18e-07 | 32 |
hematopoietic stem cell | 2.18e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.18e-07 | 32 |
hematopoietic lineage restricted progenitor cell | 3.49e-07 | 25 |
leukocyte | 6.19e-07 | 17 |
nongranular leukocyte | 6.19e-07 | 17 |
motile cell | 8.09e-07 | 54 |
mature alpha-beta T cell | 8.15e-07 | 9 |
alpha-beta T cell | 8.15e-07 | 9 |
immature T cell | 8.15e-07 | 9 |
mature T cell | 8.15e-07 | 9 |
immature alpha-beta T cell | 8.15e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 4.12e-18 | 118 |
endoderm | 4.12e-18 | 118 |
presumptive endoderm | 4.12e-18 | 118 |
digestive system | 2.24e-17 | 116 |
digestive tract | 2.24e-17 | 116 |
primitive gut | 2.24e-17 | 116 |
subdivision of digestive tract | 1.04e-16 | 114 |
hemolymphoid system | 5.70e-13 | 48 |
immune system | 5.70e-13 | 48 |
hematopoietic system | 7.34e-12 | 45 |
blood island | 7.34e-12 | 45 |
foregut | 1.72e-10 | 80 |
mixed endoderm/mesoderm-derived structure | 2.04e-10 | 35 |
respiratory system | 2.23e-10 | 42 |
respiratory tract | 3.17e-10 | 41 |
endo-epithelium | 4.44e-10 | 69 |
unilaminar epithelium | 6.84e-10 | 66 |
mesoderm | 2.82e-09 | 120 |
mesoderm-derived structure | 2.82e-09 | 120 |
presumptive mesoderm | 2.82e-09 | 120 |
hemopoietic organ | 1.57e-08 | 29 |
immune organ | 1.57e-08 | 29 |
connective tissue | 5.52e-08 | 46 |
organ component layer | 1.15e-07 | 24 |
segment of respiratory tract | 1.50e-07 | 27 |
lateral plate mesoderm | 2.20e-07 | 87 |
gut epithelium | 2.75e-07 | 55 |