FFCP PHASE1:Mm9::chr3:85775143..85775158,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=175 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-170bp_to_uc008pqy.1_5end | |association_with_transcript=-170bp_to_uc008pqy.1_5end | ||
|cluster_id=chr3:85775143..85775158,+ | |||
|description=CAGE_peak_2_at_uc008pqy.1_5end | |description=CAGE_peak_2_at_uc008pqy.1_5end | ||
|id=chr3:85775143..85775158,+ | |id=chr3:85775143..85775158,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.81e-09!25;CL:0000223!1.16e-07!20 | |ontology_enrichment_celltype=CL:0000066!1.81e-09!25;CL:0000223!1.16e-07!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.28e-13,25;CL:0000223,2.01e-11,20;CL:0002563,4.89e-09,9;CL:0002251,4.89e-09,9;CL:0002076,1.96e-07,15;CL:0000239,4.22e-07,6;CL:0000677,4.22e-07,6;CL:0000584,4.22e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.23e-13!43;UBERON:0005409!2.07e-11!59;UBERON:0001007!8.95e-10!128;UBERON:0001555!8.95e-10!128;UBERON:0007026!8.95e-10!128;UBERON:0004119!1.24e-09!130;UBERON:0000925!1.24e-09!130;UBERON:0006595!1.24e-09!130;UBERON:0000344!3.49e-09!15;UBERON:0004921!4.79e-09!126;UBERON:0004185!4.79e-09!126;UBERON:0001242!3.02e-08!13;UBERON:0000060!3.02e-08!13;UBERON:0001262!3.02e-08!13;UBERON:0004786!3.02e-08!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.82e-15,31;UBERON:0005409,5.71e-14,47;UBERON:0000344,4.10e-13,15;UBERON:0004119,7.12e-13,118;UBERON:0000925,7.12e-13,118;UBERON:0006595,7.12e-13,118;UBERON:0001007,8.55e-13,116;UBERON:0001555,8.55e-13,116;UBERON:0007026,8.55e-13,116;UBERON:0004921,9.88e-12,114;UBERON:0001242,1.08e-11,13;UBERON:0001262,1.08e-11,13;UBERON:0004786,1.08e-11,13;UBERON:0003350,4.89e-09,9;UBERON:0004808,4.89e-09,9;UBERON:0001277,4.89e-09,9;UBERON:0000485,4.50e-08,11;UBERON:0004923,4.15e-07,24 | |||
|phase1_expression=1.12104192973356,4.18770489167233,5.0049916332849,8.77146212789807,8.5152274090879,5.20425742926858,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.36069264241712,0,0,3.67982572424835,2.2940928106717,4.59385571292016,7.75371593086335,3.01659725760245,2.28028103347649,2.52030129759931,1.99557459589774,0,0,0,3.17736781726402,2.1610503896604,2.6542016314108,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0.917733760808408,0,0,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,1.90149421051854,0,0.889294796111139,0,0,0,0.599200221036809,0,0,0.405017814995072,0.210324961351382,0.285650984403804,1.32521124570968,0.122490799214954,0,0,1.10115880999389,1.40456071893706,0.614426133024974,0,0.182975287204819,0.52091337055676,0,0.56276261003168,0.30559649555362,1.47314292736834,1.28134512719193,0.186399445825301,0.37863096666592,0.226714680320357,1.15945795480671,4.30211938490693,5.439770669662,5.93673510801599,11.0461990966104,8.06448396775204,2.52799956237153,0.852151612890289,0.259786004602869,1.7666978725517,0.704217098883403,1.28326477414318,0,0,2.38140145112336,1.52015919285059,0.505524445014783,3.88225191044804,0.258937883647172,0,0,0.304465478312141,0.230615497256059,0,0.23517741427141,0.251333182659351,0.494389935468748,0.578397427679647,0,0.161766849947409,0,0,0,0.878342391034642,0.41889341362691,3.57639877292028,0,0,0,0.449371918214468,0.915001205637253,0.628271760564322,0.521472960576829,0,1.0389402227978,1.46017136760982,0.712875546952214,0.124406970610093,2.27450482590307,1.68353484709179,0,0.229902104433473,0.540186389416048,0.452114453507145,0.408218994907967,0.2562274405697,0.281105173679186,0.776110112217047,0.862271971731369,0,0.175951124163949,0.219195732427575,0.556094498451196,1.0447564995665,1.4404749548556,0,0,0,0,0,0,0.180062061461015,0,0,0,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0,0,0.308713837137853,7.93005079161115,3.43785736662608,0.853153002140936,0,0.515469845288373,1.61346819698674,0.889512175379481,1.14135375667535,4.74529061544512,3.12928013975621,2.01068167040216,2.38747766449381,4.09424582950152,1.79763881730844,2.59365659849633,3.58454291857861,0.189667900953082,0.456994050438915,0,1.01825663922657,0.969762435838129,1.05203729835478,0.822074982615345,3.09981310757165,3.1399745568275,2.59134044235781,8.00422093135302,0.333690211432188,0.196558995113203,0.674586337154561,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.972811360650212,0,1.43768206527355,0.372140947668503,1.5601883655728,5.30415643688935,4.12614051100398,8.20153986317724,1.84753190166605,0,0.162964976442026,0.509235257325564,0,0.502518772325447,0.714130922658041,1.56106918286239,0.315270288212382,0.221464689648775,0.478364305972461,2.29408640602033,0.690739927463582,1.01254341007058,0,0,0.983528546038072,0.827810238914197,0.160550589987792,0.35163505977661,0.819674726883377,0,0.94652465824877,0,0,0.477937595905104,0.445597348164788,0,0,0,0,0.642642632843614,1.41940085208269,0.178065603667255,0.325773918707152,1.15479086080775,3.98235415019888,0.485561272309963,0.302323556964751,0.754420319023592,1.77181135728464,1.53717573971964,0.516856586336442,1.09060118843252,0.356497378384721,2.84433082142234,2.10837217149998,3.09406629744561,1.02131881726136,0.18006109403131,0.388076051348264,0.214337035031592,0.354680467284547,0.535106452806212,0.164549020602121,0,1.17335854031855,0,0.882113592219848,7.91454014119104,2.09903754704677,1.74907482291652,2.02932984805332,3.28281799490123,2.04036585640896,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.813277868507395,1.08005340821801,2.71814784818809,2.62035076495413,2.42755823492677,2.72756403893609,2.6175594198403,3.24037433229482,5.59205381778233,0,0.448549638131936,0,0.388902376688095,0.129159823477731,0.337912250981556,1.17357238645754,0.5208175393758,1.15345278868282,0.966336483304024,0.288030006257865,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0,4.98806843953465,0.665957860122194,0.179427713218951,0.503653849092235,4.056981474676,1.50145980360946,2.38097111547445,11.7902608493486,1.50471631210609,0,0.920650473014354,1.14579102687879,0.515559547031063,1.37016503954128,0,0,0.45032120322422,0,0,0.103787347584177,0.798049746802062,0,0.972426868273176,0.628839487883947,0.735374033800057,1.11123363900808,0.206035057238894,0.64183841918363,0.758091635291392,0.25347929989024,0,1.03005658216871,0.704276676453562,0.631790158511746,0.476293691283074,0.463537303779422,0.578727661391115,0,0.441596760403192,1.02860775715625,0.70990322463735,0.953744759789284,1.0174249164263,0.658765662907314,0.592302255241736,0.548783918618318,0.526139422875686,0.679020569229309,0,0.355905054372522,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,0,0.935726433781634,1.07435527024149,0.57386499620653,0,0 | |phase1_expression=1.12104192973356,4.18770489167233,5.0049916332849,8.77146212789807,8.5152274090879,5.20425742926858,3.03696432774183,0,0,0,0,0,0,0,0,0,0,0,0.137114433605739,0,1.36069264241712,0,0,3.67982572424835,2.2940928106717,4.59385571292016,7.75371593086335,3.01659725760245,2.28028103347649,2.52030129759931,1.99557459589774,0,0,0,3.17736781726402,2.1610503896604,2.6542016314108,0,0,0,0,0,0,0.629484089877886,0.506884656097573,0.917733760808408,0,0,0.219686182734472,0.194429899074283,0.419959264876088,0,0,0,0,0.257259436035947,0.286533439938757,0,0,0,1.90149421051854,0,0.889294796111139,0,0,0,0.599200221036809,0,0,0.405017814995072,0.210324961351382,0.285650984403804,1.32521124570968,0.122490799214954,0,0,1.10115880999389,1.40456071893706,0.614426133024974,0,0.182975287204819,0.52091337055676,0,0.56276261003168,0.30559649555362,1.47314292736834,1.28134512719193,0.186399445825301,0.37863096666592,0.226714680320357,1.15945795480671,4.30211938490693,5.439770669662,5.93673510801599,11.0461990966104,8.06448396775204,2.52799956237153,0.852151612890289,0.259786004602869,1.7666978725517,0.704217098883403,1.28326477414318,0,0,2.38140145112336,1.52015919285059,0.505524445014783,3.88225191044804,0.258937883647172,0,0,0.304465478312141,0.230615497256059,0,0.23517741427141,0.251333182659351,0.494389935468748,0.578397427679647,0,0.161766849947409,0,0,0,0.878342391034642,0.41889341362691,3.57639877292028,0,0,0,0.449371918214468,0.915001205637253,0.628271760564322,0.521472960576829,0,1.0389402227978,1.46017136760982,0.712875546952214,0.124406970610093,2.27450482590307,1.68353484709179,0,0.229902104433473,0.540186389416048,0.452114453507145,0.408218994907967,0.2562274405697,0.281105173679186,0.776110112217047,0.862271971731369,0,0.175951124163949,0.219195732427575,0.556094498451196,1.0447564995665,1.4404749548556,0,0,0,0,0,0,0.180062061461015,0,0,0,0.465067889500816,0,0.116765342367169,0,0.164167464079095,0,0.146199987425332,0,0,0,0.308713837137853,7.93005079161115,3.43785736662608,0.853153002140936,0,0.515469845288373,1.61346819698674,0.889512175379481,1.14135375667535,4.74529061544512,3.12928013975621,2.01068167040216,2.38747766449381,4.09424582950152,1.79763881730844,2.59365659849633,3.58454291857861,0.189667900953082,0.456994050438915,0,1.01825663922657,0.969762435838129,1.05203729835478,0.822074982615345,3.09981310757165,3.1399745568275,2.59134044235781,8.00422093135302,0.333690211432188,0.196558995113203,0.674586337154561,0.202860121388503,0.241177159752417,0.25462585178142,0.287696137450811,0.972811360650212,0,1.43768206527355,0.372140947668503,1.5601883655728,5.30415643688935,4.12614051100398,8.20153986317724,1.84753190166605,0,0.162964976442026,0.509235257325564,0,0.502518772325447,0.714130922658041,1.56106918286239,0.315270288212382,0.221464689648775,0.478364305972461,2.29408640602033,0.690739927463582,1.01254341007058,0,0,0.983528546038072,0.827810238914197,0.160550589987792,0.35163505977661,0.819674726883377,0,0.94652465824877,0,0,0.477937595905104,0.445597348164788,0,0,0,0,0.642642632843614,1.41940085208269,0.178065603667255,0.325773918707152,1.15479086080775,3.98235415019888,0.485561272309963,0.302323556964751,0.754420319023592,1.77181135728464,1.53717573971964,0.516856586336442,1.09060118843252,0.356497378384721,2.84433082142234,2.10837217149998,3.09406629744561,1.02131881726136,0.18006109403131,0.388076051348264,0.214337035031592,0.354680467284547,0.535106452806212,0.164549020602121,0,1.17335854031855,0,0.882113592219848,7.91454014119104,2.09903754704677,1.74907482291652,2.02932984805332,3.28281799490123,2.04036585640896,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.813277868507395,1.08005340821801,2.71814784818809,2.62035076495413,2.42755823492677,2.72756403893609,2.6175594198403,3.24037433229482,5.59205381778233,0,0.448549638131936,0,0.388902376688095,0.129159823477731,0.337912250981556,1.17357238645754,0.5208175393758,1.15345278868282,0.966336483304024,0.288030006257865,0,0.405450430580328,0,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.292373642219257,0.0962118416403295,0,4.98806843953465,0.665957860122194,0.179427713218951,0.503653849092235,4.056981474676,1.50145980360946,2.38097111547445,11.7902608493486,1.50471631210609,0,0.920650473014354,1.14579102687879,0.515559547031063,1.37016503954128,0,0,0.45032120322422,0,0,0.103787347584177,0.798049746802062,0,0.972426868273176,0.628839487883947,0.735374033800057,1.11123363900808,0.206035057238894,0.64183841918363,0.758091635291392,0.25347929989024,0,1.03005658216871,0.704276676453562,0.631790158511746,0.476293691283074,0.463537303779422,0.578727661391115,0,0.441596760403192,1.02860775715625,0.70990322463735,0.953744759789284,1.0174249164263,0.658765662907314,0.592302255241736,0.548783918618318,0.526139422875686,0.679020569229309,0,0.355905054372522,0.492522411877817,0.409231043169689,0.464810523557898,0.192906610981141,0,0.935726433781634,1.07435527024149,0.57386499620653,0,0 | ||
|short_description=p2@uc008pqy.1 | |short_description=p2@uc008pqy.1 | ||
}} | }} |
Latest revision as of 02:35, 4 August 2015
Short description: | p2@uc008pqy.1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_uc008pqy.1_5end |
Coexpression cluster: | MCL_coexpression_mm9:175 |
Association with transcript: | -170bp_to_uc008pqy.1_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.28e-13 | 25 |
endodermal cell | 2.01e-11 | 20 |
intestinal epithelial cell | 4.89e-09 | 9 |
epithelial cell of alimentary canal | 4.89e-09 | 9 |
endo-epithelial cell | 1.96e-07 | 15 |
brush border epithelial cell | 4.22e-07 | 6 |
gut absorptive cell | 4.22e-07 | 6 |
enterocyte | 4.22e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.82e-15 | 31 |
gastrointestinal system | 5.71e-14 | 47 |
mucosa | 4.10e-13 | 15 |
endoderm-derived structure | 7.12e-13 | 118 |
endoderm | 7.12e-13 | 118 |
presumptive endoderm | 7.12e-13 | 118 |
digestive system | 8.55e-13 | 116 |
digestive tract | 8.55e-13 | 116 |
primitive gut | 8.55e-13 | 116 |
subdivision of digestive tract | 9.88e-12 | 114 |
intestinal mucosa | 1.08e-11 | 13 |
wall of intestine | 1.08e-11 | 13 |
gastrointestinal system mucosa | 1.08e-11 | 13 |
epithelium of mucosa | 4.89e-09 | 9 |
gastrointestinal system epithelium | 4.89e-09 | 9 |
intestinal epithelium | 4.89e-09 | 9 |
simple columnar epithelium | 4.50e-08 | 11 |
organ component layer | 4.15e-07 | 24 |