FFCP PHASE1:Mm9::chr3:115591057..115591118,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=69740 | |EntrezGene=69740 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q6PAC5,Q8BG20 | |UniProt=Q6PAC5,Q8BG20 | ||
|association_with_transcript=0bp_to_ENSMUST00000043342,ENSMUST00000106505,ENSMUST00000150064,NM_027193,uc008rbr.1,uc008rbs.1_5end | |association_with_transcript=0bp_to_ENSMUST00000043342,ENSMUST00000106505,ENSMUST00000150064,NM_027193,uc008rbr.1,uc008rbs.1_5end | ||
|cluster_id=chr3:115591057..115591118,+ | |||
|description=CAGE_peak_1_at_Dph5_5end | |description=CAGE_peak_1_at_Dph5_5end | ||
|id=chr3:115591057..115591118,+ | |id=chr3:115591057..115591118,+ | ||
|ontology_enrichment_celltype=CL:0000988!8.67e-09!32;CL:0002032!8.67e-09!32;CL:0000037!8.67e-09!32;CL:0000566!8.67e-09!32;CL:0000837!8.67e-09!32;CL:0000838!1.42e-08!12;CL:0000542!2.93e-08!13;CL:0000051!2.93e-08!13;CL:0000084!4.34e-08!11;CL:0000827!4.34e-08!11;CL:0002031!3.33e-07!25;CL:0000791!3.81e-07!9;CL:0000789!3.81e-07!9;CL:0002420!3.81e-07!9;CL:0002419!3.81e-07!9;CL:0000790!3.81e-07!9 | |ontology_enrichment_celltype=CL:0000988!8.67e-09!32;CL:0002032!8.67e-09!32;CL:0000037!8.67e-09!32;CL:0000566!8.67e-09!32;CL:0000837!8.67e-09!32;CL:0000838!1.42e-08!12;CL:0000542!2.93e-08!13;CL:0000051!2.93e-08!13;CL:0000084!4.34e-08!11;CL:0000827!4.34e-08!11;CL:0002031!3.33e-07!25;CL:0000791!3.81e-07!9;CL:0000789!3.81e-07!9;CL:0002420!3.81e-07!9;CL:0002419!3.81e-07!9;CL:0000790!3.81e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.59e-09,32;CL:0002032,8.59e-09,32;CL:0000037,8.59e-09,32;CL:0000837,8.59e-09,32;CL:0000838,1.42e-08,12;CL:0000542,2.93e-08,13;CL:0000051,2.93e-08,13;CL:0000084,4.34e-08,11;CL:0000827,4.34e-08,11;CL:0002031,3.29e-07,25;CL:0000791,3.81e-07,9;CL:0000789,3.81e-07,9;CL:0002420,3.81e-07,9;CL:0002419,3.81e-07,9;CL:0000790,3.81e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!4.26e-10!29;UBERON:0005057!5.83e-10!51;UBERON:0002405!3.24e-09!70;UBERON:0000077!4.84e-09!97;UBERON:0006562!9.46e-09!24;UBERON:0001557!9.46e-09!24;UBERON:0001042!9.46e-09!24;UBERON:0008814!9.46e-09!24;UBERON:0009145!9.46e-09!24;UBERON:0002370!1.34e-08!23;UBERON:0000974!1.34e-08!23;UBERON:0004807!1.34e-08!23;UBERON:0005058!1.34e-08!23;UBERON:0003351!1.34e-08!23;UBERON:0009113!1.34e-08!23;UBERON:0003295!1.34e-08!23;UBERON:0009722!1.34e-08!23;UBERON:0005562!1.34e-08!23;UBERON:0007690!1.34e-08!23;UBERON:0000072!1.47e-08!27;UBERON:0001041!2.31e-08!92;UBERON:0003408!2.40e-08!24;UBERON:0002390!2.69e-08!45;UBERON:0003061!2.69e-08!45;UBERON:0002193!2.75e-08!48;UBERON:0003929!3.97e-07!55;UBERON:0000949!5.81e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,4.22e-10,29;UBERON:0005057,4.22e-10,29;UBERON:0000077,1.40e-09,35;UBERON:0006562,9.36e-09,24;UBERON:0001557,9.36e-09,24;UBERON:0001042,9.36e-09,24;UBERON:0008814,9.36e-09,24;UBERON:0009145,9.36e-09,24;UBERON:0002370,1.33e-08,23;UBERON:0000974,1.33e-08,23;UBERON:0004807,1.33e-08,23;UBERON:0005058,1.33e-08,23;UBERON:0003351,1.33e-08,23;UBERON:0009113,1.33e-08,23;UBERON:0003295,1.33e-08,23;UBERON:0009722,1.33e-08,23;UBERON:0005562,1.33e-08,23;UBERON:0007690,1.33e-08,23;UBERON:0000072,1.45e-08,27;UBERON:0003408,2.38e-08,24;UBERON:0002390,2.67e-08,45;UBERON:0003061,2.67e-08,45;UBERON:0002193,2.73e-08,48;UBERON:0002405,2.73e-08,48;UBERON:0007811,9.42e-08,36;UBERON:0003929,3.95e-07,55;UBERON:0000949,5.78e-07,72;UBERON:0001041,8.33e-07,80 | |||
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| ||
|short_description=p1@Dph5 | |short_description=p1@Dph5 | ||
}} | }} |
Latest revision as of 11:42, 1 October 2015
Short description: | p1@Dph5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dph5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000043342, ENSMUST00000106505, ENSMUST00000150064, NM_027193, uc008rbr.1, uc008rbs.1_5end |
EntrezGene: | Dph5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 8.59e-09 | 32 |
hematopoietic oligopotent progenitor cell | 8.59e-09 | 32 |
hematopoietic stem cell | 8.59e-09 | 32 |
hematopoietic multipotent progenitor cell | 8.59e-09 | 32 |
lymphoid lineage restricted progenitor cell | 1.42e-08 | 12 |
lymphocyte | 2.93e-08 | 13 |
common lymphoid progenitor | 2.93e-08 | 13 |
T cell | 4.34e-08 | 11 |
pro-T cell | 4.34e-08 | 11 |
hematopoietic lineage restricted progenitor cell | 3.29e-07 | 25 |
mature alpha-beta T cell | 3.81e-07 | 9 |
alpha-beta T cell | 3.81e-07 | 9 |
immature T cell | 3.81e-07 | 9 |
mature T cell | 3.81e-07 | 9 |
immature alpha-beta T cell | 3.81e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 4.22e-10 | 29 |
immune organ | 4.22e-10 | 29 |
mixed endoderm/mesoderm-derived structure | 1.40e-09 | 35 |
pharynx | 9.36e-09 | 24 |
upper respiratory tract | 9.36e-09 | 24 |
chordate pharynx | 9.36e-09 | 24 |
pharyngeal arch system | 9.36e-09 | 24 |
pharyngeal region of foregut | 9.36e-09 | 24 |
thymus | 1.33e-08 | 23 |
neck | 1.33e-08 | 23 |
respiratory system epithelium | 1.33e-08 | 23 |
hemolymphoid system gland | 1.33e-08 | 23 |
pharyngeal epithelium | 1.33e-08 | 23 |
thymic region | 1.33e-08 | 23 |
pharyngeal gland | 1.33e-08 | 23 |
entire pharyngeal arch endoderm | 1.33e-08 | 23 |
thymus primordium | 1.33e-08 | 23 |
early pharyngeal endoderm | 1.33e-08 | 23 |
segment of respiratory tract | 1.45e-08 | 27 |
gland of gut | 2.38e-08 | 24 |
hematopoietic system | 2.67e-08 | 45 |
blood island | 2.67e-08 | 45 |
hemolymphoid system | 2.73e-08 | 48 |
immune system | 2.73e-08 | 48 |
craniocervical region | 9.42e-08 | 36 |
gut epithelium | 3.95e-07 | 55 |
endocrine system | 5.78e-07 | 72 |
foregut | 8.33e-07 | 80 |