FFCP PHASE1:Mm9::chr11:96160119..96160135,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=15414 | |EntrezGene=15414 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=249 | |||
|TSSclassifier=NA | |||
|UniProt=P09023 | |UniProt=P09023 | ||
|association_with_transcript=-133bp_to_ENSMUST00000000704_5end | |association_with_transcript=-133bp_to_ENSMUST00000000704_5end | ||
|cluster_id=chr11:96160119..96160135,+ | |||
|description=CAGE_peak_7_at_Hoxb6_5end | |description=CAGE_peak_7_at_Hoxb6_5end | ||
|id=chr11:96160119..96160135,+ | |id=chr11:96160119..96160135,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002612,2.57e-20,3;CL:0002611,3.36e-14,2;CL:0000540,4.33e-09,33;CL:0000047,4.33e-09,33;CL:0000031,4.33e-09,33;CL:0000404,4.33e-09,33;CL:0000393,1.35e-07,39;CL:0000211,1.35e-07,39;CL:0000117,4.19e-07,23;CL:0000337,4.19e-07,23;CL:0002319,7.86e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!6.02e-15!21;UBERON:0002342!1.76e-11!10;UBERON:0005062!1.76e-11!10;UBERON:0003064!1.79e-10!14;UBERON:0002240!1.23e-09!6;UBERON:0005174!1.23e-09!6;UBERON:0001137!1.23e-09!6;UBERON:0001948!2.46e-08!5;UBERON:0002315!2.46e-08!5;UBERON:0002369!8.05e-08!7;UBERON:0006858!8.05e-08!7;UBERON:0006554!3.72e-07!16;UBERON:0002113!3.74e-07!14;UBERON:0003918!3.74e-07!14;UBERON:0005095!3.74e-07!14;UBERON:0007687!3.74e-07!14;UBERON:0003076!4.19e-07!12;UBERON:0003057!4.19e-07!12 | |ontology_enrichment_uberon=UBERON:0000489!6.02e-15!21;UBERON:0002342!1.76e-11!10;UBERON:0005062!1.76e-11!10;UBERON:0003064!1.79e-10!14;UBERON:0002240!1.23e-09!6;UBERON:0005174!1.23e-09!6;UBERON:0001137!1.23e-09!6;UBERON:0001948!2.46e-08!5;UBERON:0002315!2.46e-08!5;UBERON:0002369!8.05e-08!7;UBERON:0006858!8.05e-08!7;UBERON:0006554!3.72e-07!16;UBERON:0002113!3.74e-07!14;UBERON:0003918!3.74e-07!14;UBERON:0005095!3.74e-07!14;UBERON:0007687!3.74e-07!14;UBERON:0003076!4.19e-07!12;UBERON:0003057!4.19e-07!12 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,7.02e-39,6;UBERON:0005174,7.02e-39,6;UBERON:0001137,7.02e-39,6;UBERON:0001948,7.66e-33,5;UBERON:0002315,7.66e-33,5;UBERON:0002257,2.57e-20,3;UBERON:0003076,2.37e-19,12;UBERON:0003057,2.37e-19,12;UBERON:0000489,5.68e-19,21;UBERON:0002256,3.36e-14,2;UBERON:0010313,2.90e-09,3;UBERON:0002342,2.90e-09,3;UBERON:0002005,2.90e-09,3;UBERON:0005428,2.90e-09,3;UBERON:0005062,2.90e-09,3;UBERON:0003103,7.10e-09,43;UBERON:0003064,2.75e-07,14;UBERON:0000998,3.16e-07,1;UBERON:0007194,3.16e-07,1;UBERON:0006868,3.16e-07,1;UBERON:0000080,3.67e-07,4;UBERON:0005904,3.67e-07,4;UBERON:0006947,3.67e-07,4;UBERON:0002120,3.67e-07,4;UBERON:0004054,3.67e-07,4;UBERON:0004875,3.67e-07,4;UBERON:0004876,3.67e-07,4;UBERON:0005721,3.67e-07,4;UBERON:0005754,3.67e-07,4;UBERON:0007297,3.67e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.608261587317087,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99911378165325,7.50953039235486,0,0,0,0,0,0,0,0,0,0,0,0,2.94628585473668,5.26775218956681,6.52398060388552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1875371125186,0.173485326766136,0.304465478312141,0.461230994512117,0.452167921657868,0.117588707135705,1.0053327306374,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.622034853050465,5.05445516867349,0,0,0,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.696710015581316,0.38660238396628,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0.569003702859245,0.799739588268102,0,0.814605311381257,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0,1.26203287766503,0.780877488593277,1.72338718186239,0,0,0,0.809621403349789,0,0.395287777946524,0,0,0.35613120733451,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0.21183207086382,0,1.31909002353184,0,0.663442174209714,0.596861720015682,0.164140899745061,0,2.22510362412612,0,0.412773735926445,0,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0,0,0.280924522409647,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,0.608261587317087,0.550640256485045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99911378165325,7.50953039235486,0,0,0,0,0,0,0,0,0,0,0,0,2.94628585473668,5.26775218956681,6.52398060388552,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1875371125186,0.173485326766136,0.304465478312141,0.461230994512117,0.452167921657868,0.117588707135705,1.0053327306374,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.622034853050465,5.05445516867349,0,0,0,0,0,0,0,0,0,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426576501070468,0.696710015581316,0.38660238396628,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0.569003702859245,0.799739588268102,0,0.814605311381257,0.387904974335251,0.140271639780637,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568474235311454,0,0.339490171550376,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0.642202359951168,0.586058432961016,0,0,1.26203287766503,0.780877488593277,1.72338718186239,0,0,0,0.809621403349789,0,0.395287777946524,0,0,0.35613120733451,0,0.329940245945071,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0.21183207086382,0,1.31909002353184,0,0.663442174209714,0.596861720015682,0.164140899745061,0,2.22510362412612,0,0.412773735926445,0,0,0,0,0,0,0,0,1.10717597753397,0.406638934253697,0.216010681643603,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0.183151624267265,0,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0.206035057238894,0,0.505394423527595,0,0,0.280924522409647,0.0640251524048693,0.114870937911227,0,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0.0941093804153306,0,0,0,0,0.561142271657738,0,0.0985044823755635,0.818462086339379,0.154936841185966,0.192906610981141,0,0,0,0,0.220591419119515,0 | ||
|short_description=p7@Hoxb6 | |short_description=p7@Hoxb6 | ||
}} | }} |
Latest revision as of 01:24, 26 September 2015
Short description: | p7@Hoxb6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Hoxb6_5end |
Coexpression cluster: | MCL_coexpression_mm9:249 |
Association with transcript: | -133bp_to_ENSMUST00000000704_5end |
EntrezGene: | Hoxb6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the ventral spinal cord | 2.57e-20 | 3 |
neuron of the dorsal spinal cord | 3.36e-14 | 2 |
neuron | 4.33e-09 | 33 |
neuronal stem cell | 4.33e-09 | 33 |
neuroblast | 4.33e-09 | 33 |
electrically signaling cell | 4.33e-09 | 33 |
electrically responsive cell | 1.35e-07 | 39 |
electrically active cell | 1.35e-07 | 39 |
CNS neuron (sensu Vertebrata) | 4.19e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.19e-07 | 23 |
neural cell | 7.86e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 7.02e-39 | 6 |
dorsal region element | 7.02e-39 | 6 |
dorsum | 7.02e-39 | 6 |
regional part of spinal cord | 7.66e-33 | 5 |
gray matter of spinal cord | 7.66e-33 | 5 |
ventral horn of spinal cord | 2.57e-20 | 3 |
posterior neural tube | 2.37e-19 | 12 |
chordal neural plate | 2.37e-19 | 12 |
cavitated compound organ | 5.68e-19 | 21 |
dorsal horn of spinal cord | 3.36e-14 | 2 |
neural crest-derived structure | 2.90e-09 | 3 |
neural crest | 2.90e-09 | 3 |
enteric nervous system | 2.90e-09 | 3 |
vagal neural crest | 2.90e-09 | 3 |
neural fold | 2.90e-09 | 3 |
compound organ | 7.10e-09 | 43 |
intermediate mesoderm | 2.75e-07 | 14 |
seminal vesicle | 3.16e-07 | 1 |
vesicular gland | 3.16e-07 | 1 |
seminal fluid secreting gland | 3.16e-07 | 1 |
mesonephros | 3.67e-07 | 4 |
duct of male reproductive system | 3.67e-07 | 4 |
male genital duct | 3.67e-07 | 4 |
pronephros | 3.67e-07 | 4 |
internal male genitalia | 3.67e-07 | 4 |
nephrogenic cord | 3.67e-07 | 4 |
urogenital ridge | 3.67e-07 | 4 |
pronephric mesoderm | 3.67e-07 | 4 |
rostral part of nephrogenic cord | 3.67e-07 | 4 |
presumptive pronephric mesoderm | 3.67e-07 | 4 |