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FFCP PHASE1:Mm9::chr5:104182943..104182954,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=17355
|EntrezGene=17355
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=A3KMF4,Q3UP77,Q3UQD9
|UniProt=A3KMF4,Q3UP77,Q3UQD9
|association_with_transcript=-226bp_to_ENSMUST00000054979,NM_133919,uc008yjt.1_5end
|association_with_transcript=-226bp_to_ENSMUST00000054979,NM_133919,uc008yjt.1_5end
|cluster_id=chr5:104182943..104182954,+
|description=CAGE_peak_12_at_Aff1_5end
|description=CAGE_peak_12_at_Aff1_5end
|id=chr5:104182943..104182954,+
|id=chr5:104182943..104182954,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000838,1.11e-09,12;CL:0000791,1.81e-09,9;CL:0000789,1.81e-09,9;CL:0002420,1.81e-09,9;CL:0002419,1.81e-09,9;CL:0000790,1.81e-09,9;CL:0000542,6.93e-09,13;CL:0000051,6.93e-09,13;CL:0000084,1.10e-07,11;CL:0000827,1.10e-07,11;CL:0002031,1.74e-07,25;CL:0000624,4.38e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003081!1.16e-08!88;UBERON:0003408!1.24e-08!24;UBERON:0006562!2.09e-08!24;UBERON:0001557!2.09e-08!24;UBERON:0001042!2.09e-08!24;UBERON:0008814!2.09e-08!24;UBERON:0009145!2.09e-08!24;UBERON:0002370!2.78e-08!23;UBERON:0000974!2.78e-08!23;UBERON:0004807!2.78e-08!23;UBERON:0005058!2.78e-08!23;UBERON:0003351!2.78e-08!23;UBERON:0009113!2.78e-08!23;UBERON:0003295!2.78e-08!23;UBERON:0009722!2.78e-08!23;UBERON:0005562!2.78e-08!23;UBERON:0007690!2.78e-08!23;UBERON:0004177!3.66e-08!29
|ontology_enrichment_uberon_v019_2=UBERON:0002370,2.47e-21,23;UBERON:0000974,2.47e-21,23;UBERON:0004807,2.47e-21,23;UBERON:0005058,2.47e-21,23;UBERON:0003351,2.47e-21,23;UBERON:0009113,2.47e-21,23;UBERON:0003295,2.47e-21,23;UBERON:0009722,2.47e-21,23;UBERON:0005562,2.47e-21,23;UBERON:0007690,2.47e-21,23;UBERON:0006562,2.45e-20,24;UBERON:0003408,2.45e-20,24;UBERON:0001557,2.45e-20,24;UBERON:0001042,2.45e-20,24;UBERON:0008814,2.45e-20,24;UBERON:0009145,2.45e-20,24;UBERON:0000072,8.58e-18,27;UBERON:0004177,2.18e-16,29;UBERON:0005057,2.18e-16,29;UBERON:0002193,2.87e-14,48;UBERON:0002405,2.87e-14,48;UBERON:0002390,2.67e-13,45;UBERON:0003061,2.67e-13,45;UBERON:0000077,3.86e-13,35;UBERON:0007811,1.05e-12,36;UBERON:0000065,7.65e-11,41;UBERON:0001004,1.59e-10,42;UBERON:0003929,2.14e-10,55;UBERON:0000153,3.21e-10,43;UBERON:0000490,2.10e-09,66;UBERON:0002530,3.66e-08,65;UBERON:0002368,7.57e-08,60;UBERON:0005911,1.12e-07,69;UBERON:0003081,2.89e-07,87
|phase1_expression=0.640595388419176,2.09385244583617,0.454999239389536,0.60492842261366,0,0.503637815735669,0.700837921786577,0.903863264091034,1.97104211012333,1.63845168425395,0.856089841127525,0.398860794976682,0.856003649656029,1.31130603628496,0.333109761815663,0.404950534779652,1.39912375625629,0.630924330716475,1.64537320326887,0.42438965179803,0.510259740906419,0.0992909512008853,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0.408338712524738,0.837063261473815,0,1.0470474879476,1.76469446409304,0,0.485510353031154,0.377690453926732,0,0.183546752161682,0,0.436050312760893,0,0.777719596297134,0.279972843250725,0,1.17447824240415,2.17608642603403,1.68046899571232,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.270011876663381,0,0,0,0.244981598429908,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0,0,0.37863096666592,0.377857800533928,0.579728977403356,0,0,0.539703191637817,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0,0,0.45673551887624,1.8125651855302,0.29688427812965,0.346970653532272,0,0.230615497256059,0,0.470354828542819,0.251333182659351,0.247194967734374,0.578397427679647,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,0,0.41889341362691,0.255457055208591,0.599075622529601,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0.347648640384553,0.255715457330331,0,0.324482526135515,0.509196819251581,0.497627882440372,1.0108910337347,0.631325567659422,0.260240885925407,0.229902104433473,0.360124259610698,0.452114453507145,0.544291993210623,0.512454881139399,0.281105173679186,0.517406741478031,0,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0.257347907114715,0.568326998791185,0.621377317606506,0.234526059981096,0.36012412292203,0.473489471170421,0.393528463494808,0.462801338662135,0.697601834251224,0.536546802799238,0.467061369468678,0.493679549740441,0.656669856316381,0.486412857275134,0.730999937126662,0,0.402619256281115,0.210289948564127,0.102904612379284,0.330418782983798,0.528901133327089,0.426576501070468,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0.494096864172033,0,0.198956472041151,0.779856348476481,0.898819408654221,0,0,0,0.571242563048644,0,0.407302655690628,0.387904974335251,0.420814919341911,0.252946148497029,0.147610147979602,0.470996183524124,0.493588655687202,0.296452627087149,0.500535317148282,0.196558995113203,0.449724224769707,0.405720242777006,0.72353147925725,1.52775511068852,0.575392274901621,0.324270453550071,0.274561413188081,0,0,0,0,0.358794827043824,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0.585400943573396,0.315270288212382,0,0.318909537314974,0.327726629431476,0,0.289298117163023,0,0,0,0,0.160550589987792,0.234423373184406,0.327869890753351,0.252470927204373,0.631016438832513,0.780877488593277,0.430846795465598,0.477937595905104,0.445597348164788,1.13230612315533,0,0.584511715822624,0.790575555893047,0.321321316421807,0.425820255624806,0.178065603667255,0.325773918707152,1.15479086080775,0,0.485561272309963,0,0.188605079755898,0,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0.8244312647074,0.645857706783622,0.361877549568935,0.119372344003136,0.164140899745061,0.874442509889552,0,0.341741761595705,0,0.555583582109135,0.376736914009382,0.683471138605126,0.457556346413045,0.679913719975421,0.69975726161829,1.38199973804424,0,0.316335993581135,0.609958401380546,0.216010681643603,0,0,0.404593039154462,0.41326727862668,0,0.388844919875379,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0.5208175393758,0.209718688851422,0,0.288030006257865,1.89606672376907,0,0.308132871494482,0.649604114888975,0.716106782669926,0.993406773906324,1.32214994471966,1.18151621739662,1.00966449948148,1.5241361331,1.61321896218945,1.16949456887703,1.6356013078856,1.28564592399726,0.453460767230423,0.221985953374065,0.358855426437903,0,0.579568782096571,0.187682475451182,0.73260649706906,0.428736758158132,1.00314420807073,0,0,0,0,0,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0.367687016900028,0,0.618105171716683,0,0,0.25347929989024,0.377252682772152,0.468207537349412,0.384150914429216,0.229741875822453,0,0.347652977834566,0.578727661391115,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.290692833264657,0.376437521661322,0.25384382367503,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0.689531376628944,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.765153328275374,0.441182838239031,0.231867835620421
|phase1_expression=0.640595388419176,2.09385244583617,0.454999239389536,0.60492842261366,0,0.503637815735669,0.700837921786577,0.903863264091034,1.97104211012333,1.63845168425395,0.856089841127525,0.398860794976682,0.856003649656029,1.31130603628496,0.333109761815663,0.404950534779652,1.39912375625629,0.630924330716475,1.64537320326887,0.42438965179803,0.510259740906419,0.0992909512008853,0,0.159992422793407,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0.408338712524738,0.837063261473815,0,1.0470474879476,1.76469446409304,0,0.485510353031154,0.377690453926732,0,0.183546752161682,0,0.436050312760893,0,0.777719596297134,0.279972843250725,0,1.17447824240415,2.17608642603403,1.68046899571232,0,0,0.515672092277442,0.202316460859598,0,0,0,0,0,0,0,0,0.384218305321555,0.207379224616955,0.270011876663381,0,0,0,0.244981598429908,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0.294628585473668,0,0,0.37863096666592,0.377857800533928,0.579728977403356,0,0,0.539703191637817,0,0,0.140444420131752,0.170430322578058,0.259786004602869,0.35333957451034,0.281686839553361,1.28326477414318,0,0,0.216491041011214,0,0,0.45673551887624,1.8125651855302,0.29688427812965,0.346970653532272,0,0.230615497256059,0,0.470354828542819,0.251333182659351,0.247194967734374,0.578397427679647,0.884610551949874,0.485300549842228,0.220841518460394,0.969750506270444,0,0,0.41889341362691,0.255457055208591,0.599075622529601,0.599902730993408,0.127070227073065,0,0,0.125654352112864,0.347648640384553,0.255715457330331,0,0.324482526135515,0.509196819251581,0.497627882440372,1.0108910337347,0.631325567659422,0.260240885925407,0.229902104433473,0.360124259610698,0.452114453507145,0.544291993210623,0.512454881139399,0.281105173679186,0.517406741478031,0,0.567318240503458,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0.199034266818493,0,0.257347907114715,0.568326998791185,0.621377317606506,0.234526059981096,0.36012412292203,0.473489471170421,0.393528463494808,0.462801338662135,0.697601834251224,0.536546802799238,0.467061369468678,0.493679549740441,0.656669856316381,0.486412857275134,0.730999937126662,0,0.402619256281115,0.210289948564127,0.102904612379284,0.330418782983798,0.528901133327089,0.426576501070468,0.464473343720877,0.257734922644187,0,0,0.190225626112559,0,0.494096864172033,0,0.198956472041151,0.779856348476481,0.898819408654221,0,0,0,0.571242563048644,0,0.407302655690628,0.387904974335251,0.420814919341911,0.252946148497029,0.147610147979602,0.470996183524124,0.493588655687202,0.296452627087149,0.500535317148282,0.196558995113203,0.449724224769707,0.405720242777006,0.72353147925725,1.52775511068852,0.575392274901621,0.324270453550071,0.274561413188081,0,0,0,0,0.358794827043824,0,0,0.189491411770485,0,0.169745085775188,0.234690248288502,0.335012514883631,0,0.585400943573396,0.315270288212382,0,0.318909537314974,0.327726629431476,0,0.289298117163023,0,0,0,0,0.160550589987792,0.234423373184406,0.327869890753351,0.252470927204373,0.631016438832513,0.780877488593277,0.430846795465598,0.477937595905104,0.445597348164788,1.13230612315533,0,0.584511715822624,0.790575555893047,0.321321316421807,0.425820255624806,0.178065603667255,0.325773918707152,1.15479086080775,0,0.485561272309963,0,0.188605079755898,0,0,0,0.363533729477506,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0.354680467284547,0.178368817602071,0,0.304464949114599,0.23467170806371,0.21183207086382,0,0.8244312647074,0.645857706783622,0.361877549568935,0.119372344003136,0.164140899745061,0.874442509889552,0,0.341741761595705,0,0.555583582109135,0.376736914009382,0.683471138605126,0.457556346413045,0.679913719975421,0.69975726161829,1.38199973804424,0,0.316335993581135,0.609958401380546,0.216010681643603,0,0,0.404593039154462,0.41326727862668,0,0.388844919875379,0.621339313086926,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0.5208175393758,0.209718688851422,0,0.288030006257865,1.89606672376907,0,0.308132871494482,0.649604114888975,0.716106782669926,0.993406773906324,1.32214994471966,1.18151621739662,1.00966449948148,1.5241361331,1.61321896218945,1.16949456887703,1.6356013078856,1.28564592399726,0.453460767230423,0.221985953374065,0.358855426437903,0,0.579568782096571,0.187682475451182,0.73260649706906,0.428736758158132,1.00314420807073,0,0,0,0,0,0.755393897389701,0,0,0.453142408984205,0,0.103787347584177,0.399024873401031,0.170733605754134,0,0,0.367687016900028,0,0.618105171716683,0,0,0.25347929989024,0.377252682772152,0.468207537349412,0.384150914429216,0.229741875822453,0,0.347652977834566,0.578727661391115,0,0.441596760403192,0,0.177475806159338,0.238436189947321,0.290692833264657,0.376437521661322,0.25384382367503,0.365855945745545,0.263069711437843,0.135804113845862,0,0.237270036248348,0.689531376628944,0.409231043169689,0,0.192906610981141,0,0.233931608445408,0.429742108096597,0.765153328275374,0.441182838239031,0.231867835620421
|short_description=p12@Aff1
|short_description=p12@Aff1
}}
}}

Latest revision as of 12:36, 1 October 2015

Short description:p12@Aff1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_12_at_Aff1_5end
Coexpression cluster:NA
Association with transcript: -226bp_to_ENSMUST00000054979, NM_133919, uc008yjt.1_5end
EntrezGene:Aff1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p12@Aff1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I52.09
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.90
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E71.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.64
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.40
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.31
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.40
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A51.40
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A41.65
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.42
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.51
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H31.05
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.38
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I92.18
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.68
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.28
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.31
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H91.81
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.58
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.13
cortex, adult.CNhs10473.12-14D50.35
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.50
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.45
eyeball, neonate N00.CNhs11207.633-15C60.54
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.57
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.36
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G30.54
heart, neonate N00.CNhs11213.639-21E30.47
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.49
heart, neonate N20.CNhs11127.821-26I60.73
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E80.21
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.57
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.42
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.47
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.72
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.33
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.78
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.13
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.18
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.87
spinal cord, adult.CNhs10505.24-13C90.00
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.38
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.40
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.39
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.99
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D31.52
thymus, neonate N10.CNhs11194.748-24E41.61
thymus, neonate N20.CNhs11186.820-7A21.17
thymus, neonate N25.CNhs11125.1362-25G71.64
thymus, neonate N30.CNhs11132.1393-42G21.29
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.36
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.00
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thymus2.47e-2123
neck2.47e-2123
respiratory system epithelium2.47e-2123
hemolymphoid system gland2.47e-2123
pharyngeal epithelium2.47e-2123
thymic region2.47e-2123
pharyngeal gland2.47e-2123
entire pharyngeal arch endoderm2.47e-2123
thymus primordium2.47e-2123
early pharyngeal endoderm2.47e-2123
pharynx2.45e-2024
gland of gut2.45e-2024
upper respiratory tract2.45e-2024
chordate pharynx2.45e-2024
pharyngeal arch system2.45e-2024
pharyngeal region of foregut2.45e-2024
segment of respiratory tract8.58e-1827
hemopoietic organ2.18e-1629
immune organ2.18e-1629
hemolymphoid system2.87e-1448
immune system2.87e-1448
hematopoietic system2.67e-1345
blood island2.67e-1345
mixed endoderm/mesoderm-derived structure3.86e-1335
craniocervical region1.05e-1236
respiratory tract7.65e-1141
respiratory system1.59e-1042
gut epithelium2.14e-1055
anterior region of body3.21e-1043
unilaminar epithelium2.10e-0966
gland3.66e-0865
endocrine gland7.57e-0860
endo-epithelium1.12e-0769
lateral plate mesoderm2.89e-0787
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