FFCP PHASE1:Hg19::chr13:110829310..110829326,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:110829310..110829326,- | |||
|coexpression_cluster_id=C566 | |||
|description=CAGE_peak_at_chr13:110829310..110829326,- | |description=CAGE_peak_at_chr13:110829310..110829326,- | ||
|id=chr13:110829310..110829326,- | |id=chr13:110829310..110829326,- | ||
|ontology_enrichment_celltype=CL:0000222!1.19e-12!119;CL:0000213!6.37e-08!57;CL:0000215!6.37e-08!57;CL:1000449!1.68e-07!16;CL:0000055!2.55e-07!180 | |ontology_enrichment_celltype=CL:0000222!1.19e-12!119;CL:0000213!6.37e-08!57;CL:0000215!6.37e-08!57;CL:1000449!1.68e-07!16;CL:0000055!2.55e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002138;5.16e-11;6!CL:0002569;8.78e-11;6!CL:1000746;1.76e-09;7!CL:1000612;1.76e-09;7!CL:0000115;7.10e-09;36!CL:1000449;2.52e-08;15!CL:0000669;2.76e-08;4!CL:0000349;7.29e-08;19!CL:0002139;2.49e-07;24!CL:1000497;3.97e-07;17!CL:0002518;3.97e-07;17!CL:0002681;8.67e-07;12!CL:0002584;8.67e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002569,9.44e-11,6;CL:0005020,1.30e-10,6;CL:0002138,1.30e-10,6;CL:0005022,1.30e-10,6;CL:0000213,1.50e-10,58;CL:0000215,1.50e-10,58;CL:0000115,2.02e-09,36;CL:1000746,3.45e-09,7;CL:1000612,3.45e-09,7;CL:1000449,2.81e-08,15;CL:0000669,4.57e-08,4;CL:0000349,1.03e-07,19;CL:0002078,1.07e-07,45;CL:0002139,3.70e-07,24;CL:1000497,4.36e-07,17;CL:0002518,4.36e-07,17 | |||
|ontology_enrichment_development_v019=CL:0005022;5.16e-11;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!1.66e-09!113;UBERON:0003914!1.96e-09!118;UBERON:0003886!4.46e-09!63;UBERON:0004876!4.83e-09!20;UBERON:0002049!5.28e-09!79;UBERON:0007798!5.28e-09!79;UBERON:0003103!6.96e-09!69;UBERON:0004535!8.04e-09!110;UBERON:0004872!4.75e-08!84;UBERON:0003887!5.89e-08!21;UBERON:0000080!5.94e-08!18;UBERON:0002120!5.94e-08!18;UBERON:0004875!5.94e-08!18;UBERON:0005721!5.94e-08!18;UBERON:0005754!5.94e-08!18;UBERON:0007297!5.94e-08!18;UBERON:0000353!1.06e-07!17;UBERON:0006555!1.64e-07!17;UBERON:0005103!1.64e-07!17;UBERON:0000083!1.64e-07!17;UBERON:0009201!1.64e-07!17;UBERON:0004819!1.64e-07!17;UBERON:0006553!1.64e-07!17;UBERON:0003074!1.64e-07!17;UBERON:0003060!1.64e-07!17;UBERON:0004211!1.68e-07!16;UBERON:0001285!1.68e-07!16;UBERON:0007684!1.68e-07!16;UBERON:0003220!1.68e-07!16;UBERON:0004208!1.68e-07!16;UBERON:0002553!2.36e-07!70 | |||
|ontology_enrichment_uberon_v019=UBERON:0003422;8.78e-11;6!UBERON:0000074;1.76e-09;7!UBERON:0001229;1.76e-09;7!UBERON:0003104;4.07e-09;7!UBERON:0009142;4.07e-09;7!UBERON:0002331;1.73e-08;10!UBERON:0006555;2.52e-08;15!UBERON:0004819;2.52e-08;15!UBERON:0001285;2.52e-08;15!UBERON:0007684;2.52e-08;15!UBERON:0003688;3.74e-08;6!UBERON:0002358;3.74e-08;6!UBERON:0003684;3.74e-08;6!UBERON:0001178;3.74e-08;6!UBERON:0001473;4.92e-08;8!UBERON:0004536;4.92e-08;8!UBERON:0006558;4.92e-08;8!UBERON:0000478;3.21e-07;24!UBERON:0000353;8.19e-07;15!UBERON:0001225;8.67e-07;12!UBERON:0008987;8.67e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003422,9.44e-11,6;UBERON:0010532,3.45e-09,7;UBERON:0000074,3.45e-09,7;UBERON:0001229,3.45e-09,7;UBERON:0001230,3.45e-09,7;UBERON:0003220,3.45e-09,7;UBERON:0005749,3.45e-09,7;UBERON:0004199,3.45e-09,7;UBERON:0004209,3.45e-09,7;UBERON:0004198,3.45e-09,7;UBERON:0002331,1.82e-08,10;UBERON:0000358,1.82e-08,10;UBERON:0000307,1.82e-08,10;UBERON:0000091,1.82e-08,10;UBERON:0000087,1.82e-08,10;UBERON:0007010,1.82e-08,10;UBERON:0007806,1.82e-08,10;UBERON:0008780,1.82e-08,10;UBERON:0005728,1.82e-08,10;UBERON:0004211,2.81e-08,15;UBERON:0009773,2.81e-08,15;UBERON:0001231,2.81e-08,15;UBERON:0001285,2.81e-08,15;UBERON:0007684,2.81e-08,15;UBERON:0004208,2.81e-08,15;UBERON:0005103,6.26e-08,8;UBERON:0000083,6.26e-08,8;UBERON:0009201,6.26e-08,8;UBERON:0006553,6.26e-08,8;UBERON:0003074,6.26e-08,8;UBERON:0003060,6.26e-08,8;UBERON:0003688,6.76e-08,6;UBERON:0002358,6.76e-08,6;UBERON:0003684,6.76e-08,6;UBERON:0001178,6.76e-08,6;UBERON:0001473,9.57e-08,8;UBERON:0004536,9.57e-08,8;UBERON:0006558,9.57e-08,8;UBERON:0006555,1.21e-07,16;UBERON:0004819,1.21e-07,16;UBERON:0004876,2.23e-07,11;UBERON:0002417,3.70e-07,60;UBERON:0000916,3.70e-07,60;UBERON:0000478,4.33e-07,24;UBERON:0000080,5.94e-07,9;UBERON:0002120,5.94e-07,9;UBERON:0004875,5.94e-07,9;UBERON:0005721,5.94e-07,9;UBERON:0005754,5.94e-07,9;UBERON:0007297,5.94e-07,9 | |||
|phase1_expression=0.908391896352783,6.63711624062048,2.81908808191942,1.0007329835313,2.23480547213644,4.36169262050184,2.53299878168311,0,2.87304191019822,0.245733936501509,0.697801167972428,0,0.527533956456907,0.123766352960047,0,0,0,0,0.975865597581014,0,0.204000691244253,0.313454721478088,0,0.136874425072884,1.25542639594803,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,1.34140171940727,0.895037932904712,0.722878304769133,0,0.869079113764942,0,0,0.189069634328136,1.33037638477538,0.702678285545008,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0.419499436209906,3.57653454522088,0,1.03366703667732,1.06729878806013,1.33888245105868,3.22263453687318,0,9.51842024437861,0,1.62028389576352,0.625098097988558,0.44905874525234,0.225222960966644,0,0,1.09921046358244,0,0,0,1.98788780678127,1.77282716330412,0,0.573673241497627,0,0.560677600142307,0,8.14002909776628,0.933633106199299,1.75123873690594,0.817309515567294,1.81628913173918,1.15235184896,0,0,0,0,0,0,0,0,0.122834317311768,0,0,1.97813543422845,0,0.718618141816238,0,0,0,0,0.612975591598039,0,1.92834711372036,0.717558542755448,0.427114777637135,0.423863802319124,0,0,0.515281080091258,1.11670113798954,0.675105328965065,0.487185025805993,0.252433774244115,0,0.323292113637624,0.355009592516614,0,0.67824236924195,0,0,0,0,0.132529768321485,0.232387885739037,0.207322110030741,0.504641701751257,0.36497735907583,0,0,0,0.464367928031979,0,0,0.337169380156203,0,0.441175890929576,0,0,0,0.196221465125346,0,0.738155454624648,2.80483547606892,0.4115740113314,1.47008711385542,0,0,0,0,0,0.514703430895577,0,0,0,0.0925884451585296,0,0,2.88662684050547,0,1.05667824812239,2.45422961193825,3.70388410061289,4.56609965363036,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0.383382679165211,0,0,0,0,0,0,0,0,1.71072446022705,0.411309970813294,0.600686115687835,0,0.448524337381443,1.30788020649984,1.1734125731352,2.06834745212444,0,3.381211010224,3.45719551560332,1.04007436911366,0,0,0,2.00169191121407,1.08524321078289,1.64648067356154,0.65147236858747,3.19852753868291,1.58390374586686,0.301439377059586,0.871533458600294,2.7992437530976,0,0,0,2.15662369942424,3.44585807502342,0,0.289562613335158,0,0.179060963239896,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0.24538298343828,0,0,1.87173775377726,3.03329280955175,1.26161932027148,0,0,0,0,1.99267679560631,0.368738337083406,0.0868836144680828,2.34961388955289,3.77457766191941,0,0,0,0,0,0.30239029332968,0.248107807818777,0.920771839728375,3.36792113319688,0.512556597022804,2.04682899626681,4.98647155545183,1.48418066444991,0.308419387605311,0.355123450626254,0,1.55776328755086,0.116210378459959,0,1.20303882181971,0,0.229628896329213,1.45672934405374,0.393373244878272,0,1.61732207919271,0.784349769176855,1.46139224653261,1.58327443339314,3.4120015221269,1.02056223165909,1.72732732881711,10.7959076883203,1.08378575017541,3.01013864312912,0.509752546090077,0.831076008928724,0.671624264166535,0,0,0,0.656029291399411,0,0.515205058238611,0,0,0,0,1.6068392984416,0,0.154048617114644,0.15350367472613,0.275673144969061,0.214840489736547,0.290033387828457,0.596586391912706,0.178064071293475,0.165284915360978,0.576570202095319,0.127612712494584,0,0,0.62962469366128,0,0.308033580176089,0,0,0.37064843820784,0,0.372158369359667,1.58189712359363,1.90630193923825,0.255897791311334,0,0,0,0.359744915166629,0.823611089208164,0.471249609382746,0.404364963146632,0,0,0.975267478179181,2.19342140668156,1.05650146756755,0.136499911407986,0.707027159768564,0,0,0.66343897524122,0,0,0.655894752046633,0.405820753925408,0.30982349809975,0.563391205064483,0.286822704408103,0.589494246078727,0.7133421029625,0,0,0.329294892959902,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0.597743964753209,0.276283915531148,0,0.306806047506464,0,0.622079175323615,0,0,0,0.394573622547734,0,0,0,0.0927680981618513,0,0,0,1.44999915086959,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0.113942055847001,0,0.269272933229316,0.217294743844016,0.957003479195758,1.28236630762607,3.19820865611181,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0,0,0,0.611030144933625,0,0.123563938946503,0.417687798021821,0,0.802577647298789,0,0,0,0,0,0,0,0.442306057399416,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.19351266257817,0,0.0821154570532092,0.193978032976839,0,1.12990370390266,0.411125773940253,0,0,0,0,0.640358984218058,0,0,0,0,0.14405479798815,0,0,0.135904206073614,0.313808538937,0,0,0,0,0,1.28929632425987,0,1.11712960508902,0.458320848023367,2.87149209830726,0.399358000997982,1.28767814440971,0.223171457441873,0.335917362433631,5.40449825313605,0,0,0,0,0,0,0,0,0,0,0.83088067605837,0,0,0,0,0.236417121897595,0.577000469484979,0,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| ||
|short_description=p@chr13:110829310..110829326,- | |short_description=p@chr13:110829310..110829326,- | ||
}} | }} |
Latest revision as of 14:29, 24 July 2015
Short description: | p@chr13:110829310..110829326, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:110829310..110829326, - |
Coexpression cluster: | C566_Pericytes_Renal_hepatic_Fibroblast_Endothelial_Hepatic_Lens |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of umbilical cord | 9.44e-11 | 6 |
lymphangioblast | 1.30e-10 | 6 |
endothelial cell of lymphatic vessel | 1.30e-10 | 6 |
vascular lymphangioblast | 1.30e-10 | 6 |
lining cell | 1.50e-10 | 58 |
barrier cell | 1.50e-10 | 58 |
endothelial cell | 2.02e-09 | 36 |
glomerular cell | 3.45e-09 | 7 |
kidney corpuscule cell | 3.45e-09 | 7 |
epithelial cell of nephron | 2.81e-08 | 15 |
pericyte cell | 4.57e-08 | 4 |
extraembryonic cell | 1.03e-07 | 19 |
meso-epithelial cell | 1.07e-07 | 45 |
endothelial cell of vascular tree | 3.70e-07 | 24 |
kidney cell | 4.36e-07 | 17 |
kidney epithelial cell | 4.36e-07 | 17 |