FFCP PHASE1:Mm9::chr19:38470510..38470512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=240660 | |EntrezGene=240660 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BY79,Q8BMM7 | |UniProt=Q8BY79,Q8BMM7 | ||
|association_with_transcript=40bp_to_ENSMUST00000054098,NM_175507,uc008hjm.1,uc008hjn.1,uc012blh.1_5end | |association_with_transcript=40bp_to_ENSMUST00000054098,NM_175507,uc008hjm.1,uc008hjn.1,uc012blh.1_5end | ||
|cluster_id=chr19:38470510..38470512,+ | |||
|description=CAGE_peak_6_at_Tmem20_5end | |description=CAGE_peak_6_at_Tmem20_5end | ||
|id=chr19:38470510..38470512,+ | |id=chr19:38470510..38470512,+ | ||
|ontology_enrichment_celltype=CL:0002563!1.94e-08!9;CL:0002251!1.94e-08!9 | |ontology_enrichment_celltype=CL:0002563!1.94e-08!9;CL:0002251!1.94e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.47e-23,9;CL:0002251,1.47e-23,9;CL:0000066,2.58e-20,25;CL:0000239,1.03e-18,6;CL:0000677,1.03e-18,6;CL:0000584,1.03e-18,6;CL:0000075,5.02e-16,7;CL:0000682,1.17e-14,3;CL:0002076,7.36e-14,15;CL:0000223,2.03e-13,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!4.35e-13!15;UBERON:0001242!1.07e-11!13;UBERON:0000060!1.07e-11!13;UBERON:0001262!1.07e-11!13;UBERON:0004786!1.07e-11!13;UBERON:0000160!2.48e-10!43;UBERON:0005409!3.83e-10!59;UBERON:0003350!1.94e-08!9;UBERON:0004808!1.94e-08!9;UBERON:0001277!1.94e-08!9;UBERON:0004923!2.14e-07!24;UBERON:0004119!4.82e-07!130;UBERON:0000925!4.82e-07!130;UBERON:0006595!4.82e-07!130;UBERON:0001007!5.54e-07!128;UBERON:0001555!5.54e-07!128;UBERON:0007026!5.54e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,6.19e-33,13;UBERON:0001262,6.19e-33,13;UBERON:0004786,6.19e-33,13;UBERON:0000344,2.33e-28,15;UBERON:0000160,6.45e-26,31;UBERON:0003350,1.47e-23,9;UBERON:0004808,1.47e-23,9;UBERON:0001277,1.47e-23,9;UBERON:0000485,3.73e-19,11;UBERON:0004923,3.48e-17,24;UBERON:0005409,2.43e-16,47;UBERON:0000331,3.29e-14,3;UBERON:0002116,3.29e-14,3;UBERON:0001204,3.29e-14,3;UBERON:0001168,3.29e-14,3;UBERON:0002108,8.66e-11,4;UBERON:0001155,1.17e-09,2;UBERON:0000059,1.17e-09,2 | |||
|phase1_expression=0,1.39590163055744,1.36499771816861,3.93203474698879,2.50447864973174,1.00727563147134,0.233612640595526,0.258246646883153,0.140788722151667,0,0,0.478632953972018,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0,0,0,0.0992909512008853,0,0.799962113967033,0.68822784320151,1.72269589234506,3.4460959692726,1.939241094173,1.90023419456374,2.52030129759931,1.10865255327652,0,0,0,1.1554064790051,0.997407872150954,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.869593466105033,0,2.719885334831,0,0,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0.148442139064825,0.173485326766136,0,0,0,0.352766121407114,0.376999773989026,0,0,0,0,0.441683036920787,0,1.86391761218122,0,0,1.02182822083437,0.11981512450592,0,0,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.59710280045548,0,0.257347907114715,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0.660837565967596,1.85115396664481,0,0,0.128867461322093,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0.216138049874694,1.1948476395262,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0.316182685621286,0.295220295959204,0.156998727841375,0.370191491765402,0.592905254174298,0,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0.575392274901621,0.648540907100142,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0.896987067609561,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0.716906393857656,0.222798674082394,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0.948110273807448,0,1.03135543248187,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0,0.138199973804424,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.661227645802687,0.523511883968059,0.777689839750757,0,0.56369293868419,0.149516546043979,0,0,0,0.168956125490778,0.352071715937262,0.5208175393758,0.419437377702843,0,0.576060012515731,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0.194915761479505,0,0,0,0,0.0897138566094757,0,0.386379188064381,0.750729901804728,0.36630324853453,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0.561142271657738,0,0,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0,0 | |phase1_expression=0,1.39590163055744,1.36499771816861,3.93203474698879,2.50447864973174,1.00727563147134,0.233612640595526,0.258246646883153,0.140788722151667,0,0,0.478632953972018,0,0,0.333109761815663,0.202475267389826,0.699561878128147,0,0,0,0,0.0992909512008853,0,0.799962113967033,0.68822784320151,1.72269589234506,3.4460959692726,1.939241094173,1.90023419456374,2.52030129759931,1.10865255327652,0,0,0,1.1554064790051,0.997407872150954,1.22501613757421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0.0914876436024097,0,0,0,0,0,0,0,0,0,0.869593466105033,0,2.719885334831,0,0,0.896053774194671,0.140444420131752,0,0,0,0,0,0,0,0,0,0,1.1418387971906,0,0.148442139064825,0.173485326766136,0,0,0,0.352766121407114,0.376999773989026,0,0,0,0,0.441683036920787,0,1.86391761218122,0,0,1.02182822083437,0.11981512450592,0,0,0,0,0,0.173824320192276,0,0,0,0,0.124406970610093,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0.59710280045548,0,0.257347907114715,0,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0,0,0.660837565967596,1.85115396664481,0,0,0.128867461322093,0,0.22237804384487,0,0.949058123089023,0.164698954724011,0,0.198956472041151,0.58489226135736,0,0.216138049874694,1.1948476395262,0.189667900953082,0,0,0,0.193952487167626,0.210407459670956,0.316182685621286,0.295220295959204,0.156998727841375,0.370191491765402,0.592905254174298,0,0,0,0.202860121388503,0.482354319504834,0.25462585178142,0.575392274901621,0.648540907100142,0.274561413188081,0,0.372140947668503,0.624075346229121,0.505157755894224,0.896987067609561,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0,0.117211686592203,0,0.252470927204373,0,0.390438744296638,0.215423397732799,0.716906393857656,0.222798674082394,0.283076530788832,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0.188605079755898,0,0,0,0.363533729477506,0,0.948110273807448,0,1.03135543248187,0,0,0,0,0,0,0.164549020602121,0.304464949114599,0.23467170806371,0,0,0.16488625294148,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0.136694227721025,0,0,0,0.138199973804424,0.954670618015114,0,0,0,0.209088296014469,0.218362563746178,0.269728692769641,0.661227645802687,0.523511883968059,0.777689839750757,0,0.56369293868419,0.149516546043979,0,0,0,0.168956125490778,0.352071715937262,0.5208175393758,0.419437377702843,0,0.576060012515731,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0.194915761479505,0,0,0,0,0.0897138566094757,0,0.386379188064381,0.750729901804728,0.36630324853453,0,0,0.564751842617067,0,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.128050304809739,0,0,0.231768651889711,0.192909220463705,0,0.147198920134397,0,0,0.238436189947321,0,0,0.0846146078916765,0.365855945745545,0,0.135804113845862,0.561142271657738,0,0,0,0.154936841185966,0.385813221962283,0,0.233931608445408,0.429742108096597,0,0,0 | ||
|short_description=p6@Tmem20 | |short_description=p6@Tmem20 | ||
}} | }} |
Latest revision as of 17:00, 25 September 2015
Short description: | p6@Tmem20 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Tmem20_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 40bp_to_ENSMUST00000054098, NM_175507, uc008hjm.1, uc008hjn.1, uc012blh.1_5end |
EntrezGene: | Tmem20 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.47e-23 | 9 |
epithelial cell of alimentary canal | 1.47e-23 | 9 |
epithelial cell | 2.58e-20 | 25 |
brush border epithelial cell | 1.03e-18 | 6 |
gut absorptive cell | 1.03e-18 | 6 |
enterocyte | 1.03e-18 | 6 |
columnar/cuboidal epithelial cell | 5.02e-16 | 7 |
M cell of gut | 1.17e-14 | 3 |
endo-epithelial cell | 7.36e-14 | 15 |
endodermal cell | 2.03e-13 | 20 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 6.19e-33 | 13 |
wall of intestine | 6.19e-33 | 13 |
gastrointestinal system mucosa | 6.19e-33 | 13 |
mucosa | 2.33e-28 | 15 |
intestine | 6.45e-26 | 31 |
epithelium of mucosa | 1.47e-23 | 9 |
gastrointestinal system epithelium | 1.47e-23 | 9 |
intestinal epithelium | 1.47e-23 | 9 |
simple columnar epithelium | 3.73e-19 | 11 |
organ component layer | 3.48e-17 | 24 |
gastrointestinal system | 2.43e-16 | 47 |
ileal mucosa | 3.29e-14 | 3 |
ileum | 3.29e-14 | 3 |
mucosa of small intestine | 3.29e-14 | 3 |
wall of small intestine | 3.29e-14 | 3 |
small intestine | 8.66e-11 | 4 |
colon | 1.17e-09 | 2 |
large intestine | 1.17e-09 | 2 |