FFCP PHASE1:Mm9::chr1:194979383..194979393,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=54139 | |EntrezGene=54139 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2301 | |||
|TSSclassifier=NA | |||
|UniProt=P97431,Q8C2Z7 | |UniProt=P97431,Q8C2Z7 | ||
|association_with_transcript=77bp_to_ENSMUST00000076521,ENSMUST00000138826,NM_016851,uc007edx.1,uc007edy.1_5end | |association_with_transcript=77bp_to_ENSMUST00000076521,ENSMUST00000138826,NM_016851,uc007edx.1,uc007edy.1_5end | ||
|cluster_id=chr1:194979383..194979393,+ | |||
|description=CAGE_peak_3_at_Irf6_5end | |description=CAGE_peak_3_at_Irf6_5end | ||
|id=chr1:194979383..194979393,+ | |id=chr1:194979383..194979393,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.84e-11!25;CL:0000223!3.17e-08!20;CL:0002563!2.27e-07!9;CL:0002251!2.27e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.12e-17,25;CL:0000223,3.16e-13,20;CL:0002076,1.46e-12,15;CL:0002563,1.78e-12,9;CL:0002251,1.78e-12,9;CL:0000075,1.51e-10,7;CL:0000239,1.73e-09,6;CL:0000677,1.73e-09,6;CL:0000584,1.73e-09,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!6.94e-18!59;UBERON:0000160!8.22e-18!43;UBERON:0001007!6.16e-17!128;UBERON:0001555!6.16e-17!128;UBERON:0007026!6.16e-17!128;UBERON:0004119!1.20e-16!130;UBERON:0000925!1.20e-16!130;UBERON:0006595!1.20e-16!130;UBERON:0004921!1.13e-15!126;UBERON:0004185!1.13e-15!126;UBERON:0000344!2.48e-11!15;UBERON:0001242!8.06e-10!13;UBERON:0000060!8.06e-10!13;UBERON:0001262!8.06e-10!13;UBERON:0004786!8.06e-10!13;UBERON:0000485!3.65e-08!11;UBERON:0003350!2.27e-07!9;UBERON:0004808!2.27e-07!9;UBERON:0001277!2.27e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.86e-24,47;UBERON:0000160,1.08e-22,31;UBERON:0000344,6.58e-20,15;UBERON:0001242,4.56e-17,13;UBERON:0001262,4.56e-17,13;UBERON:0004786,4.56e-17,13;UBERON:0001007,9.39e-14,116;UBERON:0001555,9.39e-14,116;UBERON:0007026,9.39e-14,116;UBERON:0004119,2.64e-13,118;UBERON:0000925,2.64e-13,118;UBERON:0006595,2.64e-13,118;UBERON:0003350,1.78e-12,9;UBERON:0004808,1.78e-12,9;UBERON:0001277,1.78e-12,9;UBERON:0004921,3.80e-12,114;UBERON:0004923,3.94e-12,24;UBERON:0000485,4.51e-12,11;UBERON:0000014,1.48e-07,5;UBERON:0001003,1.48e-07,5;UBERON:0002097,1.48e-07,5;UBERON:0002199,1.48e-07,5;UBERON:0007029,1.48e-07,5;UBERON:0007376,1.48e-07,5;UBERON:0002416,1.48e-07,5;UBERON:0007383,1.48e-07,5 | |||
|phase1_expression=0.80074423552397,4.88565570695105,7.73498706962211,4.53696316960245,3.00537437967808,4.02910252588535,2.33612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0,0,4.47978783821539,4.81759490241057,5.16808767703518,3.4460959692726,4.52489588640367,3.80046838912748,4.03248207615889,1.77384408524244,0,0,0,3.46621943701529,1.82858109894342,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0.860423876981386,2.03991400112325,0.539703191637817,0.649776417447669,1.34408066129201,0.702222100658759,0,0,0,2.25349471642689,0,0,0,5.41227602528035,3.80039798212648,4.04419556011827,1.02765491747154,0,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0,1.23597483867187,0.144599356919912,0,0,0,0,7.45567044872489,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.248813941220186,0,0.631325567659422,0,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.876782929710299,1.11218899690239,0.696504333044333,1.64625709126355,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,1.98251269790279,2.64450566663544,0.213288250535234,0.232236671860439,0.257734922644187,1.4117846723634,1.11189021922435,0.570676878337677,0.474529061544512,1.81168850196412,1.75934646160189,1.39269530428806,1.36474860983384,0.898819408654221,3.6743468478698,3.58454291857861,0.189667900953082,0.114248512609729,0,0.407302655690628,0,0.631222379012867,0.189709611372772,0.442830443938806,0.31399745568275,0.123397163921801,1.1858105083486,0,0.393117990226406,0,0,0,0,0.287696137450811,0.324270453550071,0.823684239564244,0,0.744281895337007,0,0.757736633841335,0.358794827043824,0.964887042726734,0,0,0.162964976442026,0,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0.172684981865896,0,0,0,1.47529281905711,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.651547837414304,1.15479086080775,1.32745138339963,0.485561272309963,0,0.565815239267694,0.295301892880773,0.922305443831782,1.03371317267288,0.727067458955011,1.42598951353889,0.316036757935816,0,1.03135543248187,0,0,0,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0,0.21183207086382,1.10264199027481,2.96795255294664,2.26050197374268,2.47282992205439,4.05865969610664,3.77524069413641,2.91480836629851,0,0,0,0,0,0,0,0.169978429993855,0,0,1.90934123603023,0.158167996790568,1.01659733563424,0.972048067396211,2.71814784818809,1.9652630737156,2.02296519577231,1.90102948168273,1.30877970992015,2.20345454596048,1.86401793926078,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0.443068581523732,0.100966449948148,0.15241361331,0.100826185136841,0.292373642219257,0.0962118416403295,0,2.72076460338254,0,0,0,0.965947970160952,0.375364950902364,0.73260649706906,6.00231461421384,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,1.21553358534147,0,0.551530525350042,0.44449345560323,0.618105171716683,0.64183841918363,0,0.25347929989024,0,0.37456602987953,0.512201219238954,0.631790158511746,0.952587382566147,0.579421629724277,0.77163688185482,0,0.441596760403192,1.02860775715625,0.70990322463735,0,0.290692833264657,0.188218760830661,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,0,0.355905054372522,0.0985044823755635,0.818462086339379,0.154936841185966,0.771626443924566,1.49886346762768,0.467863216890817,1.07435527024149,0.57386499620653,1.32354851471709,0 | |phase1_expression=0.80074423552397,4.88565570695105,7.73498706962211,4.53696316960245,3.00537437967808,4.02910252588535,2.33612640595526,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.17008658030214,0,0,4.47978783821539,4.81759490241057,5.16808767703518,3.4460959692726,4.52489588640367,3.80046838912748,4.03248207615889,1.77384408524244,0,0,0,3.46621943701529,1.82858109894342,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15945795480671,0.860423876981386,2.03991400112325,0.539703191637817,0.649776417447669,1.34408066129201,0.702222100658759,0,0,0,2.25349471642689,0,0,0,5.41227602528035,3.80039798212648,4.04419556011827,1.02765491747154,0,0.148442139064825,0.173485326766136,0,0,0,0.117588707135705,0,1.23597483867187,0.144599356919912,0,0,0,0,7.45567044872489,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.509196819251581,0.248813941220186,0,0.631325567659422,0,0,0.180062129805349,0,0.136072998302656,0.12811372028485,0,0.258703370739016,0.215567992932842,0.189106080167819,0.175951124163949,0.876782929710299,1.11218899690239,0.696504333044333,1.64625709126355,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0.0810688095458557,0,0,0,0,0,1.98251269790279,2.64450566663544,0.213288250535234,0.232236671860439,0.257734922644187,1.4117846723634,1.11189021922435,0.570676878337677,0.474529061544512,1.81168850196412,1.75934646160189,1.39269530428806,1.36474860983384,0.898819408654221,3.6743468478698,3.58454291857861,0.189667900953082,0.114248512609729,0,0.407302655690628,0,0.631222379012867,0.189709611372772,0.442830443938806,0.31399745568275,0.123397163921801,1.1858105083486,0,0.393117990226406,0,0,0,0,0.287696137450811,0.324270453550071,0.823684239564244,0,0.744281895337007,0,0.757736633841335,0.358794827043824,0.964887042726734,0,0,0.162964976442026,0,0.234690248288502,0.335012514883631,0.238043640886014,0,0.157635144106191,0.221464689648775,0,0.327726629431476,0.172684981865896,0,0,0,1.47529281905711,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.651547837414304,1.15479086080775,1.32745138339963,0.485561272309963,0,0.565815239267694,0.295301892880773,0.922305443831782,1.03371317267288,0.727067458955011,1.42598951353889,0.316036757935816,0,1.03135543248187,0,0,0,0.214337035031592,0,0.356737635204141,0.164549020602121,0,0,0.21183207086382,1.10264199027481,2.96795255294664,2.26050197374268,2.47282992205439,4.05865969610664,3.77524069413641,2.91480836629851,0,0,0,0,0,0,0,0.169978429993855,0,0,1.90934123603023,0.158167996790568,1.01659733563424,0.972048067396211,2.71814784818809,1.9652630737156,2.02296519577231,1.90102948168273,1.30877970992015,2.20345454596048,1.86401793926078,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0.104859344425711,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0.179026695667481,0.198681354781265,0,0.443068581523732,0.100966449948148,0.15241361331,0.100826185136841,0.292373642219257,0.0962118416403295,0,2.72076460338254,0,0,0,0.965947970160952,0.375364950902364,0.73260649706906,6.00231461421384,2.00628841614145,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,1.21553358534147,0,0.551530525350042,0.44449345560323,0.618105171716683,0.64183841918363,0,0.25347929989024,0,0.37456602987953,0.512201219238954,0.631790158511746,0.952587382566147,0.579421629724277,0.77163688185482,0,0.441596760403192,1.02860775715625,0.70990322463735,0,0.290692833264657,0.188218760830661,0.338458431566706,0.548783918618318,0.263069711437843,0.543216455383447,0,0.355905054372522,0.0985044823755635,0.818462086339379,0.154936841185966,0.771626443924566,1.49886346762768,0.467863216890817,1.07435527024149,0.57386499620653,1.32354851471709,0 | ||
|short_description=p3@Irf6 | |short_description=p3@Irf6 | ||
}} | }} |
Latest revision as of 00:36, 27 September 2015
Short description: | p3@Irf6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Irf6_5end |
Coexpression cluster: | MCL_coexpression_mm9:2301 |
Association with transcript: | 77bp_to_ENSMUST00000076521, ENSMUST00000138826, NM_016851, uc007edx.1, uc007edy.1_5end |
EntrezGene: | Irf6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.12e-17 | 25 |
endodermal cell | 3.16e-13 | 20 |
endo-epithelial cell | 1.46e-12 | 15 |
intestinal epithelial cell | 1.78e-12 | 9 |
epithelial cell of alimentary canal | 1.78e-12 | 9 |
columnar/cuboidal epithelial cell | 1.51e-10 | 7 |
brush border epithelial cell | 1.73e-09 | 6 |
gut absorptive cell | 1.73e-09 | 6 |
enterocyte | 1.73e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 6.86e-24 | 47 |
intestine | 1.08e-22 | 31 |
mucosa | 6.58e-20 | 15 |
intestinal mucosa | 4.56e-17 | 13 |
wall of intestine | 4.56e-17 | 13 |
gastrointestinal system mucosa | 4.56e-17 | 13 |
digestive system | 9.39e-14 | 116 |
digestive tract | 9.39e-14 | 116 |
primitive gut | 9.39e-14 | 116 |
endoderm-derived structure | 2.64e-13 | 118 |
endoderm | 2.64e-13 | 118 |
presumptive endoderm | 2.64e-13 | 118 |
epithelium of mucosa | 1.78e-12 | 9 |
gastrointestinal system epithelium | 1.78e-12 | 9 |
intestinal epithelium | 1.78e-12 | 9 |
subdivision of digestive tract | 3.80e-12 | 114 |
organ component layer | 3.94e-12 | 24 |
simple columnar epithelium | 4.51e-12 | 11 |
zone of skin | 1.48e-07 | 5 |
skin epidermis | 1.48e-07 | 5 |
skin of body | 1.48e-07 | 5 |
integument | 1.48e-07 | 5 |
surface | 1.48e-07 | 5 |
outer epithelium | 1.48e-07 | 5 |
integumental system | 1.48e-07 | 5 |
enveloping layer of ectoderm | 1.48e-07 | 5 |