FFCP PHASE1:Mm9::chr16:10128627..10128647,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr16:10128627..10128647,- | |||
|description=CAGE_peak_at_chr16:10128627..10128647,- | |description=CAGE_peak_at_chr16:10128627..10128647,- | ||
|id=chr16:10128627..10128647,- | |id=chr16:10128627..10128647,- | ||
|ontology_enrichment_celltype=CL:0000239!5.20e-10!6;CL:0000677!5.20e-10!6;CL:0000212!5.20e-10!6;CL:0000584!5.20e-10!6;CL:0002563!5.65e-09!9;CL:0002251!5.65e-09!9;CL:0000075!1.64e-08!7;CL:0000473!1.16e-07!3;CL:0000627!1.16e-07!3;CL:0000682!1.16e-07!3 | |ontology_enrichment_celltype=CL:0000239!5.20e-10!6;CL:0000677!5.20e-10!6;CL:0000212!5.20e-10!6;CL:0000584!5.20e-10!6;CL:0002563!5.65e-09!9;CL:0002251!5.65e-09!9;CL:0000075!1.64e-08!7;CL:0000473!1.16e-07!3;CL:0000627!1.16e-07!3;CL:0000682!1.16e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.83e-15,3;CL:0000239,9.28e-15,6;CL:0000677,9.28e-15,6;CL:0000584,9.28e-15,6;CL:0000075,1.11e-12,7;CL:0002563,6.67e-10,9;CL:0002251,6.67e-10,9;CL:0000066,1.32e-09,25;CL:0000473,6.15e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.73e-30!43;UBERON:0005409!2.67e-22!59;UBERON:0000344!2.08e-20!15;UBERON:0001242!1.26e-16!13;UBERON:0000060!1.26e-16!13;UBERON:0001262!1.26e-16!13;UBERON:0004786!1.26e-16!13;UBERON:0004923!1.10e-11!24;UBERON:0003350!5.65e-09!9;UBERON:0004808!5.65e-09!9;UBERON:0001277!5.65e-09!9;UBERON:0001007!2.10e-08!128;UBERON:0001555!2.10e-08!128;UBERON:0007026!2.10e-08!128;UBERON:0004119!3.59e-08!130;UBERON:0000925!3.59e-08!130;UBERON:0006595!3.59e-08!130;UBERON:0000331!1.10e-07!3;UBERON:0002116!1.10e-07!3;UBERON:0001204!1.10e-07!3;UBERON:0001168!1.10e-07!3;UBERON:0000485!3.41e-07!11;UBERON:0004921!5.48e-07!126;UBERON:0004185!5.48e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.30e-31,31;UBERON:0005409,3.11e-20,47;UBERON:0001242,1.29e-19,13;UBERON:0001262,1.29e-19,13;UBERON:0004786,1.29e-19,13;UBERON:0000344,6.44e-17,15;UBERON:0002108,3.32e-12,4;UBERON:0001155,2.12e-11,2;UBERON:0000059,2.12e-11,2;UBERON:0004923,2.53e-10,24;UBERON:0003350,6.67e-10,9;UBERON:0004808,6.67e-10,9;UBERON:0001277,6.67e-10,9;UBERON:0000485,3.97e-08,11;UBERON:0000331,8.07e-08,3;UBERON:0002116,8.07e-08,3;UBERON:0001204,8.07e-08,3;UBERON:0001168,8.07e-08,3;UBERON:0004921,3.67e-07,114;UBERON:0001007,5.31e-07,116;UBERON:0001555,5.31e-07,116;UBERON:0007026,5.31e-07,116;UBERON:0004119,7.58e-07,118;UBERON:0000925,7.58e-07,118;UBERON:0006595,7.58e-07,118 | |||
|phase1_expression=0,10.4692622291808,6.82498859084304,6.0492842261366,7.51343594919521,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,2.8711598205751,2.58457197695445,3.23206849028834,3.23039813075836,6.30075324399827,0.665191531965914,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,9.19645398750929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92130714056255,0.793351699990633,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.570676878337677,6.16887780007865,0.329397909448022,0.251335208800269,0.795825888164603,0.58489226135736,3.59527763461689,5.40345124686736,8.16479220342906,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,10.4692622291808,6.82498859084304,6.0492842261366,7.51343594919521,0.16787927191189,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.91763712426868,2.8711598205751,2.58457197695445,3.23206849028834,3.23039813075836,6.30075324399827,0.665191531965914,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,9.19645398750929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.92130714056255,0.793351699990633,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.570676878337677,6.16887780007865,0.329397909448022,0.251335208800269,0.795825888164603,0.58489226135736,3.59527763461689,5.40345124686736,8.16479220342906,0,0,0,0,0,0.0701358198903186,0.126473074248515,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.95517422270746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0,0,0,0,0,0,0,0,0,0.0846146078916765,0,0,0,0,0,0.0985044823755635,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr16:10128627..10128647,- | |short_description=p@chr16:10128627..10128647,- | ||
}} | }} |
Latest revision as of 00:31, 6 August 2015
Short description: | p@chr16:10128627..10128647, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:10128627..10128647, - |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.83e-15 | 3 |
brush border epithelial cell | 9.28e-15 | 6 |
gut absorptive cell | 9.28e-15 | 6 |
enterocyte | 9.28e-15 | 6 |
columnar/cuboidal epithelial cell | 1.11e-12 | 7 |
intestinal epithelial cell | 6.67e-10 | 9 |
epithelial cell of alimentary canal | 6.67e-10 | 9 |
epithelial cell | 1.32e-09 | 25 |
defensive cell | 6.15e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.30e-31 | 31 |
gastrointestinal system | 3.11e-20 | 47 |
intestinal mucosa | 1.29e-19 | 13 |
wall of intestine | 1.29e-19 | 13 |
gastrointestinal system mucosa | 1.29e-19 | 13 |
mucosa | 6.44e-17 | 15 |
small intestine | 3.32e-12 | 4 |
colon | 2.12e-11 | 2 |
large intestine | 2.12e-11 | 2 |
organ component layer | 2.53e-10 | 24 |
epithelium of mucosa | 6.67e-10 | 9 |
gastrointestinal system epithelium | 6.67e-10 | 9 |
intestinal epithelium | 6.67e-10 | 9 |
simple columnar epithelium | 3.97e-08 | 11 |
ileal mucosa | 8.07e-08 | 3 |
ileum | 8.07e-08 | 3 |
mucosa of small intestine | 8.07e-08 | 3 |
wall of small intestine | 8.07e-08 | 3 |
subdivision of digestive tract | 3.67e-07 | 114 |
digestive system | 5.31e-07 | 116 |
digestive tract | 5.31e-07 | 116 |
primitive gut | 5.31e-07 | 116 |
endoderm-derived structure | 7.58e-07 | 118 |
endoderm | 7.58e-07 | 118 |
presumptive endoderm | 7.58e-07 | 118 |