FFCP PHASE1:Mm9::chr19:45089485..45089496,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=226154 | |EntrezGene=226154 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=195 | |||
|TSSclassifier=NA | |||
|UniProt=Q91YU6 | |UniProt=Q91YU6 | ||
|association_with_transcript=-169bp_to_ENSMUST00000039016,NM_145503,uc008hqn.2_5end | |association_with_transcript=-169bp_to_ENSMUST00000039016,NM_145503,uc008hqn.2_5end | ||
|cluster_id=chr19:45089485..45089496,+ | |||
|description=CAGE_peak_13_at_Lzts2_5end | |description=CAGE_peak_13_at_Lzts2_5end | ||
|id=chr19:45089485..45089496,+ | |id=chr19:45089485..45089496,+ | ||
|ontology_enrichment_celltype=CL:0002563!9.79e-08!9;CL:0002251!9.79e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002250,4.96e-14,3;CL:0002563,2.18e-12,9;CL:0002251,2.18e-12,9;CL:0002076,2.33e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.87e-11!43;UBERON:0005409!1.75e-10!59;UBERON:0000344!3.87e-10!15;UBERON:0001242!8.29e-09!13;UBERON:0000060!8.29e-09!13;UBERON:0001262!8.29e-09!13;UBERON:0004786!8.29e-09!13;UBERON:0003350!9.79e-08!9;UBERON:0004808!9.79e-08!9;UBERON:0001277!9.79e-08!9;UBERON:0004119!1.55e-07!130;UBERON:0000925!1.55e-07!130;UBERON:0006595!1.55e-07!130;UBERON:0004923!4.58e-07!24;UBERON:0001007!6.13e-07!128;UBERON:0001555!6.13e-07!128;UBERON:0007026!6.13e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,4.60e-44,31;UBERON:0005409,7.45e-32,47;UBERON:0001242,2.90e-16,13;UBERON:0001262,2.90e-16,13;UBERON:0004786,2.90e-16,13;UBERON:0000344,5.33e-14,15;UBERON:0003350,2.18e-12,9;UBERON:0004808,2.18e-12,9;UBERON:0001277,2.18e-12,9;UBERON:0004921,1.64e-11,114;UBERON:0001007,2.90e-11,116;UBERON:0001555,2.90e-11,116;UBERON:0007026,2.90e-11,116;UBERON:0004119,5.04e-11,118;UBERON:0000925,5.04e-11,118;UBERON:0006595,5.04e-11,118;UBERON:0000485,4.17e-10,11;UBERON:0001155,1.06e-09,2;UBERON:0000059,1.06e-09,2;UBERON:0004923,1.82e-08,24 | |||
|phase1_expression=0,0.348975407639361,1.36499771816861,2.41971369045464,0.500895729946347,0.671517087647559,0.467225281191051,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0.261199789138935,0.639969691173627,0.68822784320151,0.57423196411502,0.86152399231815,0.861884930743556,1.14014051673824,0.504060259519861,0,0,0,0,1.73310971850765,1.82858109894342,1.42918549383658,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0.251333182659351,0.741584903203122,0.289198713839823,0,0,0,0,1.86391761218122,0.292780797011547,0.41889341362691,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0,0.260240885925407,0,0,0,0,0.12811372028485,0,1.03481348295606,0,0.189106080167819,0,0,0,0,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.329119699826961,0.164167464079095,0.486412857275134,0.146199987425332,0,0.134206418760372,0,0,2.97376904685418,0,0,0,0.128867461322093,1.00841762311671,0.667134131534611,1.33157938278791,0.949058123089023,1.64698954724011,1.75934646160189,0.596869416123452,2.53453313254856,2.69645822596266,1.94524244887225,1.7922714592893,0,0,0,0,0.387904974335251,0.280543279561274,0.442655759869801,0.442830443938806,0.627994911365499,0.370191491765402,0.296452627087149,0,0,0,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0,0,0,0.744281895337007,0.312037673114561,0.757736633841335,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0.476087281772027,0.195133647857799,0.472905432318573,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.63549621259146,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,1.1659233465194,0,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0.41326727862668,0.26175594198403,2.98114438571124,0.621339313086926,0,0,0,0,0,0.337912250981556,0,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0.183151624267265,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0.412070114477788,0,0,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0,0.347652977834566,0.38581844092741,0,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.145346416632329,0.188218760830661,0.507687647350059,0.365855945745545,0,0.543216455383447,0.561142271657738,0,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0,0.463735671240843 | |phase1_expression=0,0.348975407639361,1.36499771816861,2.41971369045464,0.500895729946347,0.671517087647559,0.467225281191051,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,0,0,0.261199789138935,0.639969691173627,0.68822784320151,0.57423196411502,0.86152399231815,0.861884930743556,1.14014051673824,0.504060259519861,0,0,0,0,1.73310971850765,1.82858109894342,1.42918549383658,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0.896053774194671,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0.216491041011214,0,0,0.68510327831436,0,0.148442139064825,0,0,0,0,0,0.251333182659351,0.741584903203122,0.289198713839823,0,0,0,0,1.86391761218122,0.292780797011547,0.41889341362691,1.02182822083437,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0.252722758433675,0,0.260240885925407,0,0,0,0,0.12811372028485,0,1.03481348295606,0,0.189106080167819,0,0,0,0,0,0,0,0.257347907114715,0,0.207125772535502,0,0,0,0,0.154267112887378,0.232533944750408,0,0.116765342367169,0.329119699826961,0.164167464079095,0.486412857275134,0.146199987425332,0,0.134206418760372,0,0,2.97376904685418,0,0,0,0.128867461322093,1.00841762311671,0.667134131534611,1.33157938278791,0.949058123089023,1.64698954724011,1.75934646160189,0.596869416123452,2.53453313254856,2.69645822596266,1.94524244887225,1.7922714592893,0,0,0,0,0.387904974335251,0.280543279561274,0.442655759869801,0.442830443938806,0.627994911365499,0.370191491765402,0.296452627087149,0,0,0,0.202860121388503,0.241177159752417,0.50925170356284,0.287696137450811,0,0,0,0.744281895337007,0.312037673114561,0.757736633841335,0.179397413521912,0,0.184753190166605,0,0,0,0,0,0.476087281772027,0.195133647857799,0.472905432318573,0,0,0,0.172684981865896,0.289298117163023,0,0,0,0.551873492609465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.329940245945071,0,0,0,0.188605079755898,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0.129358683782755,0,0,0,0,0,0.23467170806371,0.63549621259146,0.220528398054962,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,1.1659233465194,0,0,0,0,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0.203319467126849,0.432021363287205,0.209088296014469,0.218362563746178,0.134864346384821,0.41326727862668,0.26175594198403,2.98114438571124,0.621339313086926,0,0,0,0,0,0.337912250981556,0,0.13020438484395,0.314578033277133,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.579568782096571,0,0.183151624267265,0,0,0,0,0,0,0.685082519770642,0,0,0,0,0,0,0.399024873401031,0,0,0,0,0,0.412070114477788,0,0,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0,0.347652977834566,0.38581844092741,0,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.145346416632329,0.188218760830661,0.507687647350059,0.365855945745545,0,0.543216455383447,0.561142271657738,0,0.29551344712669,0,0.154936841185966,0.192906610981141,0,0,0,0.191288332068843,0,0.463735671240843 | ||
|short_description=p13@Lzts2 | |short_description=p13@Lzts2 | ||
}} | }} |
Latest revision as of 20:26, 25 September 2015
Short description: | p13@Lzts2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_Lzts2_5end |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | -169bp_to_ENSMUST00000039016, NM_145503, uc008hqn.2_5end |
EntrezGene: | Lzts2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal crypt stem cell | 4.96e-14 | 3 |
intestinal epithelial cell | 2.18e-12 | 9 |
epithelial cell of alimentary canal | 2.18e-12 | 9 |
endo-epithelial cell | 2.33e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 4.60e-44 | 31 |
gastrointestinal system | 7.45e-32 | 47 |
intestinal mucosa | 2.90e-16 | 13 |
wall of intestine | 2.90e-16 | 13 |
gastrointestinal system mucosa | 2.90e-16 | 13 |
mucosa | 5.33e-14 | 15 |
epithelium of mucosa | 2.18e-12 | 9 |
gastrointestinal system epithelium | 2.18e-12 | 9 |
intestinal epithelium | 2.18e-12 | 9 |
subdivision of digestive tract | 1.64e-11 | 114 |
digestive system | 2.90e-11 | 116 |
digestive tract | 2.90e-11 | 116 |
primitive gut | 2.90e-11 | 116 |
endoderm-derived structure | 5.04e-11 | 118 |
endoderm | 5.04e-11 | 118 |
presumptive endoderm | 5.04e-11 | 118 |
simple columnar epithelium | 4.17e-10 | 11 |
colon | 1.06e-09 | 2 |
large intestine | 1.06e-09 | 2 |
organ component layer | 1.82e-08 | 24 |