FFCP PHASE1:Hg19::chr11:35440654..35440671,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6506 | |EntrezGene=6506 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10940 | |HGNC=10940 | ||
|TSSclassifier=strong | |||
|UniProt=P43004 | |UniProt=P43004 | ||
|association_with_transcript=124bp_to_ENST00000278379_5end | |association_with_transcript=124bp_to_ENST00000278379_5end | ||
|cluster_id=chr11:35440654..35440671,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_10_at_SLC1A2_5end | |description=CAGE_peak_10_at_SLC1A2_5end | ||
|id=chr11:35440654..35440671,- | |id=chr11:35440654..35440671,- | ||
|ontology_enrichment_celltype=CL:0002605!8.62e-09!3 | |ontology_enrichment_celltype=CL:0002605!8.62e-09!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.36e-17;82!UBERON:0010122;4.51e-11;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.53e-117!57;UBERON:0005068!4.53e-117!57;UBERON:0006241!4.53e-117!57;UBERON:0007135!4.53e-117!57;UBERON:0001017!1.13e-103!82;UBERON:0005743!4.27e-102!86;UBERON:0002616!8.23e-99!59;UBERON:0002780!1.66e-98!41;UBERON:0001890!1.66e-98!41;UBERON:0006240!1.66e-98!41;UBERON:0000073!3.39e-98!94;UBERON:0001016!3.39e-98!94;UBERON:0003080!5.68e-96!42;UBERON:0000955!4.39e-94!69;UBERON:0006238!4.39e-94!69;UBERON:0002020!1.59e-89!34;UBERON:0003528!1.59e-89!34;UBERON:0001893!2.13e-89!34;UBERON:0002791!1.27e-86!33;UBERON:0003075!2.81e-84!86;UBERON:0007284!2.81e-84!86;UBERON:0001869!4.43e-84!32;UBERON:0002346!5.18e-80!90;UBERON:0003056!1.78e-70!61;UBERON:0000956!7.49e-64!25;UBERON:0000203!7.49e-64!25;UBERON:0002619!1.52e-56!22;UBERON:0007023!8.16e-54!115;UBERON:0000033!7.72e-53!123;UBERON:0001950!1.66e-50!20;UBERON:0000153!7.71e-50!129;UBERON:0007811!7.71e-50!129;UBERON:0004121!1.69e-49!169;UBERON:0000924!4.57e-48!173;UBERON:0006601!4.57e-48!173;UBERON:0000025!1.56e-27!194;UBERON:0002420!4.06e-27!9;UBERON:0007245!4.06e-27!9;UBERON:0010009!4.06e-27!9;UBERON:0010011!4.06e-27!9;UBERON:0000454!4.06e-27!9;UBERON:0002308!1.86e-26!9;UBERON:0000125!1.86e-26!9;UBERON:0003076!1.36e-21!15;UBERON:0003057!1.36e-21!15;UBERON:0009663!3.56e-21!7;UBERON:0004111!7.37e-21!241;UBERON:0000200!2.83e-19!6;UBERON:0002298!2.68e-17!8;UBERON:0000477!1.15e-16!286;UBERON:0000349!2.64e-16!5;UBERON:0000483!2.87e-16!309;UBERON:0001872!3.71e-16!5;UBERON:0000119!5.45e-16!312;UBERON:0002021!2.33e-15!5;UBERON:0000064!4.60e-15!219;UBERON:0004733!1.19e-14!12;UBERON:0002028!1.19e-14!12;UBERON:0007277!1.19e-14!12;UBERON:0001871!1.81e-14!7;UBERON:0000475!1.87e-13!365;UBERON:0004732!2.05e-13!13;UBERON:0000369!2.89e-13!4;UBERON:0002435!2.89e-13!4;UBERON:0000204!2.89e-13!4;UBERON:0010082!2.89e-13!4;UBERON:0001894!5.58e-11!7;UBERON:0006222!5.58e-11!7;UBERON:0002771!9.41e-11!3;UBERON:0005383!1.29e-10!3;UBERON:0005382!1.29e-10!3;UBERON:0000988!1.12e-09!3;UBERON:0006331!1.55e-09!3;UBERON:0001896!2.09e-09!3;UBERON:0005290!2.09e-09!3;UBERON:0010096!2.09e-09!3;UBERON:0002240!2.35e-09!3;UBERON:0002680!3.59e-08!9;UBERON:0001895!3.59e-08!9;UBERON:0010092!3.59e-08!9;UBERON:0000062!4.33e-08!511;UBERON:0001954!1.09e-07!2;UBERON:0003022!1.09e-07!2;UBERON:0002421!1.09e-07!2;UBERON:0002600!1.09e-07!2;UBERON:0000922!1.19e-07!612;UBERON:0001876!1.20e-07!2;UBERON:0001873!1.28e-07!2;UBERON:0010122!1.28e-07!2;UBERON:0000481!1.72e-07!347;UBERON:0001905!1.81e-07!2;UBERON:0002757!1.81e-07!2;UBERON:0010134!1.81e-07!2;UBERON:0002784!1.81e-07!2;UBERON:0005408!1.81e-07!2;UBERON:0001899!1.81e-07!2;UBERON:0001870!2.12e-07!2;UBERON:0001875!4.45e-07!2;UBERON:0006514!4.45e-07!2;UBERON:0002148!5.67e-07!2;UBERON:0009662!5.67e-07!2;UBERON:0001897!7.90e-07!2;UBERON:0000923!9.09e-07!604;UBERON:0005291!9.09e-07!604;UBERON:0006598!9.09e-07!604;UBERON:0002532!9.09e-07!604;UBERON:0002050!9.85e-07!605;UBERON:0005423!9.85e-07!605 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.31e-84;32!UBERON:0002619;6.37e-82;22!UBERON:0003528;2.93e-79;34!UBERON:0002020;2.93e-79;34!UBERON:0002791;1.35e-78;32!UBERON:0001893;1.70e-78;34!UBERON:0001950;2.45e-72;20!UBERON:0000956;6.12e-72;25!UBERON:0000203;6.12e-72;25!UBERON:0002780;1.28e-69;41!UBERON:0001890;1.28e-69;41!UBERON:0000073;1.27e-53;53!UBERON:0002616;1.27e-53;53!UBERON:0000955;1.04e-41;68!UBERON:0001017;3.87e-37;75!UBERON:0000200;4.53e-30;6!UBERON:0002420;3.18e-26;9!UBERON:0007245;3.18e-26;9!UBERON:0010009;3.18e-26;9!UBERON:0010011;3.18e-26;9!UBERON:0000454;3.18e-26;9!UBERON:0001016;7.09e-26;83!UBERON:0000349;4.22e-25;5!UBERON:0001872;1.20e-24;5!UBERON:0000369;3.19e-20;4!UBERON:0002435;3.19e-20;4!UBERON:0000204;3.19e-20;4!UBERON:0000125;4.22e-19;9!UBERON:0002308;4.22e-19;9!UBERON:0001871;3.50e-18;6!UBERON:0009663;1.70e-17;7!UBERON:0005383;6.99e-16;3!UBERON:0005382;6.99e-16;3!UBERON:0002021;1.01e-15;5!UBERON:0001870;1.04e-15;3!UBERON:0007023;2.61e-15;114!UBERON:0002784;9.19e-12;4!UBERON:0001894;1.48e-11;7!UBERON:0002771;1.55e-11;2!UBERON:0001954;2.33e-11;2!UBERON:0002702;2.33e-11;2!UBERON:0003022;2.33e-11;2!UBERON:0002421;2.33e-11;2!UBERON:0002600;2.33e-11;2!UBERON:0001876;3.69e-11;2!UBERON:0001905;3.69e-11;2!UBERON:0002757;3.69e-11;2!UBERON:0010134;3.69e-11;2!UBERON:0005408;3.69e-11;2!UBERON:0001899;3.69e-11;2!UBERON:0001873;4.51e-11;2!UBERON:0011216;1.01e-10;132!UBERON:0010314;6.05e-09;132!UBERON:0002298;1.19e-07;6!UBERON:0000988;3.03e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,1.10e-99,41;UBERON:0001890,1.10e-99,41;UBERON:0003080,1.10e-99,41;UBERON:0006240,1.10e-99,41;UBERON:0001049,1.20e-98,56;UBERON:0005068,1.20e-98,56;UBERON:0006241,1.20e-98,56;UBERON:0007135,1.20e-98,56;UBERON:0000073,1.68e-98,53;UBERON:0002616,1.68e-98,53;UBERON:0001869,6.92e-96,32;UBERON:0003528,2.85e-90,34;UBERON:0002020,2.85e-90,34;UBERON:0001893,4.46e-90,34;UBERON:0002791,1.09e-88,32;UBERON:0000955,1.50e-84,68;UBERON:0006238,1.50e-84,68;UBERON:0001017,1.75e-83,81;UBERON:0002619,3.85e-82,22;UBERON:0001016,1.28e-74,89;UBERON:0001950,1.43e-72,20;UBERON:0000956,3.93e-72,25;UBERON:0000203,3.93e-72,25;UBERON:0003075,1.40e-65,82;UBERON:0007284,1.40e-65,82;UBERON:0003056,1.83e-65,61;UBERON:0002346,3.03e-62,86;UBERON:0010371,2.24e-50,104;UBERON:0007023,2.06e-49,114;UBERON:0010314,6.34e-41,132;UBERON:0004121,4.86e-36,171;UBERON:0000924,4.86e-36,171;UBERON:0006601,4.86e-36,171;UBERON:0000200,7.91e-30,6;UBERON:0011216,1.17e-27,223;UBERON:0002420,1.95e-26,9;UBERON:0007245,1.95e-26,9;UBERON:0010009,1.95e-26,9;UBERON:0010011,1.95e-26,9;UBERON:0000454,1.95e-26,9;UBERON:0000349,4.45e-25,5;UBERON:0001872,7.70e-25,5;UBERON:0000025,3.55e-24,192;UBERON:0000369,3.20e-20,4;UBERON:0002435,3.20e-20,4;UBERON:0000204,3.20e-20,4;UBERON:0010082,3.20e-20,4;UBERON:0000125,2.70e-19,9;UBERON:0002308,2.70e-19,9;UBERON:0001871,3.27e-18,6;UBERON:0004111,6.22e-18,240;UBERON:0009663,1.29e-17,7;UBERON:0005383,5.45e-16,3;UBERON:0005382,5.45e-16,3;UBERON:0002021,9.40e-16,5;UBERON:0001870,1.34e-15,3;UBERON:0000483,1.59e-12,306;UBERON:0000119,2.47e-12,309;UBERON:0002784,1.65e-11,4;UBERON:0002771,1.72e-11,2;UBERON:0001894,2.24e-11,7;UBERON:0006222,2.24e-11,7;UBERON:0001954,2.46e-11,2;UBERON:0003022,2.46e-11,2;UBERON:0002421,2.46e-11,2;UBERON:0002600,2.46e-11,2;UBERON:0002702,2.73e-11,2;UBERON:0001876,2.87e-11,2;UBERON:0001873,3.17e-11,2;UBERON:0010122,3.17e-11,2;UBERON:0001905,5.53e-11,2;UBERON:0002757,5.53e-11,2;UBERON:0010134,5.53e-11,2;UBERON:0005408,5.53e-11,2;UBERON:0001899,5.53e-11,2;UBERON:0003076,1.16e-07,15;UBERON:0003057,1.16e-07,15;UBERON:0002298,1.31e-07,6;UBERON:0000988,2.76e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,3.79807424308384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.72399471485697,3.9890282209596,0,0,0,0,0,0,0,0,0,0.173624994933292,1.77148277162768,4.34147179051469,0,0.884634079449797,1.47773809476774,4.16832254592548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741412462787447,0,2.81117334870407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,1.12990370390266,0,0,1.32952671507345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,3.81369537112412,0,0,0,0,0,1.70098758642469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,4.51497180137264,3.254964198369,1.14681839138014,0.554645257684261,0.993542447062135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31820246764154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,1.22035527683273,1.41696576325585,3.51194489925733,1.64093091392604,0.504143392443436,1.38314504928436,3.55246420390072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,3.90539049306924,3.51367554052013,1.45856363445986,1.64092442705466,0,0,0,0,2.14280734351315,3.02655349996942,0,0,0,0,0,1.2914249265598,2.76245648963966,0,0,0,3.45654297815204,0,0,0,0,0.500335809236594,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0,0,0,0,0,0.981542335574726,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0.860037498908708,0,2.71965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,1.13776295448085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.72038491523742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,3.79807424308384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.72399471485697,3.9890282209596,0,0,0,0,0,0,0,0,0,0.173624994933292,1.77148277162768,4.34147179051469,0,0.884634079449797,1.47773809476774,4.16832254592548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741412462787447,0,2.81117334870407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0882561266915003,1.12990370390266,0,0,1.32952671507345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80126086612937,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.18091875923721,3.81369537112412,0,0,0,0,0,1.70098758642469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.646414781807753,1.71902382265497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.54427271986794,4.51497180137264,3.254964198369,1.14681839138014,0.554645257684261,0.993542447062135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.31820246764154,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.218419276384028,0,0,0,0,0,0,0,0,0,1.22035527683273,1.41696576325585,3.51194489925733,1.64093091392604,0.504143392443436,1.38314504928436,3.55246420390072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14813893851271,3.90539049306924,3.51367554052013,1.45856363445986,1.64092442705466,0,0,0,0,2.14280734351315,3.02655349996942,0,0,0,0,0,1.2914249265598,2.76245648963966,0,0,0,3.45654297815204,0,0,0,0,0.500335809236594,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439762066981716,0,0,0,0,0,0,0.981542335574726,0.297046400327086,1.2679671827502,0,0,0,0,0,0,0,0,0,0.860037498908708,0,2.71965960763659,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0.829169439458779,1.13776295448085,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p10@SLC1A2 | |short_description=p10@SLC1A2 | ||
}} | }} |
Latest revision as of 20:43, 17 September 2015
Short description: | p10@SLC1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_SLC1A2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 124bp_to_ENST00000278379_5end |
EntrezGene: | SLC1A2 |
HGNC: | 10940 |
UniProt: | P43004 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data