FFCP PHASE1:Hg19::chr11:123430948..123431017,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57476 | |EntrezGene=57476 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29214 | |HGNC=29214 | ||
|TSSclassifier=strong | |||
|UniProt=E9PRD6 | |UniProt=E9PRD6 | ||
|association_with_transcript=0bp_to_ENST00000529432,ENST00000532581,ENST00000534764,uc009zbe.1,uc010rzw.1,uc010rzx.1_5end | |association_with_transcript=0bp_to_ENST00000529432,ENST00000532581,ENST00000534764,uc009zbe.1,uc010rzw.1,uc010rzx.1_5end | ||
|cluster_id=chr11:123430948..123431017,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GRAMD1B_5end | |description=CAGE_peak_1_at_GRAMD1B_5end | ||
|id=chr11:123430948..123431017,+ | |id=chr11:123430948..123431017,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.50e-19;82!UBERON:0006215;9.62e-09;3!UBERON:0010122;6.30e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.91e-48!57;UBERON:0005068!3.91e-48!57;UBERON:0006241!3.91e-48!57;UBERON:0007135!3.91e-48!57;UBERON:0001017!3.29e-43!82;UBERON:0002616!6.30e-43!59;UBERON:0005743!9.39e-42!86;UBERON:0000073!2.34e-41!94;UBERON:0001016!2.34e-41!94;UBERON:0002780!2.65e-39!41;UBERON:0001890!2.65e-39!41;UBERON:0006240!2.65e-39!41;UBERON:0002346!6.96e-39!90;UBERON:0000955!1.71e-38!69;UBERON:0006238!1.71e-38!69;UBERON:0003080!5.45e-38!42;UBERON:0003075!1.06e-37!86;UBERON:0007284!1.06e-37!86;UBERON:0001893!2.51e-32!34;UBERON:0002020!2.54e-32!34;UBERON:0003528!2.54e-32!34;UBERON:0002791!3.27e-31!33;UBERON:0001869!8.35e-31!32;UBERON:0007023!8.28e-30!115;UBERON:0003056!6.55e-29!61;UBERON:0002619!2.00e-27!22;UBERON:0001950!3.91e-25!20;UBERON:0000956!4.15e-23!25;UBERON:0000203!4.15e-23!25;UBERON:0000033!9.88e-23!123;UBERON:0000153!2.75e-22!129;UBERON:0007811!2.75e-22!129;UBERON:0000924!3.40e-21!173;UBERON:0006601!3.40e-21!173;UBERON:0004121!4.36e-20!169;UBERON:0000025!3.07e-18!194;UBERON:0000475!1.54e-13!365;UBERON:0000119!2.66e-12!312;UBERON:0000483!3.15e-12!309;UBERON:0004111!7.46e-12!241;UBERON:0003076!4.46e-11!15;UBERON:0003057!4.46e-11!15;UBERON:0002420!5.48e-11!9;UBERON:0007245!5.48e-11!9;UBERON:0010009!5.48e-11!9;UBERON:0010011!5.48e-11!9;UBERON:0000454!5.48e-11!9;UBERON:0002308!1.20e-10!9;UBERON:0000125!1.20e-10!9;UBERON:0001871!1.66e-10!7;UBERON:0000477!3.80e-10!286;UBERON:0000467!8.76e-09!625;UBERON:0000480!1.07e-08!626;UBERON:0009663!1.23e-08!7;UBERON:0000200!1.54e-08!6;UBERON:0004733!1.70e-08!12;UBERON:0002028!1.70e-08!12;UBERON:0007277!1.70e-08!12;UBERON:0001894!2.66e-08!7;UBERON:0006222!2.66e-08!7;UBERON:0000062!3.38e-08!511;UBERON:0000468!6.11e-08!659;UBERON:0000481!1.10e-07!347;UBERON:0004732!1.30e-07!13;UBERON:0000922!1.35e-07!612;UBERON:0000064!2.06e-07!219;UBERON:0000923!2.12e-07!604;UBERON:0005291!2.12e-07!604;UBERON:0006598!2.12e-07!604;UBERON:0002532!2.12e-07!604;UBERON:0000349!2.34e-07!5;UBERON:0002050!2.55e-07!605;UBERON:0005423!2.55e-07!605;UBERON:0001872!3.01e-07!5;UBERON:0002021!3.70e-07!5;UBERON:0002298!8.29e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.07e-64;32!UBERON:0002619;4.94e-62;22!UBERON:0001893;5.46e-62;34!UBERON:0003528;5.52e-62;34!UBERON:0002020;5.52e-62;34!UBERON:0002791;9.32e-61;32!UBERON:0002780;9.72e-61;41!UBERON:0001890;9.72e-61;41!UBERON:0001950;1.19e-56;20!UBERON:0000073;1.31e-55;53!UBERON:0002616;1.31e-55;53!UBERON:0000956;4.63e-54;25!UBERON:0000203;4.63e-54;25!UBERON:0000955;5.67e-38;68!UBERON:0001017;1.33e-36;75!UBERON:0001016;1.80e-30;83!UBERON:0002420;1.02e-19;9!UBERON:0007245;1.02e-19;9!UBERON:0010009;1.02e-19;9!UBERON:0010011;1.02e-19;9!UBERON:0000454;1.02e-19;9!UBERON:0001871;1.26e-19;6!UBERON:0000125;5.47e-19;9!UBERON:0002308;5.47e-19;9!UBERON:0000200;8.65e-18;6!UBERON:0004733;2.21e-16;12!UBERON:0002028;2.21e-16;12!UBERON:0002298;2.08e-15;6!UBERON:0000349;4.81e-15;5!UBERON:0004732;5.53e-15;13!UBERON:0001872;8.67e-15;5!UBERON:0007023;1.00e-14;114!UBERON:0002021;1.43e-14;5!UBERON:0009663;2.30e-14;7!UBERON:0001894;4.18e-13;7!UBERON:0000369;3.23e-12;4!UBERON:0002435;3.23e-12;4!UBERON:0000204;3.23e-12;4!UBERON:0011216;6.65e-12;132!UBERON:0002680;2.95e-10;9!UBERON:0001895;2.95e-10;9!UBERON:0001870;8.33e-10;3!UBERON:0005383;1.26e-09;3!UBERON:0005382;1.26e-09;3!UBERON:0000988;1.06e-08;3!UBERON:0010314;1.92e-08;132!UBERON:0001896;2.15e-08;3!UBERON:0005290;2.15e-08;3!UBERON:0002702;3.15e-07;2!UBERON:0001876;3.44e-07;2!UBERON:0002771;4.60e-07;2!UBERON:0001954;6.21e-07;2!UBERON:0003022;6.21e-07;2!UBERON:0002421;6.21e-07;2!UBERON:0002600;6.21e-07;2!UBERON:0001873;6.30e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.53e-102,56;UBERON:0005068,1.53e-102,56;UBERON:0006241,1.53e-102,56;UBERON:0007135,1.53e-102,56;UBERON:0000073,8.32e-100,53;UBERON:0002616,8.32e-100,53;UBERON:0001017,5.71e-86,81;UBERON:0000955,3.11e-85,68;UBERON:0006238,3.11e-85,68;UBERON:0002780,2.85e-84,41;UBERON:0001890,2.85e-84,41;UBERON:0003080,2.85e-84,41;UBERON:0006240,2.85e-84,41;UBERON:0001016,3.53e-82,89;UBERON:0001869,3.08e-72,32;UBERON:0003075,3.89e-72,82;UBERON:0007284,3.89e-72,82;UBERON:0001893,4.18e-72,34;UBERON:0003528,4.28e-72,34;UBERON:0002020,4.28e-72,34;UBERON:0002346,3.40e-68,86;UBERON:0002791,3.10e-67,32;UBERON:0002619,4.90e-62,22;UBERON:0010371,6.02e-59,104;UBERON:0001950,1.19e-56,20;UBERON:0003056,1.37e-56,61;UBERON:0000956,4.60e-54,25;UBERON:0000203,4.60e-54,25;UBERON:0007023,1.34e-44,114;UBERON:0010314,6.76e-44,132;UBERON:0004121,4.42e-43,171;UBERON:0000924,4.42e-43,171;UBERON:0006601,4.42e-43,171;UBERON:0011216,9.73e-30,223;UBERON:0000025,9.56e-26,192;UBERON:0002420,1.05e-19,9;UBERON:0007245,1.05e-19,9;UBERON:0010009,1.05e-19,9;UBERON:0010011,1.05e-19,9;UBERON:0000454,1.05e-19,9;UBERON:0001871,1.35e-19,6;UBERON:0003076,4.43e-19,15;UBERON:0003057,4.43e-19,15;UBERON:0000125,5.55e-19,9;UBERON:0002308,5.55e-19,9;UBERON:0004111,5.79e-19,240;UBERON:0000200,8.66e-18,6;UBERON:0004733,2.15e-16,12;UBERON:0002028,2.15e-16,12;UBERON:0007277,2.15e-16,12;UBERON:0002298,1.98e-15,6;UBERON:0000483,4.25e-15,306;UBERON:0000349,4.75e-15,5;UBERON:0004732,5.39e-15,13;UBERON:0000119,8.12e-15,309;UBERON:0001872,8.56e-15,5;UBERON:0002021,1.37e-14,5;UBERON:0009663,2.35e-14,7;UBERON:0001894,3.58e-13,7;UBERON:0006222,3.58e-13,7;UBERON:0000369,3.28e-12,4;UBERON:0002435,3.28e-12,4;UBERON:0000204,3.28e-12,4;UBERON:0010082,3.28e-12,4;UBERON:0002680,2.98e-10,9;UBERON:0001895,2.98e-10,9;UBERON:0010092,2.98e-10,9;UBERON:0001870,8.34e-10,3;UBERON:0005383,1.28e-09,3;UBERON:0005382,1.28e-09,3;UBERON:0000988,1.06e-08,3;UBERON:0001896,2.04e-08,3;UBERON:0005290,2.04e-08,3;UBERON:0010096,2.04e-08,3;UBERON:0000923,2.03e-07,560;UBERON:0010316,2.03e-07,560;UBERON:0005291,2.03e-07,560;UBERON:0006598,2.03e-07,560;UBERON:0010317,2.03e-07,560;UBERON:0002532,2.03e-07,560;UBERON:0002050,2.96e-07,564;UBERON:0002702,3.15e-07,2;UBERON:0001876,3.44e-07,2;UBERON:0002771,4.60e-07,2;UBERON:0001954,6.12e-07,2;UBERON:0003022,6.12e-07,2;UBERON:0002421,6.12e-07,2;UBERON:0002600,6.12e-07,2;UBERON:0001873,6.48e-07,2;UBERON:0010122,6.48e-07,2 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0.309706370895104,0.28769239232215,0.256160706529101,0,0,0,0,0,0.272906150057846,0,0,0,0,0.329851300186716,0,0,0,0,0,0.502497330513487,1.5644487552606,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04535523804977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0.283604451492204,0,0.087834785693126,4.32230949142452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662045904066094,0,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0.312160076830321,0,0,0,0.161872944368132,0,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0,0,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0.103052529238439,0,0,0.168776332241266,0.0974370051611986,0,0.368199594569197,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0,0,0,0.463721619900307,0.234817388471643,0,0,0,0,0,0,0,0,0,0.16798212819886,0.141775097242386,0,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0,0.43596006883328,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,0,0,0.205476322550383,0,0,0,0,0,0.76228387266739,2.60279707715243,0,1.50764638800914,0.637938751653163,0,0,0,0,0,0,0,0,0,0.117141414992713,0,2.27407504055985,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0.321707842287215,0,0,0,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0,0.54941678891006,0.330037999682352,0,0,4.82051789532479,0.096670718292122,0,0,0,0,0,0,0.178064071293475,0,0,0.127612712494584,0.2023155617111,0.464845549297286,0.62962469366128,0.6970372701606,0,0,0.869932992075073,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0.274537029736055,0,0.202182481573316,0,0.421258456238981,0,0.487426979262569,0,0,0,1.13008116620243,1.10273068709225,1.32687795048244,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.7893153195867,41.6381472575118,0,0,0,0.19924798825107,0.276283915531148,0.503865495708552,0,0,0.311039587661807,0,0,0,0,0,0,11.6319929531426,19.6668368103125,21.9575177801314,0,0,0,0,0,0,1.37897349296586,0,0.173624994933292,21.2577932595321,33.7670028151142,4.5774520895125,17.8032608489272,5.6154047601174,13.6018946235463,0,0,0.0769502585037971,0,0,0.0897576444097721,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42644078730437,0,10.5419000576403,0,0,0,0,1.20990716048664,12.5489832268501,0.568679216656392,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0,0,4.06765333404958,0,0,22.9185081360281,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,8.40588404193705,7.52979583905962,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,19.8807422452326,36.6387162440138,0,0,0,0,0,29.7672827624321,0,0.157611414598396,0.209818352539992,0,0,0,0.714695326373367,0,0,0,0,0.326587360109409,0,0,0,0,0,0,5.81773303626977,8.46288651153216,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,39.8730680985144,23.5510691260789,42.6901073709165,3.44045517414043,4.43716206147409,4.90561583236929,0,0,0,0,0,1.40500471742064,1.30428925749743,0.149254802886874,0.233713309847224,0,0.568209015825267,0,0,0.457680136793847,0.453692771289717,0,0,0,0,0.155262956876259,0.829412415681711,0,0,0,0,0,0,0.214821114084977,0.464033759878494,0,0,0.343395705182793,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0.168942440653073,0,0,0,45.6252839300711,0,0,0.163565394255844,0,0,0,0,0,0,0,0.184105950251841,0,1.24415452006595,2.30209868346573,0,0.471797825567689,1.09209638192014,0.509197589862076,0.425149840203366,0.123935764259002,0.558644917973244,0,0,0.80057074828547,0.705351887381368,0,25.3063146880051,34.0071783181404,31.4478702342588,17.6400073247049,8.57043767153842,26.6946994511881,30.0344700875243,0,0,0,0,0,0,0,0,0.225630985047772,0,0,0.261906694481422,0,0,21.3418767394127,26.5566553528708,43.1975404687475,29.298104309585,9.29857175330973,0,0,0,0,1.60710550763486,0.672567444437648,4.85572483389305,3.18727067891817,0,0,0,7.34073116149782,27.4272465757081,0,0,0,30.3233088537884,0,0,0,0,1.78691360441641,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,0.513314034281235,0,0,0,2.18845852677505,0.83244063544298,0,0.219881033490858,0.603851374266694,0,0,0,0,0.942706188406504,3.92616934229891,0.594092800654172,4.6492130034174,0,0,0.128915775947154,0,0,0,0,0,0,0.286679166302903,0,26.5166811744567,9.16336449714793,0,0.371995018166751,0,0,0,0,0,0.101988829741982,0,0,0,0.833565680400634,0.803892390468535,9.12086383404657,10.3432995861895,0,0.952257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| ||
|short_description=p1@GRAMD1B | |short_description=p1@GRAMD1B | ||
}} | }} |
Latest revision as of 09:57, 16 September 2015
Short description: | p1@GRAMD1B |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRAMD1B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000529432, ENST00000532581, ENST00000534764, uc009zbe.1, uc010rzw.1, uc010rzx.1_5end |
EntrezGene: | GRAMD1B |
HGNC: | 29214 |
UniProt: | E9PRD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data