FFCP PHASE1:Hg19::chr11:116703478..116703486,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=345 | |EntrezGene=345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=610 | |HGNC=610 | ||
|TSSclassifier=strong | |||
|UniProt=P02656 | |UniProt=P02656 | ||
|association_with_transcript=-45bp_to_V01513_5end | |association_with_transcript=-45bp_to_V01513_5end | ||
|cluster_id=chr11:116703478..116703486,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_6_at_APOC3_5end | |description=CAGE_peak_6_at_APOC3_5end | ||
|id=chr11:116703478..116703486,+ | |id=chr11:116703478..116703486,+ | ||
|ontology_enrichment_celltype=CL:0000181!5.61e-19!12;CL:0000417!5.61e-19!12;CL:0000668!5.61e-19!12;CL:0000414!5.61e-19!12;CL:0000412!5.61e-19!12;CL:0000182!5.61e-19!12;CL:0000223!8.03e-07!59 | |ontology_enrichment_celltype=CL:0000181!5.61e-19!12;CL:0000417!5.61e-19!12;CL:0000668!5.61e-19!12;CL:0000414!5.61e-19!12;CL:0000412!5.61e-19!12;CL:0000182!5.61e-19!12;CL:0000223!8.03e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.35e-14;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.30e-14,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.54e-07;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.02e-23!19;UBERON:0006925!5.02e-23!19;UBERON:0008836!5.02e-23!19;UBERON:0008835!8.53e-20!22;UBERON:0003894!8.53e-20!22;UBERON:0009854!6.62e-19!23;UBERON:0007499!2.44e-17!25;UBERON:0009497!2.44e-17!25;UBERON:0000015!2.44e-17!25;UBERON:0002423!2.44e-17!25;UBERON:0006235!2.44e-17!25;UBERON:0004161!2.44e-17!25;UBERON:0005057!1.21e-16!26;UBERON:0009856!1.21e-16!26;UBERON:0002365!7.59e-14!31;UBERON:0002330!7.59e-14!31;UBERON:0004921!2.81e-13!129;UBERON:0004185!2.81e-13!129;UBERON:0003929!1.87e-12!54;UBERON:0002368!3.51e-12!35;UBERON:0005409!1.24e-11!35;UBERON:0000160!2.90e-11!27;UBERON:0001007!1.21e-10!155;UBERON:0001555!1.21e-10!155;UBERON:0007026!1.21e-10!155;UBERON:0004119!1.47e-09!169;UBERON:0000925!1.47e-09!169;UBERON:0006595!1.47e-09!169;UBERON:0000949!2.62e-09!45;UBERON:0002530!6.04e-09!59;UBERON:0005911!9.07e-08!82;UBERON:0005172!1.77e-07!55;UBERON:0005173!1.77e-07!55 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;5.35e-24;19!UBERON:0006925;5.35e-24;19!UBERON:0002423;2.75e-18;25!UBERON:0002108;2.70e-15;4!UBERON:0002365;9.66e-15;31!UBERON:0002330;9.66e-15;31!UBERON:0002368;8.38e-13;33!UBERON:0000160;1.42e-09;17!UBERON:0000949;2.44e-09;43!UBERON:0005409;1.29e-07;22!UBERON:0001007;2.07e-07;81!UBERON:0000922;3.02e-07;49!UBERON:0002114;3.06e-07;2!UBERON:0005172;8.24e-07;52!UBERON:0005173;8.24e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,4.86e-24,19;UBERON:0006925,4.86e-24,19;UBERON:0008836,4.86e-24,19;UBERON:0008835,8.62e-21,22;UBERON:0003894,8.62e-21,22;UBERON:0009854,6.78e-20,23;UBERON:0007499,2.56e-18,25;UBERON:0009497,2.56e-18,25;UBERON:0000015,2.56e-18,25;UBERON:0002423,2.56e-18,25;UBERON:0006235,2.56e-18,25;UBERON:0004161,2.56e-18,25;UBERON:0009856,1.28e-17,26;UBERON:0002108,3.12e-15,4;UBERON:0002365,8.40e-15,31;UBERON:0002330,8.40e-15,31;UBERON:0002368,4.01e-13,35;UBERON:0000949,3.18e-10,45;UBERON:0000160,1.49e-09,17;UBERON:0004921,2.98e-09,118;UBERON:0003929,1.58e-08,54;UBERON:0005172,1.58e-08,54;UBERON:0005173,1.58e-08,54;UBERON:0002530,8.35e-08,59;UBERON:0002417,1.13e-07,60;UBERON:0000916,1.13e-07,60;UBERON:0001007,1.95e-07,145;UBERON:0001555,1.95e-07,145;UBERON:0007026,1.95e-07,145;UBERON:0002114,3.35e-07,2;UBERON:0005409,8.71e-07,25 | |||
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|short_description=p6@APOC3 | |short_description=p6@APOC3 | ||
}} | }} |
Latest revision as of 19:35, 15 September 2015
Short description: | p6@APOC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_APOC3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -45bp_to_V01513_5end |
EntrezGene: | APOC3 |
HGNC: | 610 |
UniProt: | P02656 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.30e-14 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 4.86e-24 | 19 |
digestive gland | 4.86e-24 | 19 |
liver bud | 4.86e-24 | 19 |
hepatic diverticulum | 8.62e-21 | 22 |
liver primordium | 8.62e-21 | 22 |
digestive tract diverticulum | 6.78e-20 | 23 |
epithelial sac | 2.56e-18 | 25 |
epithelium of foregut-midgut junction | 2.56e-18 | 25 |
anatomical boundary | 2.56e-18 | 25 |
hepatobiliary system | 2.56e-18 | 25 |
foregut-midgut junction | 2.56e-18 | 25 |
septum transversum | 2.56e-18 | 25 |
sac | 1.28e-17 | 26 |
small intestine | 3.12e-15 | 4 |
exocrine gland | 8.40e-15 | 31 |
exocrine system | 8.40e-15 | 31 |
endocrine gland | 4.01e-13 | 35 |
endocrine system | 3.18e-10 | 45 |
intestine | 1.49e-09 | 17 |
subdivision of digestive tract | 2.98e-09 | 118 |
gut epithelium | 1.58e-08 | 54 |
abdomen element | 1.58e-08 | 54 |
abdominal segment element | 1.58e-08 | 54 |
gland | 8.35e-08 | 59 |
abdominal segment of trunk | 1.13e-07 | 60 |
abdomen | 1.13e-07 | 60 |
digestive system | 1.95e-07 | 145 |
digestive tract | 1.95e-07 | 145 |
primitive gut | 1.95e-07 | 145 |
duodenum | 3.35e-07 | 2 |
gastrointestinal system | 8.71e-07 | 25 |