FFCP PHASE1:Mm9::chr15:100467701..100467712,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=207818 | |EntrezGene=207818 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=Q99KC7 | |UniProt=Q99KC7 | ||
|association_with_transcript=-405bp_to_ENSMUST00000172334,NM_001033872,uc007xrv.1_5end | |association_with_transcript=-405bp_to_ENSMUST00000172334,NM_001033872,uc007xrv.1_5end | ||
|cluster_id=chr15:100467701..100467712,- | |||
|description=CAGE_peak_9_at_Smagp_5end | |description=CAGE_peak_9_at_Smagp_5end | ||
|id=chr15:100467701..100467712,- | |id=chr15:100467701..100467712,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002092,4.98e-22,3;CL:0002540,4.98e-22,3;CL:0000349,7.30e-21,3;CL:0000351,7.30e-21,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000358,7.30e-21,3;UBERON:0000307,7.30e-21,3;UBERON:0007010,7.30e-21,3;UBERON:0001987,1.96e-14,2;UBERON:0003124,1.96e-14,2;UBERON:0004340,1.96e-14,2;UBERON:0000014,7.32e-13,5;UBERON:0001003,7.32e-13,5;UBERON:0002097,7.32e-13,5;UBERON:0002199,7.32e-13,5;UBERON:0007029,7.32e-13,5;UBERON:0007376,7.32e-13,5;UBERON:0002416,7.32e-13,5;UBERON:0007383,7.32e-13,5;UBERON:0005631,6.17e-10,3;UBERON:0000478,6.17e-10,3;UBERON:0000158,6.17e-10,3;UBERON:0005795,1.14e-07,4;UBERON:0000995,1.14e-07,4;UBERON:0002371,3.11e-07,16;UBERON:0004175,3.25e-07,9 | |||
|phase1_expression=0,0.348975407639361,0.454999239389536,0.60492842261366,0,0.839396359559449,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.22940928106717,0,0.86152399231815,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,5.84934816232909,10.8775299882367,7.8152812644071,1.19840044207362,0.384218305321555,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0,0,0,0.860423876981386,0,0.539703191637817,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0.766371165625774,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,1.0108910337347,0.631325567659422,0,0,0,0,0,0.12811372028485,0,0,0,0,0.175951124163949,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.379335801906163,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.592905254174298,0.166845105716094,0,0,0.405720242777006,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.757736633841335,0.717589654087649,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0.428674070063185,0,0.356737635204141,0.329098041204242,0,1.40803024838226,1.69465656691056,0.220528398054962,1.6488625294148,0.968786560175433,0.663442174209714,1.43246812803764,2.1338316966858,0,0,0.341741761595705,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.269728692769641,0.0826534557253359,0.785267825952089,0.777689839750757,0,0,0,0.165458490457098,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,1.33191572024439,2.51198798506532,1.51096154727671,0,0.563047426353546,0,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.229741875822453,0,0,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.436039249896986,0.376437521661322,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | |phase1_expression=0,0.348975407639361,0.454999239389536,0.60492842261366,0,0.839396359559449,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0,0,0,0.0850432901510698,0,0,0.319984845586813,0.22940928106717,0,0.86152399231815,0.215471232685889,0,0.252030129759931,0.221730510655305,0,0,0,0.577703239502549,0.166234645358492,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,5.84934816232909,10.8775299882367,7.8152812644071,1.19840044207362,0.384218305321555,0,0,0.210324961351382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284743361598206,0,0,0,0,0.860423876981386,0,0.539703191637817,0.649776417447669,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.517875767294343,0.148442139064825,0.173485326766136,0,0,0.301445281105245,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,0,0,0.766371165625774,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0.248813941220186,1.0108910337347,0.631325567659422,0,0,0,0,0,0.12811372028485,0,0,0,0,0.175951124163949,0.657587197282725,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0,0,0.219550115291051,0,0,0,0.330418782983798,0.264450566663544,0,0,0,0,0,0,0,0,0,0.397912944082302,0.38992817423824,0,0.432276099749388,0.199141273254367,0.379335801906163,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0.592905254174298,0.166845105716094,0,0,0.405720242777006,0.241177159752417,0,0.287696137450811,0.324270453550071,0.274561413188081,0,0,0.312037673114561,0.757736633841335,0.717589654087649,0,0.369506380333209,0,0,0,0,0,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307435147943927,0,0,0,0.316036757935816,0,0,0,0,0,0.428674070063185,0,0.356737635204141,0.329098041204242,0,1.40803024838226,1.69465656691056,0.220528398054962,1.6488625294148,0.968786560175433,0.663442174209714,1.43246812803764,2.1338316966858,0,0,0.341741761595705,0.206386867963223,0,0,0.136694227721025,0.228778173206523,0,0,0,0.954670618015114,0,0.203319467126849,0.108005340821801,0.209088296014469,0,0.269728692769641,0.0826534557253359,0.785267825952089,0.777689839750757,0,0,0,0.165458490457098,0,0,0,0,0,0.104859344425711,0,0.288030006257865,0,0,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0.453460767230423,1.33191572024439,2.51198798506532,1.51096154727671,0,0.563047426353546,0,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0,0.188626341386076,0,0.128050304809739,0.229741875822453,0,0,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0,0,0.436039249896986,0.376437521661322,0.0846146078916765,0,0.526139422875686,0.135804113845862,0,0.355905054372522,0.197008964751127,0,0,0.192906610981141,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | ||
|short_description=p9@Smagp | |short_description=p9@Smagp | ||
}} | }} |
Latest revision as of 12:20, 26 September 2015
Short description: | p9@Smagp |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Smagp_5end |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | -405bp_to_ENSMUST00000172334, NM_001033872, uc007xrv.1_5end |
EntrezGene: | Smagp |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow cell | 4.98e-22 | 3 |
mesenchymal stem cell of the bone marrow | 4.98e-22 | 3 |
extraembryonic cell | 7.30e-21 | 3 |
trophoblast cell | 7.30e-21 | 3 |
Ontology term | p-value | n |
---|---|---|
blastocyst | 7.30e-21 | 3 |
blastula | 7.30e-21 | 3 |
cleaving embryo | 7.30e-21 | 3 |
placenta | 1.96e-14 | 2 |
chorion | 1.96e-14 | 2 |
allantois | 1.96e-14 | 2 |
zone of skin | 7.32e-13 | 5 |
skin epidermis | 7.32e-13 | 5 |
skin of body | 7.32e-13 | 5 |
integument | 7.32e-13 | 5 |
surface | 7.32e-13 | 5 |
outer epithelium | 7.32e-13 | 5 |
integumental system | 7.32e-13 | 5 |
enveloping layer of ectoderm | 7.32e-13 | 5 |
extraembryonic membrane | 6.17e-10 | 3 |
extraembryonic structure | 6.17e-10 | 3 |
membranous layer | 6.17e-10 | 3 |
embryonic uterus | 1.14e-07 | 4 |
uterus | 1.14e-07 | 4 |
bone marrow | 3.11e-07 | 16 |
internal genitalia | 3.25e-07 | 9 |