FFCP PHASE1:Hg19::chr10:18689582..18689627,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=783 | |EntrezGene=783 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1402 | |HGNC=1402 | ||
|TSSclassifier=strong | |||
|UniProt=Q08289,Q5VVH1 | |UniProt=Q08289,Q5VVH1 | ||
|association_with_transcript=69bp_to_NM_201570,uc001iqa.2,uc010qcn.1,uc010qco.1_5end | |association_with_transcript=69bp_to_NM_201570,uc001iqa.2,uc010qcn.1,uc010qco.1_5end | ||
|cluster_id=chr10:18689582..18689627,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_CACNB2_5end | |description=CAGE_peak_2_at_CACNB2_5end | ||
|id=chr10:18689582..18689627,+ | |id=chr10:18689582..18689627,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.04e-15;82!UBERON:0006215;2.25e-12;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.95e-50!57;UBERON:0005068!2.95e-50!57;UBERON:0006241!2.95e-50!57;UBERON:0007135!2.95e-50!57;UBERON:0007023!1.65e-46!115;UBERON:0001017!4.54e-46!82;UBERON:0002616!1.18e-45!59;UBERON:0000955!1.77e-45!69;UBERON:0006238!1.77e-45!69;UBERON:0005743!4.18e-45!86;UBERON:0000073!2.74e-41!94;UBERON:0001016!2.74e-41!94;UBERON:0002780!3.06e-41!41;UBERON:0001890!3.06e-41!41;UBERON:0006240!3.06e-41!41;UBERON:0003080!4.99e-40!42;UBERON:0002346!1.50e-38!90;UBERON:0003075!2.00e-37!86;UBERON:0007284!2.00e-37!86;UBERON:0001893!3.31e-33!34;UBERON:0002020!3.80e-33!34;UBERON:0003528!3.80e-33!34;UBERON:0001869!5.03e-33!32;UBERON:0001950!1.85e-32!20;UBERON:0002619!2.48e-32!22;UBERON:0002791!1.73e-31!33;UBERON:0003056!6.25e-28!61;UBERON:0000956!8.06e-28!25;UBERON:0000203!8.06e-28!25;UBERON:0000153!4.02e-26!129;UBERON:0007811!4.02e-26!129;UBERON:0000033!1.64e-25!123;UBERON:0000924!3.87e-22!173;UBERON:0006601!3.87e-22!173;UBERON:0004121!4.81e-21!169;UBERON:0000025!7.91e-14!194;UBERON:0000064!8.60e-14!219;UBERON:0004732!2.24e-13!13;UBERON:0000200!4.80e-13!6;UBERON:0001871!2.60e-12!7;UBERON:0004733!6.86e-12!12;UBERON:0002028!6.86e-12!12;UBERON:0007277!6.86e-12!12;UBERON:0000477!2.41e-11!286;UBERON:0003076!3.48e-11!15;UBERON:0003057!3.48e-11!15;UBERON:0004111!3.63e-11!241;UBERON:0000481!7.09e-11!347;UBERON:0000483!1.48e-10!309;UBERON:0002021!1.67e-10!5;UBERON:0000119!2.72e-10!312;UBERON:0001894!2.16e-09!7;UBERON:0006222!2.16e-09!7;UBERON:0000062!2.50e-08!511;UBERON:0002298!4.40e-08!8;UBERON:0000369!8.20e-08!4;UBERON:0002435!8.20e-08!4;UBERON:0000204!8.20e-08!4;UBERON:0010082!8.20e-08!4;UBERON:0000475!1.01e-07!365;UBERON:0002680!1.06e-07!9;UBERON:0001895!1.06e-07!9;UBERON:0010092!1.06e-07!9;UBERON:0002771!2.30e-07!3;UBERON:0001872!2.75e-07!5;UBERON:0002420!2.95e-07!9;UBERON:0007245!2.95e-07!9;UBERON:0010009!2.95e-07!9;UBERON:0010011!2.95e-07!9;UBERON:0000454!2.95e-07!9;UBERON:0002308!4.95e-07!9;UBERON:0000125!4.95e-07!9;UBERON:0000349!7.43e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.43e-51;22!UBERON:0001950;1.07e-50;20!UBERON:0000956;7.24e-45;25!UBERON:0000203;7.24e-45;25!UBERON:0001869;2.80e-38;32!UBERON:0003528;2.81e-37;34!UBERON:0002020;2.81e-37;34!UBERON:0000073;6.69e-37;53!UBERON:0002616;6.69e-37;53!UBERON:0001893;1.04e-35;34!UBERON:0002780;2.04e-34;41!UBERON:0001890;2.04e-34;41!UBERON:0002791;6.16e-34;32!UBERON:0000955;1.29e-27;68!UBERON:0000200;1.10e-23;6!UBERON:0001017;2.76e-23;75!UBERON:0004732;7.81e-21;13!UBERON:0001016;2.31e-19;83!UBERON:0004733;4.38e-18;12!UBERON:0002028;4.38e-18;12!UBERON:0002298;2.80e-14;6!UBERON:0002680;2.91e-14;9!UBERON:0001895;2.91e-14;9!UBERON:0001871;7.26e-14;6!UBERON:0001872;5.60e-13;5!UBERON:0001870;5.61e-13;3!UBERON:0002021;6.22e-13;5!UBERON:0007023;1.15e-12;114!UBERON:0001894;2.33e-12;7!UBERON:0000349;3.50e-12;5!UBERON:0000988;4.32e-11;3!UBERON:0011216;2.38e-09;132!UBERON:0002702;3.31e-09;2!UBERON:0002771;4.80e-09;2!UBERON:0003296;1.35e-08;4!UBERON:0010133;1.35e-08;4!UBERON:0002784;1.35e-08;4!UBERON:0001876;1.58e-08;2!UBERON:0001905;2.97e-08;2!UBERON:0002757;2.97e-08;2!UBERON:0010134;2.97e-08;2!UBERON:0005408;2.97e-08;2!UBERON:0001899;2.97e-08;2!UBERON:0002148;8.67e-08;2!UBERON:0006331;8.67e-08;2!UBERON:0009662;8.67e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.49e-68,53;UBERON:0002616,1.49e-68,53;UBERON:0001049,1.66e-64,56;UBERON:0005068,1.66e-64,56;UBERON:0006241,1.66e-64,56;UBERON:0007135,1.66e-64,56;UBERON:0000955,9.78e-62,68;UBERON:0006238,9.78e-62,68;UBERON:0001017,4.43e-57,81;UBERON:0001016,1.80e-53,89;UBERON:0002619,2.47e-51,22;UBERON:0002780,5.09e-51,41;UBERON:0001890,5.09e-51,41;UBERON:0003080,5.09e-51,41;UBERON:0006240,5.09e-51,41;UBERON:0001950,9.90e-51,20;UBERON:0000956,7.35e-45,25;UBERON:0000203,7.35e-45,25;UBERON:0003075,2.03e-44,82;UBERON:0007284,2.03e-44,82;UBERON:0003528,8.93e-44,34;UBERON:0002020,8.93e-44,34;UBERON:0001869,8.59e-43,32;UBERON:0002346,5.50e-42,86;UBERON:0001893,4.83e-40,34;UBERON:0007023,5.81e-39,114;UBERON:0002791,2.07e-38,32;UBERON:0010371,1.22e-35,104;UBERON:0003056,3.45e-35,61;UBERON:0010314,3.88e-28,132;UBERON:0004121,1.93e-25,171;UBERON:0000924,1.93e-25,171;UBERON:0006601,1.93e-25,171;UBERON:0011216,7.21e-25,223;UBERON:0000200,1.08e-23,6;UBERON:0004732,7.08e-21,13;UBERON:0004733,4.09e-18,12;UBERON:0002028,4.09e-18,12;UBERON:0007277,4.09e-18,12;UBERON:0000025,1.15e-16,192;UBERON:0002680,2.59e-14,9;UBERON:0001895,2.59e-14,9;UBERON:0010092,2.59e-14,9;UBERON:0002298,2.69e-14,6;UBERON:0003076,3.14e-14,15;UBERON:0003057,3.14e-14,15;UBERON:0001871,7.26e-14,6;UBERON:0001872,5.43e-13,5;UBERON:0001870,5.51e-13,3;UBERON:0002021,6.13e-13,5;UBERON:0001894,2.19e-12,7;UBERON:0006222,2.19e-12,7;UBERON:0000349,3.76e-12,5;UBERON:0004111,1.19e-11,240;UBERON:0000988,3.82e-11,3;UBERON:0000483,3.18e-10,306;UBERON:0000119,4.88e-10,309;UBERON:0002702,3.18e-09,2;UBERON:0002771,4.90e-09,2;UBERON:0002784,1.17e-08,4;UBERON:0003296,1.45e-08,4;UBERON:0010133,1.45e-08,4;UBERON:0001876,1.49e-08,2;UBERON:0001905,3.03e-08,2;UBERON:0002757,3.03e-08,2;UBERON:0010134,3.03e-08,2;UBERON:0005408,3.03e-08,2;UBERON:0001899,3.03e-08,2;UBERON:0002148,7.79e-08,2;UBERON:0006331,7.79e-08,2;UBERON:0009662,7.79e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59143007015371,4.18713006194723,5.35233312933019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.651844533267181,0.946895611469467,0,0,0,0,0.270803863765016,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95318118213038,4.50142132513641,0,0,0,0,0.552567831062295,1.51159648712566,0,2.8309505256046,0,0,0,0,0,0,0,6.78532922266653,11.224939877584,3.99227596002388,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0,0.885741385813839,0.964771509003264,9.15490417902499,11.6108222927786,7.97978571174578,14.9182070064701,4.03072315020264,0,0,0,0,0,0.869178975376065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,2.4441205797345,0,0,0,0.606610196826093,0,1.40558667435203,0,0,0,0,0,0.91821828489147,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0,0,0,15.0679694374991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,2.21705459206197,0,0,0,0,0,0,0,0,2.04305109167363,0,0.275078873194468,0,0,0,15.3088882778222,0,0.394028536495991,0.367182116944987,0,2.86859742932552,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,1.42211251997706,1.45455861916959,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,18.6074317793067,23.184990331373,12.6442840013565,0.573409195690071,1.44207766997908,1.24192805882767,0,0,0,0,0,6.08835377548946,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.29550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.247871528518004,0,0,0,3.20228299314188,0,0,7.51481933628576,17.0035891590702,6.70462208040035,13.5376800398898,0.504143392443436,8.78297106295567,9.68853873791107,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0631001081408,10.9350933805939,12.6078945865722,11.541677455291,0,0,0,0,0,4.28561468702629,2.35398605553177,0,1.36597314810779,0,0.230467975111559,0,3.94224451265624,10.9840531849958,0.118193840883968,0,0.078493092850514,0.471346769748006,0,0,0,0,0.214429632529969,0.632054446930906,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0.659643100472575,0,1.54348316215889,0,0,0,0.471353094203252,0.785233868459781,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,12.2384682343646,0,1.0580536810308,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,1.65833887891756,0.310298987585686,0,0,0.387533459016037,1.1794195716213,0,0,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.59143007015371,4.18713006194723,5.35233312933019,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0.651844533267181,0.946895611469467,0,0,0,0,0.270803863765016,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42311289670768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.95318118213038,4.50142132513641,0,0,0,0,0.552567831062295,1.51159648712566,0,2.8309505256046,0,0,0,0,0,0,0,6.78532922266653,11.224939877584,3.99227596002388,0,0,0,0,0,0.236387681767936,0.344743373241465,0,0,0.885741385813839,0.964771509003264,9.15490417902499,11.6108222927786,7.97978571174578,14.9182070064701,4.03072315020264,0,0,0,0,0,0.869178975376065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,2.4441205797345,0,0,0,0.606610196826093,0,1.40558667435203,0,0,0,0,0,0.91821828489147,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0,0,0,0,0,15.0679694374991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,2.21705459206197,0,0,0,0,0,0,0,0,2.04305109167363,0,0.275078873194468,0,0,0,15.3088882778222,0,0.394028536495991,0.367182116944987,0,2.86859742932552,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.146552233678082,0,1.42211251997706,1.45455861916959,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,18.6074317793067,23.184990331373,12.6442840013565,0.573409195690071,1.44207766997908,1.24192805882767,0,0,0,0,0,6.08835377548946,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.29550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425149840203366,0.247871528518004,0,0,0,3.20228299314188,0,0,7.51481933628576,17.0035891590702,6.70462208040035,13.5376800398898,0.504143392443436,8.78297106295567,9.68853873791107,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,10.0631001081408,10.9350933805939,12.6078945865722,11.541677455291,0,0,0,0,0,4.28561468702629,2.35398605553177,0,1.36597314810779,0,0.230467975111559,0,3.94224451265624,10.9840531849958,0.118193840883968,0,0.078493092850514,0.471346769748006,0,0,0,0,0.214429632529969,0.632054446930906,0,0,0,0,0,0,0.860454717640555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0.659643100472575,0,1.54348316215889,0,0,0,0.471353094203252,0.785233868459781,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,12.2384682343646,0,1.0580536810308,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,1.65833887891756,0.310298987585686,0,0,0.387533459016037,1.1794195716213,0,0,0.202117188958219,0,0,0,0.215166616178029,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@CACNB2 | |short_description=p2@CACNB2 | ||
}} | }} |
Latest revision as of 12:09, 17 September 2015
Short description: | p2@CACNB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CACNB2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 69bp_to_NM_201570, uc001iqa.2, uc010qcn.1, uc010qco.1_5end |
EntrezGene: | CACNB2 |
HGNC: | 1402 |
UniProt: | Q08289Q5VVH1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data