FFCP PHASE1:Mm9::chr10:128181296..128181308,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13139 | |EntrezGene=13139 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=O88673 | |UniProt=O88673 | ||
|association_with_transcript=-184bp_to_ENSMUST00000026414,NM_016811,uc007hoc.1_5end | |association_with_transcript=-184bp_to_ENSMUST00000026414,NM_016811,uc007hoc.1_5end | ||
|cluster_id=chr10:128181296..128181308,- | |||
|description=CAGE_peak_3_at_Dgka_5end | |description=CAGE_peak_3_at_Dgka_5end | ||
|id=chr10:128181296..128181308,- | |id=chr10:128181296..128181308,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.40e-14,6;CL:0000677,2.40e-14,6;CL:0000584,2.40e-14,6;CL:0000075,3.44e-12,7;CL:0002563,3.51e-12,9;CL:0002251,3.51e-12,9;CL:0000682,1.96e-08,3;CL:0000066,6.78e-08,25;CL:0002076,6.88e-07,15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!9.28e-12!15;UBERON:0001242!3.97e-10!13;UBERON:0000060!3.97e-10!13;UBERON:0001262!3.97e-10!13;UBERON:0004786!3.97e-10!13;UBERON:0004923!4.74e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,3.01e-25,15;UBERON:0000160,1.10e-24,31;UBERON:0001242,4.33e-21,13;UBERON:0001262,4.33e-21,13;UBERON:0004786,4.33e-21,13;UBERON:0005409,2.82e-18,47;UBERON:0004923,1.23e-14,24;UBERON:0003350,3.51e-12,9;UBERON:0004808,3.51e-12,9;UBERON:0001277,3.51e-12,9;UBERON:0000014,6.58e-11,5;UBERON:0001003,6.58e-11,5;UBERON:0002097,6.58e-11,5;UBERON:0002199,6.58e-11,5;UBERON:0007029,6.58e-11,5;UBERON:0007376,6.58e-11,5;UBERON:0002416,6.58e-11,5;UBERON:0007383,6.58e-11,5;UBERON:0002108,2.73e-10,4;UBERON:0000485,8.97e-10,11;UBERON:0000331,1.86e-08,3;UBERON:0002116,1.86e-08,3;UBERON:0001204,1.86e-08,3;UBERON:0001168,1.86e-08,3;UBERON:0001007,2.28e-07,116;UBERON:0001555,2.28e-07,116;UBERON:0007026,2.28e-07,116;UBERON:0004119,3.78e-07,118;UBERON:0000925,3.78e-07,118;UBERON:0006595,3.78e-07,118 | |||
|phase1_expression=0,28.2670080187882,32.7599452360466,9.37639055051173,13.023288978605,1.17515490338323,1.16806320297763,0.645616617207881,0,0.468129052643987,0.171217968225505,0,0.513602189793617,0.611942816932982,0,0,0,0,0,0,0,0,0,4.63978026100879,4.5881856213434,24.1177424928308,9.04600191934057,8.61884930743556,17.1021077510736,18.6502296022349,6.20845429834853,0,0,0,0,0.664938581433969,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0.131886287730194,0,0,0,0.56276261003168,0,0,0,0,0.227178579999552,0.151143120213571,0,0.860423876981386,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0,1.25602267690966,0.517875767294343,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0.144599356919912,0,0,0,0,3.72783522436244,0.292780797011547,0.209446706813455,14.0501380364725,0,0,0,0.149790639404823,0.915001205637253,0,0,0,0,0.162241263067758,0,0,0.505445516867349,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0.556094498451196,2.43776516565517,1.4404749548556,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0.102904612379284,43.9456981368451,7.40461586657924,0,0,0,0,0,0,8.0669940462567,0,0.251335208800269,0.198956472041151,0,14.3811105384675,7.13255564586491,10.5544874824815,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.42366414172764,0.441056796109924,1.97863503529776,1.13025098687134,1.32688434841943,2.74556391207214,2.62625439592098,1.45740418314925,0.18542530201051,0,0,0,0,0,0.228778173206523,0.169978429993855,0.139951452323658,0,1.90934123603023,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.269728692769641,0.330613822901344,0.523511883968059,2.20345454596048,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0.405450430580328,0,0.129920822977795,0,0,0.120195449519969,0.295379054349154,0,0.228620419965,0.201652370273681,0,0.0962118416403295,0,1.36038230169127,0.221985953374065,2.6017018416748,1.34307693091263,0.19318959403219,0,0,1.2862102744744,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.37456602987953,0.256100609619477,0.229741875822453,0,0.231768651889711,0,0,0.147198920134397,0,0,0.715308569841963,0,0.282328141245992,0,0,0.263069711437843,0,0,0,0.197008964751127,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0,0 | |phase1_expression=0,28.2670080187882,32.7599452360466,9.37639055051173,13.023288978605,1.17515490338323,1.16806320297763,0.645616617207881,0,0.468129052643987,0.171217968225505,0,0.513602189793617,0.611942816932982,0,0,0,0,0,0,0,0,0,4.63978026100879,4.5881856213434,24.1177424928308,9.04600191934057,8.61884930743556,17.1021077510736,18.6502296022349,6.20845429834853,0,0,0,0,0.664938581433969,1.02084678131185,0,0,0,0,0,0,0.125896817975577,0.101376931219515,0,0,0,0,0.194429899074283,0,0,0.167782606057736,0,0.336093799142464,0,0,0,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0,0,0.131886287730194,0,0,0,0.56276261003168,0,0,0,0,0.227178579999552,0.151143120213571,0,0.860423876981386,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0.432982082022428,0.506719730950197,0,1.25602267690966,0.517875767294343,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0.144599356919912,0,0,0,0,3.72783522436244,0.292780797011547,0.209446706813455,14.0501380364725,0,0,0,0.149790639404823,0.915001205637253,0,0,0,0,0.162241263067758,0,0,0.505445516867349,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.0937017245597288,0.517406741478031,0,0,0,0.219195732427575,0.556094498451196,2.43776516565517,1.4404749548556,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.210289948564127,0.102904612379284,43.9456981368451,7.40461586657924,0,0,0,0,0,0,8.0669940462567,0,0.251335208800269,0.198956472041151,0,14.3811105384675,7.13255564586491,10.5544874824815,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0.163863314715738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0.162886959353576,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0.42366414172764,0.441056796109924,1.97863503529776,1.13025098687134,1.32688434841943,2.74556391207214,2.62625439592098,1.45740418314925,0.18542530201051,0,0,0,0,0,0.228778173206523,0.169978429993855,0.139951452323658,0,1.90934123603023,0,0.203319467126849,0.216010681643603,0.209088296014469,0,0.269728692769641,0.330613822901344,0.523511883968059,2.20345454596048,0,0,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0,0,0.104859344425711,0,0,0,0.405450430580328,0,0.129920822977795,0,0,0.120195449519969,0.295379054349154,0,0.228620419965,0.201652370273681,0,0.0962118416403295,0,1.36038230169127,0.221985953374065,2.6017018416748,1.34307693091263,0.19318959403219,0,0,1.2862102744744,1.00314420807073,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0.243106717068294,0.209613162627982,0,0.222246727801615,0,0,0,0,0,0.37456602987953,0.256100609619477,0.229741875822453,0,0.231768651889711,0,0,0.147198920134397,0,0,0.715308569841963,0,0.282328141245992,0,0,0.263069711437843,0,0,0,0.197008964751127,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.429742108096597,0.191288332068843,0,0 | ||
|short_description=p3@Dgka | |short_description=p3@Dgka | ||
}} | }} |
Latest revision as of 19:17, 25 September 2015
Short description: | p3@Dgka |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Dgka_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -184bp_to_ENSMUST00000026414, NM_016811, uc007hoc.1_5end |
EntrezGene: | Dgka |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.40e-14 | 6 |
gut absorptive cell | 2.40e-14 | 6 |
enterocyte | 2.40e-14 | 6 |
columnar/cuboidal epithelial cell | 3.44e-12 | 7 |
intestinal epithelial cell | 3.51e-12 | 9 |
epithelial cell of alimentary canal | 3.51e-12 | 9 |
M cell of gut | 1.96e-08 | 3 |
epithelial cell | 6.78e-08 | 25 |
endo-epithelial cell | 6.88e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
mucosa | 3.01e-25 | 15 |
intestine | 1.10e-24 | 31 |
intestinal mucosa | 4.33e-21 | 13 |
wall of intestine | 4.33e-21 | 13 |
gastrointestinal system mucosa | 4.33e-21 | 13 |
gastrointestinal system | 2.82e-18 | 47 |
organ component layer | 1.23e-14 | 24 |
epithelium of mucosa | 3.51e-12 | 9 |
gastrointestinal system epithelium | 3.51e-12 | 9 |
intestinal epithelium | 3.51e-12 | 9 |
zone of skin | 6.58e-11 | 5 |
skin epidermis | 6.58e-11 | 5 |
skin of body | 6.58e-11 | 5 |
integument | 6.58e-11 | 5 |
surface | 6.58e-11 | 5 |
outer epithelium | 6.58e-11 | 5 |
integumental system | 6.58e-11 | 5 |
enveloping layer of ectoderm | 6.58e-11 | 5 |
small intestine | 2.73e-10 | 4 |
simple columnar epithelium | 8.97e-10 | 11 |
ileal mucosa | 1.86e-08 | 3 |
ileum | 1.86e-08 | 3 |
mucosa of small intestine | 1.86e-08 | 3 |
wall of small intestine | 1.86e-08 | 3 |
digestive system | 2.28e-07 | 116 |
digestive tract | 2.28e-07 | 116 |
primitive gut | 2.28e-07 | 116 |
endoderm-derived structure | 3.78e-07 | 118 |
endoderm | 3.78e-07 | 118 |
presumptive endoderm | 3.78e-07 | 118 |