FFCP PHASE1:Hg19::chr10:105315102..105315121,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9148 | |EntrezGene=9148 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7761 | |HGNC=7761 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_ENST00000369777_5end | |association_with_transcript=-15bp_to_ENST00000369777_5end | ||
|cluster_id=chr10:105315102..105315121,+ | |||
|coexpression_cluster_id=C2975 | |||
|description=CAGE_peak_9_at_NEURL_5end | |description=CAGE_peak_9_at_NEURL_5end | ||
|id=chr10:105315102..105315121,+ | |id=chr10:105315102..105315121,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.71e-16!42;CL:0000860!1.48e-14!45;CL:0002393!2.84e-09!9;CL:0002397!2.84e-09!9;CL:0000766!6.17e-08!76;CL:0002009!9.46e-08!65;CL:0002194!1.28e-07!63;CL:0000576!1.28e-07!63;CL:0000040!1.28e-07!63;CL:0000559!1.28e-07!63;CL:0000557!1.77e-07!71;CL:0000839!4.01e-07!70 | |ontology_enrichment_celltype=CL:0002057!2.71e-16!42;CL:0000860!1.48e-14!45;CL:0002393!2.84e-09!9;CL:0002397!2.84e-09!9;CL:0000766!6.17e-08!76;CL:0002009!9.46e-08!65;CL:0002194!1.28e-07!63;CL:0000576!1.28e-07!63;CL:0000040!1.28e-07!63;CL:0000559!1.28e-07!63;CL:0000557!1.77e-07!71;CL:0000839!4.01e-07!70 | ||
|ontology_enrichment_celltype_v019=CL:0000875;1.26e-10;3!CL:0002396;1.26e-10;3!CL:0002393;2.72e-08;6!CL:0002397;2.72e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.37e-16,9;CL:0002397,2.37e-16,9;CL:0000875,1.27e-10,3;CL:0002396,1.27e-10,3 | |||
|ontology_enrichment_development_v019=UBERON:0006215;3.96e-10;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.20e-38!115;UBERON:0001049!1.36e-21!57;UBERON:0005068!1.36e-21!57;UBERON:0006241!1.36e-21!57;UBERON:0007135!1.36e-21!57;UBERON:0002780!3.57e-19!41;UBERON:0001890!3.57e-19!41;UBERON:0006240!3.57e-19!41;UBERON:0002616!4.17e-19!59;UBERON:0003080!1.78e-18!42;UBERON:0002020!7.25e-16!34;UBERON:0003528!7.25e-16!34;UBERON:0000955!4.55e-15!69;UBERON:0006238!4.55e-15!69;UBERON:0001869!4.89e-15!32;UBERON:0001893!7.50e-15!34;UBERON:0001950!2.02e-14!20;UBERON:0002791!3.91e-14!33;UBERON:0002619!5.65e-14!22;UBERON:0003075!1.98e-12!86;UBERON:0007284!1.98e-12!86;UBERON:0001017!2.26e-12!82;UBERON:0005743!3.41e-12!86;UBERON:0000956!1.18e-11!25;UBERON:0000203!1.18e-11!25;UBERON:0002346!2.53e-11!90;UBERON:0003056!8.65e-11!61;UBERON:0000073!6.62e-10!94;UBERON:0001016!6.62e-10!94;UBERON:0002390!1.02e-09!102;UBERON:0003061!1.02e-09!102;UBERON:0000153!1.95e-09!129;UBERON:0007811!1.95e-09!129;UBERON:0000062!6.07e-09!511;UBERON:0002193!2.58e-08!112;UBERON:0000033!2.61e-08!123;UBERON:0000922!2.68e-08!612;UBERON:0000468!2.64e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.44e-09;17!UBERON:0005409;6.22e-09;22!UBERON:0003296;3.70e-07;4!UBERON:0010133;3.70e-07;4!UBERON:0001905;3.92e-07;2!UBERON:0002757;3.92e-07;2!UBERON:0010134;3.92e-07;2!UBERON:0005408;3.92e-07;2!UBERON:0001899;3.92e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.17e-21,114;UBERON:0000160,1.26e-09,17;UBERON:0000073,4.81e-08,53;UBERON:0002616,4.81e-08,53;UBERON:0005409,9.54e-08,25;UBERON:0001049,1.90e-07,56;UBERON:0005068,1.90e-07,56;UBERON:0006241,1.90e-07,56;UBERON:0007135,1.90e-07,56;UBERON:0003296,2.90e-07,4;UBERON:0010133,2.90e-07,4;UBERON:0001905,4.05e-07,2;UBERON:0002757,4.05e-07,2;UBERON:0010134,4.05e-07,2;UBERON:0005408,4.05e-07,2;UBERON:0001899,4.05e-07,2;UBERON:0000059,9.15e-07,11 | |||
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| ||
|short_description=p9@NEURL | |short_description=p9@NEURL | ||
}} | }} |
Latest revision as of 03:53, 16 September 2015
Short description: | p9@NEURL |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NEURL_5end |
Coexpression cluster: | C2975_CD14CD16_CD14_smallcell_cerebellum_eye_pineal_merkel |
Association with transcript: | -15bp_to_ENST00000369777_5end |
EntrezGene: | NEURL |
HGNC: | 7761 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.37e-16 | 9 |
CD14-positive, CD16-positive monocyte | 2.37e-16 | 9 |
non-classical monocyte | 1.27e-10 | 3 |
CD14-low, CD16-positive monocyte | 1.27e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.17e-21 | 114 |
intestine | 1.26e-09 | 17 |
regional part of nervous system | 4.81e-08 | 53 |
regional part of brain | 4.81e-08 | 53 |
gastrointestinal system | 9.54e-08 | 25 |
neural tube | 1.90e-07 | 56 |
neural rod | 1.90e-07 | 56 |
future spinal cord | 1.90e-07 | 56 |
neural keel | 1.90e-07 | 56 |
gland of diencephalon | 2.90e-07 | 4 |
neuroendocrine gland | 2.90e-07 | 4 |
pineal body | 4.05e-07 | 2 |
regional part of epithalamus | 4.05e-07 | 2 |
secretory circumventricular organ | 4.05e-07 | 2 |
circumventricular organ | 4.05e-07 | 2 |
epithalamus | 4.05e-07 | 2 |
large intestine | 9.15e-07 | 11 |