FFCP PHASE1:Mm9::chr11:60955979..60956009,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57916 | |EntrezGene=57916 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=18 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000130708_5end | |association_with_transcript=0bp_to_ENSMUST00000130708_5end | ||
|cluster_id=chr11:60955979..60956009,+ | |||
|description=CAGE_peak_1_at_Tnfrsf13b_5end | |description=CAGE_peak_1_at_Tnfrsf13b_5end | ||
|id=chr11:60955979..60956009,+ | |id=chr11:60955979..60956009,+ | ||
|ontology_enrichment_celltype=CL:0000988!7.29e-10!32;CL:0002032!7.29e-10!32;CL:0000037!7.29e-10!32;CL:0000566!7.29e-10!32;CL:0000837!7.29e-10!32;CL:0002031!2.66e-07!25;CL:0000738!7.06e-07!17;CL:0002087!7.06e-07!17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.75e-11,32;CL:0002032,3.75e-11,32;CL:0000037,3.75e-11,32;CL:0000837,3.75e-11,32;CL:0002031,1.29e-08,25;CL:0000738,4.56e-07,17;CL:0002087,4.56e-07,17;CL:0000049,6.59e-07,19 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.37e-19!48;UBERON:0002390!1.16e-17!45;UBERON:0003061!1.16e-17!45;UBERON:0002405!9.16e-16!70;UBERON:0003081!2.63e-10!88;UBERON:0004177!7.95e-10!29;UBERON:0001474!6.14e-09!22;UBERON:0004765!6.14e-09!22;UBERON:0001434!6.14e-09!22;UBERON:0002371!7.20e-09!16;UBERON:0000926!1.95e-08!193;UBERON:0004120!1.95e-08!193;UBERON:0006603!1.95e-08!193;UBERON:0001041!2.46e-08!92;UBERON:0000077!1.61e-07!97;UBERON:0005057!2.13e-07!51;UBERON:0003408!3.58e-07!24;UBERON:0001004!4.63e-07!42;UBERON:0002370!7.65e-07!23;UBERON:0000974!7.65e-07!23;UBERON:0004807!7.65e-07!23;UBERON:0005058!7.65e-07!23;UBERON:0003351!7.65e-07!23;UBERON:0009113!7.65e-07!23;UBERON:0003295!7.65e-07!23;UBERON:0009722!7.65e-07!23;UBERON:0005562!7.65e-07!23;UBERON:0007690!7.65e-07!23;UBERON:0000065!9.32e-07!41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,4.95e-22,48;UBERON:0002405,4.95e-22,48;UBERON:0002390,3.71e-20,45;UBERON:0003061,3.71e-20,45;UBERON:0004177,1.85e-11,29;UBERON:0005057,1.85e-11,29;UBERON:0003081,1.98e-10,87;UBERON:0001474,6.06e-10,22;UBERON:0004765,6.06e-10,22;UBERON:0001434,6.06e-10,22;UBERON:0002371,1.43e-09,16;UBERON:0001041,5.87e-09,80;UBERON:0003408,1.77e-08,24;UBERON:0001004,2.82e-08,42;UBERON:0002370,4.10e-08,23;UBERON:0000974,4.10e-08,23;UBERON:0004807,4.10e-08,23;UBERON:0005058,4.10e-08,23;UBERON:0003351,4.10e-08,23;UBERON:0009113,4.10e-08,23;UBERON:0003295,4.10e-08,23;UBERON:0009722,4.10e-08,23;UBERON:0005562,4.10e-08,23;UBERON:0007690,4.10e-08,23;UBERON:0000065,6.22e-08,41;UBERON:0000077,8.87e-08,35;UBERON:0006562,2.23e-07,24;UBERON:0001557,2.23e-07,24;UBERON:0001042,2.23e-07,24;UBERON:0008814,2.23e-07,24;UBERON:0009145,2.23e-07,24;UBERON:0002204,6.80e-07,32 | |||
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| ||
|short_description=p1@Tnfrsf13b | |short_description=p1@Tnfrsf13b | ||
}} | }} |
Latest revision as of 20:21, 1 October 2015
Short description: | p1@Tnfrsf13b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tnfrsf13b_5end |
Coexpression cluster: | MCL_coexpression_mm9:18 |
Association with transcript: | 0bp_to_ENSMUST00000130708_5end |
EntrezGene: | Tnfrsf13b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.75e-11 | 32 |
hematopoietic oligopotent progenitor cell | 3.75e-11 | 32 |
hematopoietic stem cell | 3.75e-11 | 32 |
hematopoietic multipotent progenitor cell | 3.75e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 1.29e-08 | 25 |
leukocyte | 4.56e-07 | 17 |
nongranular leukocyte | 4.56e-07 | 17 |
common myeloid progenitor | 6.59e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 4.95e-22 | 48 |
immune system | 4.95e-22 | 48 |
hematopoietic system | 3.71e-20 | 45 |
blood island | 3.71e-20 | 45 |
hemopoietic organ | 1.85e-11 | 29 |
immune organ | 1.85e-11 | 29 |
lateral plate mesoderm | 1.98e-10 | 87 |
bone element | 6.06e-10 | 22 |
skeletal element | 6.06e-10 | 22 |
skeletal system | 6.06e-10 | 22 |
bone marrow | 1.43e-09 | 16 |
foregut | 5.87e-09 | 80 |
gland of gut | 1.77e-08 | 24 |
respiratory system | 2.82e-08 | 42 |
thymus | 4.10e-08 | 23 |
neck | 4.10e-08 | 23 |
respiratory system epithelium | 4.10e-08 | 23 |
hemolymphoid system gland | 4.10e-08 | 23 |
pharyngeal epithelium | 4.10e-08 | 23 |
thymic region | 4.10e-08 | 23 |
pharyngeal gland | 4.10e-08 | 23 |
entire pharyngeal arch endoderm | 4.10e-08 | 23 |
thymus primordium | 4.10e-08 | 23 |
early pharyngeal endoderm | 4.10e-08 | 23 |
respiratory tract | 6.22e-08 | 41 |
mixed endoderm/mesoderm-derived structure | 8.87e-08 | 35 |
pharynx | 2.23e-07 | 24 |
upper respiratory tract | 2.23e-07 | 24 |
chordate pharynx | 2.23e-07 | 24 |
pharyngeal arch system | 2.23e-07 | 24 |
pharyngeal region of foregut | 2.23e-07 | 24 |
musculoskeletal system | 6.80e-07 | 32 |