FFCP PHASE1:Mm9::chr11:120924840..120924845,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=58210 | |EntrezGene=58210 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D966 | |UniProt=Q9D966 | ||
|association_with_transcript=6bp_to_ENSMUST00000168459_5end | |association_with_transcript=6bp_to_ENSMUST00000168459_5end | ||
|cluster_id=chr11:120924840..120924845,- | |||
|description=CAGE_peak_2_at_Sectm1b_5end | |description=CAGE_peak_2_at_Sectm1b_5end | ||
|id=chr11:120924840..120924845,- | |id=chr11:120924840..120924845,- | ||
|ontology_enrichment_celltype=CL:0002563!9.57e-14!9;CL:0002251!9.57e-14!9;CL:0000239!6.50e-13!6;CL:0000677!6.50e-13!6;CL:0000212!6.50e-13!6;CL:0000584!6.50e-13!6;CL:0000075!6.14e-11!7;CL:0000066!5.50e-08!25;CL:0002076!1.24e-07!15;CL:0000473!2.56e-07!3;CL:0000627!2.56e-07!3;CL:0000682!2.56e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,3.17e-14,6;CL:0000677,3.17e-14,6;CL:0000584,3.17e-14,6;CL:0000075,3.76e-12,7;CL:0000682,1.12e-10,3;CL:0002563,2.21e-09,9;CL:0002251,2.21e-09,9;CL:0000066,1.57e-07,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.60e-29!43;UBERON:0005409!1.59e-26!59;UBERON:0000344!4.12e-25!15;UBERON:0001242!1.27e-21!13;UBERON:0000060!1.27e-21!13;UBERON:0001262!1.27e-21!13;UBERON:0004786!1.27e-21!13;UBERON:0004923!2.18e-16!24;UBERON:0003350!9.57e-14!9;UBERON:0004808!9.57e-14!9;UBERON:0001277!9.57e-14!9;UBERON:0000485!5.81e-11!11;UBERON:0001007!1.40e-10!128;UBERON:0001555!1.40e-10!128;UBERON:0007026!1.40e-10!128;UBERON:0004119!2.73e-10!130;UBERON:0000925!2.73e-10!130;UBERON:0006595!2.73e-10!130;UBERON:0004921!4.62e-09!126;UBERON:0004185!4.62e-09!126;UBERON:0000331!2.02e-07!3;UBERON:0002116!2.02e-07!3;UBERON:0001204!2.02e-07!3;UBERON:0001168!2.02e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.39e-35,31;UBERON:0005409,1.53e-29,47;UBERON:0000344,2.86e-25,15;UBERON:0001242,4.00e-20,13;UBERON:0001262,4.00e-20,13;UBERON:0004786,4.00e-20,13;UBERON:0004923,5.30e-15,24;UBERON:0002108,1.97e-13,4;UBERON:0001007,1.06e-11,116;UBERON:0001555,1.06e-11,116;UBERON:0007026,1.06e-11,116;UBERON:0004119,2.01e-11,118;UBERON:0000925,2.01e-11,118;UBERON:0006595,2.01e-11,118;UBERON:0000331,7.66e-11,3;UBERON:0002116,7.66e-11,3;UBERON:0001204,7.66e-11,3;UBERON:0001168,7.66e-11,3;UBERON:0004921,1.23e-09,114;UBERON:0003350,2.21e-09,9;UBERON:0004808,2.21e-09,9;UBERON:0001277,2.21e-09,9;UBERON:0000485,1.29e-07,11;UBERON:0001155,1.46e-07,2;UBERON:0000059,1.46e-07,2;UBERON:0001962,5.42e-07,2;UBERON:0001961,5.42e-07,2;UBERON:0001744,5.42e-07,2 | |||
|phase1_expression=0,15.0059425284925,12.2849794635175,10.5862473957391,10.0179145989269,1.51091344720701,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.07990149631429,1.83527424853736,9.18771142584032,5.59990595006797,4.09395342103189,10.2612646506442,11.3413558391969,3.32595765982957,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,7.40825460104915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5034518470927,3.43785736662608,0,0,0.128867461322093,0,0,0.570676878337677,2.37264530772256,0.494096864172033,2.01068167040216,1.98956472041151,0.974820435595601,3.59527763461689,5.83572734661674,3.98282546508734,0,0,0,0,0,0,0,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809186078308924,1.23980183588004,1.04702376793612,8.16574331738295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | |phase1_expression=0,15.0059425284925,12.2849794635175,10.5862473957391,10.0179145989269,1.51091344720701,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,2.07990149631429,1.83527424853736,9.18771142584032,5.59990595006797,4.09395342103189,10.2612646506442,11.3413558391969,3.32595765982957,0,0,0,0,0.332469290716985,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.25602267690966,0,0,0,0,0,0,0,0.125666591329675,0.247194967734374,0,0,0,0,0,3.72783522436244,0,0,7.40825460104915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.5034518470927,3.43785736662608,0,0,0.128867461322093,0,0,0.570676878337677,2.37264530772256,0.494096864172033,2.01068167040216,1.98956472041151,0.974820435595601,3.59527763461689,5.83572734661674,3.98282546508734,0,0,0,0,0,0,0,0,0.31399745568275,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809186078308924,1.23980183588004,1.04702376793612,8.16574331738295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0,0 | ||
|short_description=p2@Sectm1b | |short_description=p2@Sectm1b | ||
}} | }} |
Latest revision as of 03:42, 27 September 2015
Short description: | p2@Sectm1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sectm1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 6bp_to_ENSMUST00000168459_5end |
EntrezGene: | Sectm1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 3.17e-14 | 6 |
gut absorptive cell | 3.17e-14 | 6 |
enterocyte | 3.17e-14 | 6 |
columnar/cuboidal epithelial cell | 3.76e-12 | 7 |
M cell of gut | 1.12e-10 | 3 |
intestinal epithelial cell | 2.21e-09 | 9 |
epithelial cell of alimentary canal | 2.21e-09 | 9 |
epithelial cell | 1.57e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.39e-35 | 31 |
gastrointestinal system | 1.53e-29 | 47 |
mucosa | 2.86e-25 | 15 |
intestinal mucosa | 4.00e-20 | 13 |
wall of intestine | 4.00e-20 | 13 |
gastrointestinal system mucosa | 4.00e-20 | 13 |
organ component layer | 5.30e-15 | 24 |
small intestine | 1.97e-13 | 4 |
digestive system | 1.06e-11 | 116 |
digestive tract | 1.06e-11 | 116 |
primitive gut | 1.06e-11 | 116 |
endoderm-derived structure | 2.01e-11 | 118 |
endoderm | 2.01e-11 | 118 |
presumptive endoderm | 2.01e-11 | 118 |
ileal mucosa | 7.66e-11 | 3 |
ileum | 7.66e-11 | 3 |
mucosa of small intestine | 7.66e-11 | 3 |
wall of small intestine | 7.66e-11 | 3 |
subdivision of digestive tract | 1.23e-09 | 114 |
epithelium of mucosa | 2.21e-09 | 9 |
gastrointestinal system epithelium | 2.21e-09 | 9 |
intestinal epithelium | 2.21e-09 | 9 |
simple columnar epithelium | 1.29e-07 | 11 |
colon | 1.46e-07 | 2 |
large intestine | 1.46e-07 | 2 |
gut-associated lymphoid tissue | 5.42e-07 | 2 |
mucosa-associated lymphoid tissue | 5.42e-07 | 2 |
lymphoid tissue | 5.42e-07 | 2 |