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FFCP PHASE1:Mm9::chr9:56996186..56996212,-: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:56996186..56996212,-
|DHSsupport=NA
|short_description=p4@Neil1
|DPIdataset=NA
|description=CAGE_peak_4_at_Neil1_5end
|association_with_transcript=-167bp_to_uc009pui.1,uc009puj.1_5end
|EntrezGene=72774
|EntrezGene=72774
|HGNC=
|HGNC=
|MCL_coexpression_id=4
|TSSclassifier=NA
|UniProt=Q3U296
|UniProt=Q3U296
|association_with_transcript=-167bp_to_uc009pui.1,uc009puj.1_5end
|cluster_id=chr9:56996186..56996212,-
|description=CAGE_peak_4_at_Neil1_5end
|id=chr9:56996186..56996212,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,1.13e-08,9;CL:0000789,1.13e-08,9;CL:0002420,1.13e-08,9;CL:0002419,1.13e-08,9;CL:0000790,1.13e-08,9;CL:0000838,1.32e-08,12;CL:0000542,7.31e-08,13;CL:0000051,7.31e-08,13;CL:0002031,1.32e-07,25;CL:0000084,5.75e-07,11;CL:0000827,5.75e-07,11;CL:0000624,6.59e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!3.42e-11!130;UBERON:0000925!3.42e-11!130;UBERON:0006595!3.42e-11!130;UBERON:0001007!3.46e-11!128;UBERON:0001555!3.46e-11!128;UBERON:0007026!3.46e-11!128;UBERON:0004921!1.24e-10!126;UBERON:0004185!1.24e-10!126;UBERON:0001041!2.28e-09!92;UBERON:0000077!2.45e-09!97;UBERON:0004177!5.94e-08!29;UBERON:0001004!6.54e-08!42;UBERON:0000065!1.23e-07!41;UBERON:0003104!2.62e-07!131;UBERON:0009142!2.62e-07!131;UBERON:0000926!5.54e-07!193;UBERON:0004120!5.54e-07!193;UBERON:0006603!5.54e-07!193;UBERON:0003408!6.78e-07!24
|ontology_enrichment_uberon_v019_2=UBERON:0004177,5.03e-23,29;UBERON:0005057,5.03e-23,29;UBERON:0002193,2.20e-21,48;UBERON:0002405,2.20e-21,48;UBERON:0002370,9.41e-21,23;UBERON:0000974,9.41e-21,23;UBERON:0004807,9.41e-21,23;UBERON:0005058,9.41e-21,23;UBERON:0003351,9.41e-21,23;UBERON:0009113,9.41e-21,23;UBERON:0003295,9.41e-21,23;UBERON:0009722,9.41e-21,23;UBERON:0005562,9.41e-21,23;UBERON:0007690,9.41e-21,23;UBERON:0006562,9.85e-20,24;UBERON:0003408,9.85e-20,24;UBERON:0001557,9.85e-20,24;UBERON:0001042,9.85e-20,24;UBERON:0008814,9.85e-20,24;UBERON:0009145,9.85e-20,24;UBERON:0002390,4.97e-19,45;UBERON:0003061,4.97e-19,45;UBERON:0000077,2.63e-18,35;UBERON:0000072,3.96e-17,27;UBERON:0007811,6.17e-12,36;UBERON:0000065,1.82e-11,41;UBERON:0001004,4.21e-11,42;UBERON:0003081,3.73e-10,87;UBERON:0000153,2.04e-09,43;UBERON:0000949,1.50e-08,72;UBERON:0001041,3.92e-08,80;UBERON:0003929,1.29e-07,55
|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0,0,0.33575854382378,0.700837921786577,2.45334314538995,0.422366166455,1.17032263160997,0,0.159544317990673,2.05440875917447,1.66098764596095,0.333109761815663,0.202475267389826,0,3.94327706697797,4.79900517620086,3.81950686618227,0.17008658030214,0.496454756004426,0.261199789138935,1.43993180514066,0.45881856213434,0,0.430761996159075,0.215471232685889,0,0.504060259519861,0.886922042621219,0.635030673459631,0.61506478758457,0,0.866554859253824,0.166234645358492,1.42918549383658,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0.436050312760893,0.219686182734472,0,0.279972843250725,0,3.85899993932794,5.07753499407941,3.6970317905671,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.441737081903227,0,0.191690942036473,0,0,0.127687338085188,0,0,0.182975287204819,0,0.558365998002762,0,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0.649776417447669,0,0.561777680527007,0.340860645156116,0,0,0.422530259330042,0,0,0,0.432982082022428,0.506719730950197,0,0.5709193985953,2.33044095282455,0.148442139064825,0.173485326766136,0.913396434936424,0.230615497256059,0.753613202763113,0.470354828542819,0.376999773989026,0.741584903203122,0.144599356919912,0,0,1.32504911076236,0,0,0.878342391034642,0,0.510914110417183,0,0,0.127070227073065,0.599162557619291,0,0,0,0,0.62336413367868,0.324482526135515,0.305518091550949,1.11966273549084,0.505445516867349,0.210441855886474,0.130120442962704,0.229902104433473,0,0.30140963567143,0.272145996605311,0.512454881139399,0.0937017245597288,0.258703370739016,0.646703978798527,0,0.175951124163949,0.43839146485515,0,0,0.411564272815887,0.59710280045548,0,0,0,0.414251545071004,1.17263029990548,0,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0.656669856316381,0.162137619091711,0.584799949701329,0,0.134206418760372,0,0.308713837137853,1.65209391491899,0,0.213288250535234,0,0.38660238396628,0.605050573870028,0.444756087689741,0.190225626112559,0.474529061544512,0.494096864172033,0.502670417600539,0.795825888164603,0.779856348476481,0,0.648414149624083,0.597423819763102,0.379335801906163,0.114248512609729,0,0.814605311381257,0.193952487167626,0.561086559122548,0.69560190836683,0.590440591918409,0.31399745568275,0.493588655687202,0,0.333690211432188,0.589676985339609,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.486405680325106,0.549122826376163,0,0.744281895337007,0,0.505157755894224,0.538192240565737,0.482443521363367,1.29327233116623,0.189491411770485,0.162964976442026,0.848725428875941,0.234690248288502,0.670025029767263,0.476087281772027,0.390267295715598,0.315270288212382,0.664394068946325,0.956728611944923,0.491589944147214,0.863424909329478,0.867894351489069,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0,0,0.252470927204373,0,0,0.430846795465598,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.851640511249612,0.534196811001766,0.488660878060728,0.329940245945071,0,1.94224508923985,0.302323556964751,0.943025398779491,0.590603785761546,0.307435147943927,1.55056975900933,1.45413491791002,0.356497378384721,1.26414703174326,3.16255825724996,0,0.680879211507576,0.540183282093931,0.388076051348264,0.214337035031592,0.532020700926821,0.356737635204141,0.493647061806363,0,0.23467170806371,0.42366414172764,0.220528398054962,0.16488625294148,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,2.9048049735635,0.619160603889667,0.370389054739423,0.188368457004691,1.91371918809435,1.83022538565218,0,0.559805809294632,0.276399947608848,1.90934123603023,1.10717597753397,0.609958401380546,0.324016022465404,0.836353184057875,0.436725127492355,0.269728692769641,0,0.785267825952089,0.259229946583586,0.621339313086926,0,0.448549638131936,0.496375471371293,0.388902376688095,0.129159823477731,0.168956125490778,0.58678619322877,0.39061315453185,0.209718688851422,0,0.288030006257865,7.58426689507628,0.810900861160657,0.924398614483445,1.42912905275575,2.14832034800978,3.17890167650024,5.64918612743854,4.87375439676105,4.74542314756294,9.14481679859998,6.85618058930516,4.77543615624787,3.94468550725351,11.3370595116122,0.226730383615211,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.187682475451182,0.549454872801795,0.428736758158132,0.501572104035363,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.256100609619477,0.34461281373368,0.476293691283074,0.347652977834566,0,0,0.147198920134397,0,0.354951612318675,0,0,0,0.338458431566706,0.365855945745545,0.263069711437843,0.407412341537585,0.561142271657738,0.711810108745045,0,0,0.154936841185966,0.385813221962283,0.249810577937946,0,0.214871054048298,0.57386499620653,0.661774257358546,0
|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0,0,0.33575854382378,0.700837921786577,2.45334314538995,0.422366166455,1.17032263160997,0,0.159544317990673,2.05440875917447,1.66098764596095,0.333109761815663,0.202475267389826,0,3.94327706697797,4.79900517620086,3.81950686618227,0.17008658030214,0.496454756004426,0.261199789138935,1.43993180514066,0.45881856213434,0,0.430761996159075,0.215471232685889,0,0.504060259519861,0.886922042621219,0.635030673459631,0.61506478758457,0,0.866554859253824,0.166234645358492,1.42918549383658,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0.436050312760893,0.219686182734472,0,0.279972843250725,0,3.85899993932794,5.07753499407941,3.6970317905671,0,0.286533439938757,0,0.202316460859598,0,0,0,0,0.449949858640699,0.988866362566974,0,0,0.384218305321555,0.207379224616955,0.135005938331691,0,0,0.441737081903227,0,0.191690942036473,0,0,0.127687338085188,0,0,0.182975287204819,0,0.558365998002762,0,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.0755715601067855,0.289864488701678,0.860423876981386,0,0,0.649776417447669,0,0.561777680527007,0.340860645156116,0,0,0.422530259330042,0,0,0,0.432982082022428,0.506719730950197,0,0.5709193985953,2.33044095282455,0.148442139064825,0.173485326766136,0.913396434936424,0.230615497256059,0.753613202763113,0.470354828542819,0.376999773989026,0.741584903203122,0.144599356919912,0,0,1.32504911076236,0,0,0.878342391034642,0,0.510914110417183,0,0,0.127070227073065,0.599162557619291,0,0,0,0,0.62336413367868,0.324482526135515,0.305518091550949,1.11966273549084,0.505445516867349,0.210441855886474,0.130120442962704,0.229902104433473,0,0.30140963567143,0.272145996605311,0.512454881139399,0.0937017245597288,0.258703370739016,0.646703978798527,0,0.175951124163949,0.43839146485515,0,0,0.411564272815887,0.59710280045548,0,0,0,0.414251545071004,1.17263029990548,0,0.23674473558521,0.590292695242212,0.462801338662135,0.232533944750408,0.268273401399619,0.350296027101508,0.16455984991348,0.656669856316381,0.162137619091711,0.584799949701329,0,0.134206418760372,0,0.308713837137853,1.65209391491899,0,0.213288250535234,0,0.38660238396628,0.605050573870028,0.444756087689741,0.190225626112559,0.474529061544512,0.494096864172033,0.502670417600539,0.795825888164603,0.779856348476481,0,0.648414149624083,0.597423819763102,0.379335801906163,0.114248512609729,0,0.814605311381257,0.193952487167626,0.561086559122548,0.69560190836683,0.590440591918409,0.31399745568275,0.493588655687202,0,0.333690211432188,0.589676985339609,0,0.202860121388503,0.241177159752417,0.25462585178142,0,0.486405680325106,0.549122826376163,0,0.744281895337007,0,0.505157755894224,0.538192240565737,0.482443521363367,1.29327233116623,0.189491411770485,0.162964976442026,0.848725428875941,0.234690248288502,0.670025029767263,0.476087281772027,0.390267295715598,0.315270288212382,0.664394068946325,0.956728611944923,0.491589944147214,0.863424909329478,0.867894351489069,0,0,0.491764273019036,0.275936746304732,0.481651769963376,0,0,0.252470927204373,0,0,0.430846795465598,0,0.445597348164788,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0.851640511249612,0.534196811001766,0.488660878060728,0.329940245945071,0,1.94224508923985,0.302323556964751,0.943025398779491,0.590603785761546,0.307435147943927,1.55056975900933,1.45413491791002,0.356497378384721,1.26414703174326,3.16255825724996,0,0.680879211507576,0.540183282093931,0.388076051348264,0.214337035031592,0.532020700926821,0.356737635204141,0.493647061806363,0,0.23467170806371,0.42366414172764,0.220528398054962,0.16488625294148,0.322928853391811,0.120625849856312,0.119372344003136,0.164140899745061,0.291480836629851,0.18542530201051,2.9048049735635,0.619160603889667,0.370389054739423,0.188368457004691,1.91371918809435,1.83022538565218,0,0.559805809294632,0.276399947608848,1.90934123603023,1.10717597753397,0.609958401380546,0.324016022465404,0.836353184057875,0.436725127492355,0.269728692769641,0,0.785267825952089,0.259229946583586,0.621339313086926,0,0.448549638131936,0.496375471371293,0.388902376688095,0.129159823477731,0.168956125490778,0.58678619322877,0.39061315453185,0.209718688851422,0,0.288030006257865,7.58426689507628,0.810900861160657,0.924398614483445,1.42912905275575,2.14832034800978,3.17890167650024,5.64918612743854,4.87375439676105,4.74542314756294,9.14481679859998,6.85618058930516,4.77543615624787,3.94468550725351,11.3370595116122,0.226730383615211,0.221985953374065,0.0897138566094757,0,0.386379188064381,0.187682475451182,0.549454872801795,0.428736758158132,0.501572104035363,0,0.460325236507177,0.572895513439397,0,0,0,0,0,0,0,0.207574695168353,0,0.341467211508268,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0.618105171716683,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.256100609619477,0.34461281373368,0.476293691283074,0.347652977834566,0,0,0.147198920134397,0,0.354951612318675,0,0,0,0.338458431566706,0.365855945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|short_description=p4@Neil1
}}
}}

Latest revision as of 21:24, 26 September 2015

Short description:p4@Neil1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Neil1_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: -167bp_to_uc009pui.1, uc009puj.1_5end
EntrezGene:Neil1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Neil1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.70
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.45
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F21.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.16
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E42.05
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E81.66
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.94
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A44.80
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.44
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.46
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.87
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.43
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A23.86
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I95.08
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A13.70
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.13
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.56
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.51
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.57
accessory axillary lymph node, adult.CNhs10475.1063-29H92.33
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.74
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A61.33
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.62
diencephalon, neonate N30.CNhs11201.1388-42B20.32
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.51
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.44
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.46
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.35
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.66
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I31.65
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.78
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.59
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.49
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.59
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.49
liver, neonate N03.CNhs11123.1345-25G20.55
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.54
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.85
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.49
lung, neonate N25.CNhs11119.1359-25C70.86
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F41.94
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E23.16
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.68
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G22.90
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H11.91
spleen, neonate N25.CNhs11099.1354-25G31.83
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.56
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E31.11
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.84
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.45
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.59
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B57.58
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.92
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C12.15
thymus, embryo E18.CNhs10595.1273-19G43.18
thymus, neonate N02.CNhs11181.1541-43F85.65
thymus, neonate N03.CNhs11137.2104-43C74.87
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D39.14
thymus, neonate N10.CNhs11194.748-24E46.86
thymus, neonate N20.CNhs11186.820-7A24.78
thymus, neonate N25.CNhs11125.1362-25G73.94
thymus, neonate N30.CNhs11132.1393-42G211.34
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
hemopoietic organ5.03e-2329
immune organ5.03e-2329
hemolymphoid system2.20e-2148
immune system2.20e-2148
thymus9.41e-2123
neck9.41e-2123
respiratory system epithelium9.41e-2123
hemolymphoid system gland9.41e-2123
pharyngeal epithelium9.41e-2123
thymic region9.41e-2123
pharyngeal gland9.41e-2123
entire pharyngeal arch endoderm9.41e-2123
thymus primordium9.41e-2123
early pharyngeal endoderm9.41e-2123
pharynx9.85e-2024
gland of gut9.85e-2024
upper respiratory tract9.85e-2024
chordate pharynx9.85e-2024
pharyngeal arch system9.85e-2024
pharyngeal region of foregut9.85e-2024
hematopoietic system4.97e-1945
blood island4.97e-1945
mixed endoderm/mesoderm-derived structure2.63e-1835
segment of respiratory tract3.96e-1727
craniocervical region6.17e-1236
respiratory tract1.82e-1141
respiratory system4.21e-1142
lateral plate mesoderm3.73e-1087
anterior region of body2.04e-0943
endocrine system1.50e-0872
foregut3.92e-0880
gut epithelium1.29e-0755
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