FFCP PHASE1:Mm9::chr9:44059548..44059574,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr9:44059548..44059574,- to FFCP PHASE1:Mm9::chr9:44059548..44059574,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=170761 | |EntrezGene=170761 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q99MJ6 | |UniProt=Q99MJ6 | ||
|association_with_transcript=-1bp_to_ENSMUST00000034618,NM_133226,uc009pch.1_5end | |||
|cluster_id=chr9:44059548..44059574,- | |||
|description=CAGE_peak_1_at_Pdzd3_5end | |||
|id=chr9:44059548..44059574,- | |||
|ontology_enrichment_celltype=CL:0002563!1.11e-09!9;CL:0002251!1.11e-09!9;CL:0000239!1.32e-07!6;CL:0000677!1.32e-07!6;CL:0000212!1.32e-07!6;CL:0000584!1.32e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.68e-13,9;CL:0002251,1.68e-13,9;CL:0000239,1.87e-10,6;CL:0000677,1.87e-10,6;CL:0000584,1.87e-10,6;CL:0000075,8.15e-09,7;CL:0002076,2.60e-07,15;CL:0000066,6.56e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.55e-19!43;UBERON:0000344!5.14e-16!15;UBERON:0005409!1.18e-15!59;UBERON:0001242!5.86e-14!13;UBERON:0000060!5.86e-14!13;UBERON:0001262!5.86e-14!13;UBERON:0004786!5.86e-14!13;UBERON:0004923!4.04e-13!24;UBERON:0003350!1.11e-09!9;UBERON:0004808!1.11e-09!9;UBERON:0001277!1.11e-09!9;UBERON:0002113!1.38e-08!14;UBERON:0003918!1.38e-08!14;UBERON:0005095!1.38e-08!14;UBERON:0007687!1.38e-08!14;UBERON:0000485!1.93e-07!11;UBERON:0006554!4.29e-07!16 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.01e-40,31;UBERON:0005409,1.19e-25,47;UBERON:0000344,7.87e-23,15;UBERON:0001242,8.48e-20,13;UBERON:0001262,8.48e-20,13;UBERON:0004786,8.48e-20,13;UBERON:0004923,3.71e-18,24;UBERON:0003350,1.68e-13,9;UBERON:0004808,1.68e-13,9;UBERON:0001277,1.68e-13,9;UBERON:0000485,1.12e-10,11;UBERON:0006554,4.36e-08,18;UBERON:0004119,6.45e-08,118;UBERON:0000925,6.45e-08,118;UBERON:0006595,6.45e-08,118;UBERON:0002113,1.29e-07,14;UBERON:0003918,1.29e-07,14;UBERON:0011143,1.29e-07,14;UBERON:0005095,1.29e-07,14;UBERON:0007687,1.29e-07,14;UBERON:0001008,1.55e-07,19;UBERON:0002108,1.87e-07,4;UBERON:0001007,6.09e-07,116;UBERON:0001555,6.09e-07,116;UBERON:0007026,6.09e-07,116 | |||
|phase1_expression=0,22.6834014965585,16.8349718574128,38.7154190472742,40.5725541256541,4.70061961353291,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,13.5993559374396,19.9586074528438,14.3557991028755,11.630573896295,14.0056301245828,39.9049180858385,17.6421090831952,12.4169085966971,0,0,0,2.3108129580102,2.82598897109437,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,6.50848114398642,0,0,0,0,0,0,0,0,2.96633961281249,0,0,0,0,0,7.45567044872489,0,0,20.1811073614787,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,1.0108910337347,0,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.015647345234,24.3294521330461,0,0,1.9330119198314,5.64713868945359,12.2307924114679,13.6962450801043,19.455691523325,17.9521860649172,17.3421294072186,17.5081695396213,14.0374142725766,17.9763881730844,15.561939590978,16.3295844068581,0.569003702859245,0.913988100877831,4.50830942692322,2.03651327845314,6.0125271021964,5.11991485199326,10.9399209224965,18.1560482014911,18.6828486131236,20.8541207027843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,2.84271122485043,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,1.27099242518292,0,0,0,0,0,0,12.8251568117134,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0,0.87345025498471,0,0,0,12.1838074894285,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.888986911206461,0.618105171716683,1.60459604795908,0.758091635291392,0.50695859978048,0.377252682772152,0.936415074698824,0.576226371643824,0.574354689556133,0.476293691283074,1.27472758539341,0.38581844092741,1.23625770240992,1.03039244094078,1.02860775715625,0.354951612318675,0.953744759789284,0.726732083161643,0.941093804153306,0.676916863133412,0.548783918618318,0.526139422875686,0.814824683075171,1.12228454331548,0.949080144993393,0.394017929502254,1.63692417267876,0.619747364743864,0,0,2.10538447600868,0.859484216193193,0,0,0.231867835620421 | |phase1_expression=0,22.6834014965585,16.8349718574128,38.7154190472742,40.5725541256541,4.70061961353291,6.07392865548367,0,0,0,0,0,0,0,0,0,0,0,0,0,4.76242424845991,0,0,13.5993559374396,19.9586074528438,14.3557991028755,11.630573896295,14.0056301245828,39.9049180858385,17.6421090831952,12.4169085966971,0,0,0,2.3108129580102,2.82598897109437,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24711072210803,0,0,0,0,0,0,0,0,0,0,6.50848114398642,0,0,0,0,0,0,0,0,2.96633961281249,0,0,0,0,0,7.45567044872489,0,0,20.1811073614787,0,0,0,0,0,0,0,0,0,0,0,0.497627882440372,1.0108910337347,0,0,0,0,0,0,0,0.0937017245597288,0,0,0.189106080167819,0,0,0,0,0,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.015647345234,24.3294521330461,0,0,1.9330119198314,5.64713868945359,12.2307924114679,13.6962450801043,19.455691523325,17.9521860649172,17.3421294072186,17.5081695396213,14.0374142725766,17.9763881730844,15.561939590978,16.3295844068581,0.569003702859245,0.913988100877831,4.50830942692322,2.03651327845314,6.0125271021964,5.11991485199326,10.9399209224965,18.1560482014911,18.6828486131236,20.8541207027843,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0,0,0,0.302323556964751,0,0,0,2.84271122485043,0,0,0,0,0,0,0,0,0,0,0,0,0,1.64270195644597,1.27099242518292,0,0,0,0,0,0,12.8251568117134,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0.203319467126849,0.432021363287205,0,0.87345025498471,0,0,0,12.1838074894285,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.888986911206461,0.618105171716683,1.60459604795908,0.758091635291392,0.50695859978048,0.377252682772152,0.936415074698824,0.576226371643824,0.574354689556133,0.476293691283074,1.27472758539341,0.38581844092741,1.23625770240992,1.03039244094078,1.02860775715625,0.354951612318675,0.953744759789284,0.726732083161643,0.941093804153306,0.676916863133412,0.548783918618318,0.526139422875686,0.814824683075171,1.12228454331548,0.949080144993393,0.394017929502254,1.63692417267876,0.619747364743864,0,0,2.10538447600868,0.859484216193193,0,0,0.231867835620421 | ||
|short_description=p1@Pdzd3 | |||
}} | }} |
Latest revision as of 16:42, 26 September 2015
Short description: | p1@Pdzd3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pdzd3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -1bp_to_ENSMUST00000034618, NM_133226, uc009pch.1_5end |
EntrezGene: | Pdzd3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.68e-13 | 9 |
epithelial cell of alimentary canal | 1.68e-13 | 9 |
brush border epithelial cell | 1.87e-10 | 6 |
gut absorptive cell | 1.87e-10 | 6 |
enterocyte | 1.87e-10 | 6 |
columnar/cuboidal epithelial cell | 8.15e-09 | 7 |
endo-epithelial cell | 2.60e-07 | 15 |
epithelial cell | 6.56e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.01e-40 | 31 |
gastrointestinal system | 1.19e-25 | 47 |
mucosa | 7.87e-23 | 15 |
intestinal mucosa | 8.48e-20 | 13 |
wall of intestine | 8.48e-20 | 13 |
gastrointestinal system mucosa | 8.48e-20 | 13 |
organ component layer | 3.71e-18 | 24 |
epithelium of mucosa | 1.68e-13 | 9 |
gastrointestinal system epithelium | 1.68e-13 | 9 |
intestinal epithelium | 1.68e-13 | 9 |
simple columnar epithelium | 1.12e-10 | 11 |
urinary system structure | 4.36e-08 | 18 |
endoderm-derived structure | 6.45e-08 | 118 |
endoderm | 6.45e-08 | 118 |
presumptive endoderm | 6.45e-08 | 118 |
kidney | 1.29e-07 | 14 |
kidney mesenchyme | 1.29e-07 | 14 |
upper urinary tract | 1.29e-07 | 14 |
kidney rudiment | 1.29e-07 | 14 |
kidney field | 1.29e-07 | 14 |
renal system | 1.55e-07 | 19 |
small intestine | 1.87e-07 | 4 |
digestive system | 6.09e-07 | 116 |
digestive tract | 6.09e-07 | 116 |
primitive gut | 6.09e-07 | 116 |