FFCP PHASE1:Mm9::chr7:52976606..52976614,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr7:52976606..52976614,+ to FFCP PHASE1:Mm9::chr7:52976606..52976614,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=73813 | |EntrezGene=73813 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=314 | |||
|TSSclassifier=NA | |||
|UniProt=Q80XS7 | |UniProt=Q80XS7 | ||
|association_with_transcript=16bp_to_ENSMUST00000156689,NM_001033170,uc009gwx.1,uc009gwy.1_5end | |||
|cluster_id=chr7:52976606..52976614,+ | |||
|description=CAGE_peak_2_at_Fam83e_5end | |||
|id=chr7:52976606..52976614,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.01e-09!9;CL:0002251!1.01e-09!9;CL:0002076!2.14e-08!15;CL:0000239!5.79e-07!6;CL:0000677!5.79e-07!6;CL:0000212!5.79e-07!6;CL:0000584!5.79e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.52e-14,9;CL:0002251,5.52e-14,9;CL:0000239,8.51e-09,6;CL:0000677,8.51e-09,6;CL:0000584,8.51e-09,6;CL:0000066,3.73e-08,25;CL:0002076,7.84e-08,15;CL:0000075,1.75e-07,7;CL:0000682,3.57e-07,3;CL:0002250,7.35e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.29e-24!59;UBERON:0000160!3.01e-20!43;UBERON:0000344!4.42e-16!15;UBERON:0004119!2.18e-14!130;UBERON:0000925!2.18e-14!130;UBERON:0006595!2.18e-14!130;UBERON:0001007!3.21e-14!128;UBERON:0001555!3.21e-14!128;UBERON:0007026!3.21e-14!128;UBERON:0001242!7.52e-14!13;UBERON:0000060!7.52e-14!13;UBERON:0001262!7.52e-14!13;UBERON:0004786!7.52e-14!13;UBERON:0004921!8.45e-13!126;UBERON:0004185!8.45e-13!126;UBERON:0004923!1.87e-10!24;UBERON:0003350!1.01e-09!9;UBERON:0004808!1.01e-09!9;UBERON:0001277!1.01e-09!9;UBERON:0000485!1.79e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,7.11e-47,47;UBERON:0000160,7.63e-42,31;UBERON:0000344,9.51e-23,15;UBERON:0001242,1.30e-18,13;UBERON:0001262,1.30e-18,13;UBERON:0004786,1.30e-18,13;UBERON:0001007,3.88e-18,116;UBERON:0001555,3.88e-18,116;UBERON:0007026,3.88e-18,116;UBERON:0004119,1.09e-17,118;UBERON:0000925,1.09e-17,118;UBERON:0006595,1.09e-17,118;UBERON:0004921,7.96e-16,114;UBERON:0004923,4.53e-15,24;UBERON:0003350,5.52e-14,9;UBERON:0004808,5.52e-14,9;UBERON:0001277,5.52e-14,9;UBERON:0000485,3.48e-11,11;UBERON:0002108,5.69e-10,4;UBERON:0000331,4.06e-08,3;UBERON:0002116,4.06e-08,3;UBERON:0001204,4.06e-08,3;UBERON:0001168,4.06e-08,3;UBERON:0000945,1.67e-07,16;UBERON:0010039,1.67e-07,16 | |||
|phase1_expression=0,5.23463111459042,3.63999391511629,0.90739263392049,1.00179145989269,7.89032577985882,11.6806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,9.75953779039781,9.40578052375397,2.8711598205751,7.75371593086335,8.83432054012145,15.9619672343354,8.56902441183765,13.082100128663,0,0,0,4.62162591602039,4.15586613396231,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,1.37020655662872,0,0,0,0,0,0,0,0,2.71914464507811,0,0,0,0,0,14.9113408974498,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,3.70230793328962,0,0.232236671860439,0.77320476793256,3.42861991859682,1.77902435075896,2.47293313946327,4.2707615539006,4.28217282282428,5.7807098024062,3.58121649674071,5.26403035221624,4.49409704327111,9.72621224436124,12.7450414882795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.714130922658041,0,0.630540576424764,0.221464689648775,0.318909537314974,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.377210159511796,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.328281799490123,4.95517422270746,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0.158167996790568,0.203319467126849,1.83609079397062,3.76358932826044,4.80397640241591,4.18079473792944,4.54594006489348,12.3025292732494,39.402951880705,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.187283014939765,0.320125762024346,0.287177344778066,0.952587382566147,0.463537303779422,0,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.715308569841963,0,0.0941093804153306,0.338458431566706,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,5.23463111459042,3.63999391511629,0.90739263392049,1.00179145989269,7.89032577985882,11.6806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,9.75953779039781,9.40578052375397,2.8711598205751,7.75371593086335,8.83432054012145,15.9619672343354,8.56902441183765,13.082100128663,0,0,0,4.62162591602039,4.15586613396231,4.28755648150975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12355536105401,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,0.505524445014783,1.37020655662872,0,0,0,0,0,0,0,0,2.71914464507811,0,0,0,0,0,14.9113408974498,0,0,6.89734049063197,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420883711772948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,3.70230793328962,0,0.232236671860439,0.77320476793256,3.42861991859682,1.77902435075896,2.47293313946327,4.2707615539006,4.28217282282428,5.7807098024062,3.58121649674071,5.26403035221624,4.49409704327111,9.72621224436124,12.7450414882795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.714130922658041,0,0.630540576424764,0.221464689648775,0.318909537314974,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0.377210159511796,0,0,0.775284879504663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0.328281799490123,4.95517422270746,0,0,0,0,0,0,0,0,0,0,6.68269432610579,0.158167996790568,0.203319467126849,1.83609079397062,3.76358932826044,4.80397640241591,4.18079473792944,4.54594006489348,12.3025292732494,39.402951880705,3.10669656543463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0,0,0,0,0.505394423527595,0.25347929989024,0.188626341386076,0.187283014939765,0.320125762024346,0.287177344778066,0.952587382566147,0.463537303779422,0,0.412085900803307,0.441596760403192,0.342869252385415,0.354951612318675,0.715308569841963,0,0.0941093804153306,0.338458431566706,0,0.263069711437843,0.271608227691724,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0,0.233931608445408,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p2@Fam83e | |||
}} | }} |
Latest revision as of 21:50, 26 September 2015
Short description: | p2@Fam83e |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Fam83e_5end |
Coexpression cluster: | MCL_coexpression_mm9:314 |
Association with transcript: | 16bp_to_ENSMUST00000156689, NM_001033170, uc009gwx.1, uc009gwy.1_5end |
EntrezGene: | Fam83e |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.52e-14 | 9 |
epithelial cell of alimentary canal | 5.52e-14 | 9 |
brush border epithelial cell | 8.51e-09 | 6 |
gut absorptive cell | 8.51e-09 | 6 |
enterocyte | 8.51e-09 | 6 |
epithelial cell | 3.73e-08 | 25 |
endo-epithelial cell | 7.84e-08 | 15 |
columnar/cuboidal epithelial cell | 1.75e-07 | 7 |
M cell of gut | 3.57e-07 | 3 |
intestinal crypt stem cell | 7.35e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 7.11e-47 | 47 |
intestine | 7.63e-42 | 31 |
mucosa | 9.51e-23 | 15 |
intestinal mucosa | 1.30e-18 | 13 |
wall of intestine | 1.30e-18 | 13 |
gastrointestinal system mucosa | 1.30e-18 | 13 |
digestive system | 3.88e-18 | 116 |
digestive tract | 3.88e-18 | 116 |
primitive gut | 3.88e-18 | 116 |
endoderm-derived structure | 1.09e-17 | 118 |
endoderm | 1.09e-17 | 118 |
presumptive endoderm | 1.09e-17 | 118 |
subdivision of digestive tract | 7.96e-16 | 114 |
organ component layer | 4.53e-15 | 24 |
epithelium of mucosa | 5.52e-14 | 9 |
gastrointestinal system epithelium | 5.52e-14 | 9 |
intestinal epithelium | 5.52e-14 | 9 |
simple columnar epithelium | 3.48e-11 | 11 |
small intestine | 5.69e-10 | 4 |
ileal mucosa | 4.06e-08 | 3 |
ileum | 4.06e-08 | 3 |
mucosa of small intestine | 4.06e-08 | 3 |
wall of small intestine | 4.06e-08 | 3 |
stomach | 1.67e-07 | 16 |
food storage organ | 1.67e-07 | 16 |