FFCP PHASE1:Mm9::chr7:112544295..112544315,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1682 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:112544295..112544315,- | |||
|description=CAGE_peak_at_chr7:112544295..112544315,- | |||
|id=chr7:112544295..112544315,- | |||
|ontology_enrichment_celltype=CL:0000239!5.43e-08!6;CL:0000677!5.43e-08!6;CL:0000212!5.43e-08!6;CL:0000584!5.43e-08!6;CL:0002563!5.66e-08!9;CL:0002251!5.66e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.98e-11,6;CL:0000677,1.98e-11,6;CL:0000584,1.98e-11,6;CL:0000075,9.64e-10,7;CL:0000682,1.26e-08,3;CL:0002563,1.72e-07,9;CL:0002251,1.72e-07,9;CL:0000066,3.76e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.97e-19!43;UBERON:0005409!2.53e-16!59;UBERON:0000344!1.90e-14!15;UBERON:0001242!1.71e-12!13;UBERON:0000060!1.71e-12!13;UBERON:0001262!1.71e-12!13;UBERON:0004786!1.71e-12!13;UBERON:0004923!1.09e-10!24;UBERON:0003350!5.66e-08!9;UBERON:0004808!5.66e-08!9;UBERON:0001277!5.66e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.05e-44,31;UBERON:0005409,4.26e-30,47;UBERON:0000344,5.41e-20,15;UBERON:0001242,5.31e-16,13;UBERON:0001262,5.31e-16,13;UBERON:0004786,5.31e-16,13;UBERON:0001007,5.89e-12,116;UBERON:0001555,5.89e-12,116;UBERON:0007026,5.89e-12,116;UBERON:0004119,1.19e-11,118;UBERON:0000925,1.19e-11,118;UBERON:0006595,1.19e-11,118;UBERON:0004923,1.26e-11,24;UBERON:0002108,5.50e-11,4;UBERON:0004921,4.06e-10,114;UBERON:0000331,5.76e-09,3;UBERON:0002116,5.76e-09,3;UBERON:0001204,5.76e-09,3;UBERON:0001168,5.76e-09,3;UBERON:0003350,1.72e-07,9;UBERON:0004808,1.72e-07,9;UBERON:0001277,1.72e-07,9;UBERON:0001911,7.15e-07,2;UBERON:0000076,7.15e-07,2;UBERON:0005333,7.15e-07,2;UBERON:0008425,7.15e-07,2;UBERON:0005311,7.15e-07,2 | |||
|phase1_expression=0,7.67745896806594,5.0049916332849,10.8887116070459,11.0197060588196,1.17515490338323,0.934450562382103,0.129123323441576,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0,3.35984087866154,3.67054849707472,4.59385571292016,5.1691439539089,4.52489588640367,7.22088993934221,7.05684363327806,4.6563407237614,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,2.03991400112325,0,0,0,0.561777680527007,0,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0.79928715803342,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2342386214491,7.1401652999157,0,0,0.515469845288373,2.8235693447268,4.00280478920767,5.89699440948933,7.59246498471219,4.28217282282428,5.02670417600539,4.37704238490532,4.09424582950152,3.59527763461689,3.8904848977445,3.78368419183298,0,0,0,0.203651327845314,0,0.210407459670956,0.126473074248515,0.295220295959204,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,15.7364567366092,7.17435540392304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,3.20628920292836,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.655087691238533,0,0,0.26175594198403,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0,0.188626341386076,0.280924522409647,0.384150914429216,0.229741875822453,0,0.347652977834566,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.592302255241736,0.365855945745545,0.263069711437843,0.407412341537585,1.12228454331548,0.237270036248348,0.197008964751127,0,0,0.771626443924566,0,0.467863216890817,0.214871054048298,0,0,0 | |phase1_expression=0,7.67745896806594,5.0049916332849,10.8887116070459,11.0197060588196,1.17515490338323,0.934450562382103,0.129123323441576,0.140788722151667,0,0,0.0797721589953364,0.171200729931206,0.0874204024189974,0,0,0,0,0,0,0,0,0,3.35984087866154,3.67054849707472,4.59385571292016,5.1691439539089,4.52489588640367,7.22088993934221,7.05684363327806,4.6563407237614,0,0,0,0.288851619751275,0,0.408338712524738,0,0,0.523523743973798,0.588231488031014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,2.03991400112325,0,0,0,0.561777680527007,0,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0.79928715803342,0,0,0,0,0,0,0,0,0.494389935468748,0,0,0,0,0,1.86391761218122,0,0,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.2342386214491,7.1401652999157,0,0,0.515469845288373,2.8235693447268,4.00280478920767,5.89699440948933,7.59246498471219,4.28217282282428,5.02670417600539,4.37704238490532,4.09424582950152,3.59527763461689,3.8904848977445,3.78368419183298,0,0,0,0.203651327845314,0,0.210407459670956,0.126473074248515,0.295220295959204,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0,15.7364567366092,7.17435540392304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0.21183207086382,0,0,0,0,0,0,3.20628920292836,0,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.655087691238533,0,0,0.26175594198403,1.68499465279331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.412070114477788,0.320919209591815,0.252697211763798,0,0.188626341386076,0.280924522409647,0.384150914429216,0.229741875822453,0,0.347652977834566,0,0,0.294397840268795,0.685738504770831,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.592302255241736,0.365855945745545,0.263069711437843,0.407412341537585,1.12228454331548,0.237270036248348,0.197008964751127,0,0,0.771626443924566,0,0.467863216890817,0.214871054048298,0,0,0 | ||
|short_description=p@chr7:112544295..112544315,- | |||
}} | }} |
Latest revision as of 23:46, 3 August 2015
Short description: | p@chr7:112544295..112544315, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:112544295..112544315, - |
Coexpression cluster: | MCL_coexpression_mm9:1682 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.98e-11 | 6 |
gut absorptive cell | 1.98e-11 | 6 |
enterocyte | 1.98e-11 | 6 |
columnar/cuboidal epithelial cell | 9.64e-10 | 7 |
M cell of gut | 1.26e-08 | 3 |
intestinal epithelial cell | 1.72e-07 | 9 |
epithelial cell of alimentary canal | 1.72e-07 | 9 |
epithelial cell | 3.76e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.05e-44 | 31 |
gastrointestinal system | 4.26e-30 | 47 |
mucosa | 5.41e-20 | 15 |
intestinal mucosa | 5.31e-16 | 13 |
wall of intestine | 5.31e-16 | 13 |
gastrointestinal system mucosa | 5.31e-16 | 13 |
digestive system | 5.89e-12 | 116 |
digestive tract | 5.89e-12 | 116 |
primitive gut | 5.89e-12 | 116 |
endoderm-derived structure | 1.19e-11 | 118 |
endoderm | 1.19e-11 | 118 |
presumptive endoderm | 1.19e-11 | 118 |
organ component layer | 1.26e-11 | 24 |
small intestine | 5.50e-11 | 4 |
subdivision of digestive tract | 4.06e-10 | 114 |
ileal mucosa | 5.76e-09 | 3 |
ileum | 5.76e-09 | 3 |
mucosa of small intestine | 5.76e-09 | 3 |
wall of small intestine | 5.76e-09 | 3 |
epithelium of mucosa | 1.72e-07 | 9 |
gastrointestinal system epithelium | 1.72e-07 | 9 |
intestinal epithelium | 1.72e-07 | 9 |
mammary gland | 7.15e-07 | 2 |
external ectoderm | 7.15e-07 | 2 |
mammary bud | 7.15e-07 | 2 |
mammary ridge | 7.15e-07 | 2 |
mammary placode | 7.15e-07 | 2 |