FFCP PHASE1:Mm9::chr2:24331116..24331125,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:24331116..24331125,- to FFCP PHASE1:Mm9::chr2:24331116..24331125,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=18510 | |EntrezGene=18510 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q00288 | |UniProt=Q00288 | ||
|association_with_transcript=0bp_to_ENSMUST00000028355_5end | |||
|cluster_id=chr2:24331116..24331125,- | |||
|description=CAGE_peak_2_at_Pax8_5end | |||
|id=chr2:24331116..24331125,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002611,2.98e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!1.59e-23!21;UBERON:0002113!3.01e-18!14;UBERON:0003918!3.01e-18!14;UBERON:0005095!3.01e-18!14;UBERON:0007687!3.01e-18!14;UBERON:0001008!1.39e-16!17;UBERON:0006554!2.38e-15!16;UBERON:0004175!2.88e-09!9;UBERON:0005156!3.75e-09!26;UBERON:0000990!3.75e-09!26;UBERON:0003133!6.71e-09!24;UBERON:0002240!4.03e-08!6;UBERON:0005174!4.03e-08!6;UBERON:0001137!4.03e-08!6;UBERON:0000474!4.28e-08!9;UBERON:0003103!5.15e-08!43;UBERON:0003134!3.72e-07!8;UBERON:0001948!3.86e-07!5;UBERON:0002315!3.86e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000489,1.62e-43,21;UBERON:0002113,1.65e-37,14;UBERON:0003918,1.65e-37,14;UBERON:0011143,1.65e-37,14;UBERON:0005095,1.65e-37,14;UBERON:0007687,1.65e-37,14;UBERON:0001008,1.77e-37,19;UBERON:0006554,4.45e-34,18;UBERON:0003103,9.15e-20,43;UBERON:0004175,1.13e-14,9;UBERON:0003975,2.16e-12,5;UBERON:0001948,5.18e-12,5;UBERON:0002315,5.18e-12,5;UBERON:0003076,1.61e-10,12;UBERON:0003057,1.61e-10,12;UBERON:0002240,4.94e-10,6;UBERON:0005174,4.94e-10,6;UBERON:0001137,4.94e-10,6;UBERON:0005172,3.60e-09,49;UBERON:0005173,3.60e-09,49;UBERON:0002417,3.60e-09,49;UBERON:0000916,3.60e-09,49;UBERON:0005795,4.74e-09,4;UBERON:0000995,4.74e-09,4;UBERON:0003104,2.66e-08,61;UBERON:0009142,2.66e-08,61;UBERON:0002256,2.98e-08,2;UBERON:0001896,3.52e-08,2;UBERON:0002298,3.52e-08,2;UBERON:0005290,3.52e-08,2;UBERON:0010096,3.52e-08,2;UBERON:0003134,8.81e-08,8;UBERON:0000474,6.35e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.972149495371417,0,0,0,0,0,0,0,0,0.404632921719196,0,1.90149421051854,0.338844532069132,0,0,0,0,0,0,0,0,0,1.99955689082663,1.98781686856452,0,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0,0,0.883885756421003,1.42371680799103,2.79599168737951,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0.461230994512117,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0,0.916554274652847,0.995255764880744,4.54900965180614,0,0,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03468641524931,2.51346727741403,4.50830942692322,2.8511185898344,1.93952487167626,3.50679099451593,3.16182685621286,2.36176236767363,2.04098346193787,1.97435462274881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.651547837414304,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0.304464949114599,0,8.26145076368899,0,0,0,0,0,0,0,0.927126510052548,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31377732815827,2.01466786693992,2.57242054894879,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0.341467211508268,0,0,0,0,0.618105171716683,0,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.115884325944855,0.38581844092741,0.412085900803307,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.365855945745545,0.526139422875686,0.135804113845862,0,0.474540072496697,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659058548203415,0.972149495371417,0,0,0,0,0,0,0,0,0.404632921719196,0,1.90149421051854,0.338844532069132,0,0,0,0,0,0,0,0,0,1.99955689082663,1.98781686856452,0,0,0,1.10115880999389,0.255374676170375,0.153606533256243,0,0,0,0.279182999001381,0,0,0.883885756421003,1.42371680799103,2.79599168737951,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0.461230994512117,0,0,0,0.988779870937496,0,0,0,0,0,0,0,0,0,0,0,0,0.299581278809645,0,0,0,0,0.20778804455956,0,0.916554274652847,0.995255764880744,4.54900965180614,0,0,0,0,0,0,0.12811372028485,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03468641524931,2.51346727741403,4.50830942692322,2.8511185898344,1.93952487167626,3.50679099451593,3.16182685621286,2.36176236767363,2.04098346193787,1.97435462274881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.40654023910644,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.35613120733451,0.651547837414304,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0.177340233642274,0,0,0.304464949114599,0,8.26145076368899,0,0,0,0,0,0,0,0.927126510052548,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299033092087958,0.165458490457098,0,0,0,0.234714477291508,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31377732815827,2.01466786693992,2.57242054894879,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.798049746802062,0.341467211508268,0,0,0,0,0.618105171716683,0,0.505394423527595,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.115884325944855,0.38581844092741,0.412085900803307,0,0,0,0.238436189947321,0,0.188218760830661,0.0846146078916765,0.365855945745545,0.526139422875686,0.135804113845862,0,0.474540072496697,0.0985044823755635,0.818462086339379,0.154936841185966,0,0.249810577937946,0.233931608445408,0.214871054048298,0.57386499620653,0,0 | ||
|short_description=p2@Pax8 | |||
}} | }} |
Latest revision as of 09:43, 26 September 2015
Short description: | p2@Pax8 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pax8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000028355_5end |
EntrezGene: | Pax8 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of the dorsal spinal cord | 2.98e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
cavitated compound organ | 1.62e-43 | 21 |
kidney | 1.65e-37 | 14 |
kidney mesenchyme | 1.65e-37 | 14 |
upper urinary tract | 1.65e-37 | 14 |
kidney rudiment | 1.65e-37 | 14 |
kidney field | 1.65e-37 | 14 |
renal system | 1.77e-37 | 19 |
urinary system structure | 4.45e-34 | 18 |
compound organ | 9.15e-20 | 43 |
internal genitalia | 1.13e-14 | 9 |
internal female genitalia | 2.16e-12 | 5 |
regional part of spinal cord | 5.18e-12 | 5 |
gray matter of spinal cord | 5.18e-12 | 5 |
posterior neural tube | 1.61e-10 | 12 |
chordal neural plate | 1.61e-10 | 12 |
spinal cord | 4.94e-10 | 6 |
dorsal region element | 4.94e-10 | 6 |
dorsum | 4.94e-10 | 6 |
abdomen element | 3.60e-09 | 49 |
abdominal segment element | 3.60e-09 | 49 |
abdominal segment of trunk | 3.60e-09 | 49 |
abdomen | 3.60e-09 | 49 |
embryonic uterus | 4.74e-09 | 4 |
uterus | 4.74e-09 | 4 |
mesenchyme | 2.66e-08 | 61 |
entire embryonic mesenchyme | 2.66e-08 | 61 |
dorsal horn of spinal cord | 2.98e-08 | 2 |
medulla oblongata | 3.52e-08 | 2 |
brainstem | 3.52e-08 | 2 |
myelencephalon | 3.52e-08 | 2 |
future myelencephalon | 3.52e-08 | 2 |
female reproductive organ | 8.81e-08 | 8 |
female reproductive system | 6.35e-07 | 9 |