FFCP PHASE1:Mm9::chr1:137715448..137715477,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr1:137715448..137715477,+ to FFCP PHASE1:Mm9::chr1:137715448..137715477,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16763 | |EntrezGene=16763 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=P57016 | |UniProt=P57016 | ||
|association_with_transcript=273bp_to_ENSMUST00000038760,NM_133664,uc007ctt.1_5end | |||
|cluster_id=chr1:137715448..137715477,+ | |||
|description=CAGE_peak_4_at_Lad1_5end | |||
|id=chr1:137715448..137715477,+ | |||
|ontology_enrichment_celltype=CL:0002563!8.82e-07!9;CL:0002251!8.82e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,3.57e-10,15;CL:0002563,1.46e-09,9;CL:0002251,1.46e-09,9;CL:0000239,1.74e-09,6;CL:0000677,1.74e-09,6;CL:0000584,1.74e-09,6;CL:0000066,9.08e-09,25;CL:0000075,5.93e-08,7;CL:0000223,6.81e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.26e-14!59;UBERON:0000160!1.58e-13!43;UBERON:0004119!1.40e-11!130;UBERON:0000925!1.40e-11!130;UBERON:0006595!1.40e-11!130;UBERON:0001007!7.42e-11!128;UBERON:0001555!7.42e-11!128;UBERON:0007026!7.42e-11!128;UBERON:0000344!1.88e-10!15;UBERON:0004921!5.84e-10!126;UBERON:0004185!5.84e-10!126;UBERON:0001242!3.25e-09!13;UBERON:0000060!3.25e-09!13;UBERON:0001262!3.25e-09!13;UBERON:0004786!3.25e-09!13;UBERON:0004923!3.70e-07!24;UBERON:0003350!8.82e-07!9;UBERON:0004808!8.82e-07!9;UBERON:0001277!8.82e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.75e-29,31;UBERON:0005409,5.59e-29,47;UBERON:0000344,2.15e-16,15;UBERON:0004119,6.00e-16,118;UBERON:0000925,6.00e-16,118;UBERON:0006595,6.00e-16,118;UBERON:0001007,9.89e-15,116;UBERON:0001555,9.89e-15,116;UBERON:0007026,9.89e-15,116;UBERON:0001242,4.40e-14,13;UBERON:0001262,4.40e-14,13;UBERON:0004786,4.40e-14,13;UBERON:0004921,3.09e-13,114;UBERON:0004923,2.82e-11,24;UBERON:0003350,1.46e-09,9;UBERON:0004808,1.46e-09,9;UBERON:0001277,1.46e-09,9;UBERON:0000485,1.75e-07,11;UBERON:0000014,8.85e-07,5;UBERON:0001003,8.85e-07,5;UBERON:0002097,8.85e-07,5;UBERON:0002199,8.85e-07,5;UBERON:0007029,8.85e-07,5;UBERON:0007376,8.85e-07,5;UBERON:0002416,8.85e-07,5;UBERON:0007383,8.85e-07,5 | |||
|phase1_expression=0,16.40184415905,10.9199817453489,10.8887116070459,10.5188103288733,6.88305014838748,5.37309073369709,1.80772652818207,0.703943610758334,1.63845168425395,12.8413476169129,15.6353431630859,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.595303031057488,0,0,7.03966660290989,5.50582274561208,15.5042630311055,7.75371593086335,6.46413698057667,6.65081968097309,7.30887376303799,4.21287970245079,0,0,0,0.866554859253824,2.99222361645286,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0.395658863190582,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.704217098883403,0,0,0,8.01016851741492,8.61423542615335,9.0994400102661,0.91347103775248,0.517875767294343,0,0,0,0.461230994512117,0,0,0,0.988779870937496,0,0,0,0,0,7.45567044872489,0,0,5.36459815938042,0,0,0,0,0,0,0,0.255715457330331,0,0,0.203678727700633,0.248813941220186,1.0108910337347,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,2.43776516565517,1.4404749548556,0,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,5.94753809370836,5.02456076660734,0.426576501070468,0.928946687441754,1.9330119198314,4.63872106633688,5.55945109612176,8.94060442729028,7.11793592316767,6.42325923423642,6.28338022000674,6.56556357735798,6.82374304916921,1.79763881730844,2.37751854862164,3.78368419183298,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0.581857461502877,0.701358198903186,0.69560190836683,2.36176236767363,2.511979645462,2.71473760627961,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0,0,0,0.162964976442026,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0,0,0.159454768657487,0.81931657357869,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0.728341908464944,0.604647113929502,0,0.590603785761546,0,1.80899805217755,0.363533729477506,0,0,0,0,0,0,0.388076051348264,0.214337035031592,0.177340233642274,0,0,0,1.40803024838226,1.90648863777438,0.220528398054962,5.7710188529518,2.42196640043858,2.47282992205439,7.28171298419132,7.38634048852776,6.12109756922687,0,0,0.412773735926445,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,1.21991680276109,1.51207477150522,3.3454127362315,3.05707589244649,4.18079473792944,3.55409859618945,3.66458318777641,4.79575401179634,0,0,0,0,0.388902376688095,0.258319646955462,0,0,0.13020438484395,0,0.241584120826006,0,0.632022241256357,0.405450430580328,0.102710957164827,0.25984164595559,0.179026695667481,0.596044064343795,0.240390899039938,0.443068581523732,0.504832249740738,0.304827226619999,0.201652370273681,1.07203668813728,0.769694733122636,0.701261413089414,9.29594572822367,2.88581739386284,0.986852422704233,3.69346156000973,0.386379188064381,0.750729901804728,1.46521299413812,13.5052078819811,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,1.10306105070008,0,0,0.64183841918363,0.505394423527595,0.50695859978048,0.754505365544305,0.655490552289177,0.768301828858431,0.459483751644906,0.952587382566147,0.579421629724277,0.578727661391115,0.824171801606613,0.588795680537589,0.685738504770831,0.70990322463735,0.238436189947321,0.436039249896986,0.376437521661322,0.676916863133412,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,1.28055827088233,0.818462086339379,0.154936841185966,0.964533054905707,0.999242311751784,0.935726433781634,1.07435527024149,0.382576664137687,0.220591419119515,0.231867835620421 | |phase1_expression=0,16.40184415905,10.9199817453489,10.8887116070459,10.5188103288733,6.88305014838748,5.37309073369709,1.80772652818207,0.703943610758334,1.63845168425395,12.8413476169129,15.6353431630859,0,0.0874204024189974,0,0,0,0.157731082679119,0,0,0.595303031057488,0,0,7.03966660290989,5.50582274561208,15.5042630311055,7.75371593086335,6.46413698057667,6.65081968097309,7.30887376303799,4.21287970245079,0,0,0,0.866554859253824,2.99222361645286,1.63335485009895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307213066512487,0.395658863190582,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0.704217098883403,0,0,0,8.01016851741492,8.61423542615335,9.0994400102661,0.91347103775248,0.517875767294343,0,0,0,0.461230994512117,0,0,0,0.988779870937496,0,0,0,0,0,7.45567044872489,0,0,5.36459815938042,0,0,0,0,0,0,0,0.255715457330331,0,0,0.203678727700633,0.248813941220186,1.0108910337347,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0,0,0.431135985865684,0.189106080167819,0.175951124163949,0.219195732427575,0.834141747676794,2.43776516565517,1.4404749548556,0,0,0,0,0.207125772535502,0.469052119962192,0.36012412292203,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,5.94753809370836,5.02456076660734,0.426576501070468,0.928946687441754,1.9330119198314,4.63872106633688,5.55945109612176,8.94060442729028,7.11793592316767,6.42325923423642,6.28338022000674,6.56556357735798,6.82374304916921,1.79763881730844,2.37751854862164,3.78368419183298,0.189667900953082,0.228497025219458,1.1270773567308,0.407302655690628,0.581857461502877,0.701358198903186,0.69560190836683,2.36176236767363,2.511979645462,2.71473760627961,0,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0.744281895337007,0,0,0.179397413521912,0,0,0,0.162964976442026,0.339490171550376,0,0.335012514883631,0,0.195133647857799,0,0,0.159454768657487,0.81931657357869,0.172684981865896,0.289298117163023,0,0,0.491764273019036,0.275936746304732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.659880491890142,0,0.728341908464944,0.604647113929502,0,0.590603785761546,0,1.80899805217755,0.363533729477506,0,0,0,0,0,0,0.388076051348264,0.214337035031592,0.177340233642274,0,0,0,1.40803024838226,1.90648863777438,0.220528398054962,5.7710188529518,2.42196640043858,2.47282992205439,7.28171298419132,7.38634048852776,6.12109756922687,0,0,0.412773735926445,0,0,0,0,0,0,0,0.954670618015114,0.316335993581135,1.21991680276109,1.51207477150522,3.3454127362315,3.05707589244649,4.18079473792944,3.55409859618945,3.66458318777641,4.79575401179634,0,0,0,0,0.388902376688095,0.258319646955462,0,0,0.13020438484395,0,0.241584120826006,0,0.632022241256357,0.405450430580328,0.102710957164827,0.25984164595559,0.179026695667481,0.596044064343795,0.240390899039938,0.443068581523732,0.504832249740738,0.304827226619999,0.201652370273681,1.07203668813728,0.769694733122636,0.701261413089414,9.29594572822367,2.88581739386284,0.986852422704233,3.69346156000973,0.386379188064381,0.750729901804728,1.46521299413812,13.5052078819811,0.501572104035363,0,0,0,0,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0.170733605754134,0,0.209613162627982,1.10306105070008,0,0,0.64183841918363,0.505394423527595,0.50695859978048,0.754505365544305,0.655490552289177,0.768301828858431,0.459483751644906,0.952587382566147,0.579421629724277,0.578727661391115,0.824171801606613,0.588795680537589,0.685738504770831,0.70990322463735,0.238436189947321,0.436039249896986,0.376437521661322,0.676916863133412,0.548783918618318,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,1.28055827088233,0.818462086339379,0.154936841185966,0.964533054905707,0.999242311751784,0.935726433781634,1.07435527024149,0.382576664137687,0.220591419119515,0.231867835620421 | ||
|short_description=p4@Lad1 | |||
}} | }} |
Latest revision as of 10:57, 26 September 2015
Short description: | p4@Lad1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lad1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 273bp_to_ENSMUST00000038760, NM_133664, uc007ctt.1_5end |
EntrezGene: | Lad1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 3.57e-10 | 15 |
intestinal epithelial cell | 1.46e-09 | 9 |
epithelial cell of alimentary canal | 1.46e-09 | 9 |
brush border epithelial cell | 1.74e-09 | 6 |
gut absorptive cell | 1.74e-09 | 6 |
enterocyte | 1.74e-09 | 6 |
epithelial cell | 9.08e-09 | 25 |
columnar/cuboidal epithelial cell | 5.93e-08 | 7 |
endodermal cell | 6.81e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.75e-29 | 31 |
gastrointestinal system | 5.59e-29 | 47 |
mucosa | 2.15e-16 | 15 |
endoderm-derived structure | 6.00e-16 | 118 |
endoderm | 6.00e-16 | 118 |
presumptive endoderm | 6.00e-16 | 118 |
digestive system | 9.89e-15 | 116 |
digestive tract | 9.89e-15 | 116 |
primitive gut | 9.89e-15 | 116 |
intestinal mucosa | 4.40e-14 | 13 |
wall of intestine | 4.40e-14 | 13 |
gastrointestinal system mucosa | 4.40e-14 | 13 |
subdivision of digestive tract | 3.09e-13 | 114 |
organ component layer | 2.82e-11 | 24 |
epithelium of mucosa | 1.46e-09 | 9 |
gastrointestinal system epithelium | 1.46e-09 | 9 |
intestinal epithelium | 1.46e-09 | 9 |
simple columnar epithelium | 1.75e-07 | 11 |
zone of skin | 8.85e-07 | 5 |
skin epidermis | 8.85e-07 | 5 |
skin of body | 8.85e-07 | 5 |
integument | 8.85e-07 | 5 |
surface | 8.85e-07 | 5 |
outer epithelium | 8.85e-07 | 5 |
integumental system | 8.85e-07 | 5 |
enveloping layer of ectoderm | 8.85e-07 | 5 |